LOC120561043


Basic Information

Item Value
gene id LOC120561043
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 23352950 ~ 23354264 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804011.1
TTAGACTCACACAACTTCAACTCCAGACACATTTATTGGTACTCAAATTTGGTAAgatgatttatttatgtttagGCAAGTCTAAAAAATAGATCAACCACAAGACTCCTTAAATACCTCCTGCCTAACAACAGTGTCTCTCTCCAGCAGAGCGCAGGAAAACGACAGAAAAGGCACCTGAAAACTCAATAAAGAAGCAACAACTTAGTTAAATGATCATGAATGTGAAGAAGCAGCTGTGGTCCCTGGCCTGCATGGTCCTGCCTGGTGTGGGATTTGCGATGACCTGCACTGGGTCCTACCTGGTGTACCTGCAGATAACGTATGAGTACTCTATGAGGGTCGTCCCTGCCTACATCATGATTGTGTTGGGCATCCTGGCTGTGTTCATTGGAGTCTTCTGGTCTAACTGCCAAAGCATGAAGAGCAAGATGTACCTGAGAGGAGGACATGAACAGCACACCCAGGTCTACACTATTGAAAGACCGAGCTCATTCCCTCCATCGTACGAGGAATGCCATGGCAGCCAGGGGTGTCCTGGAACAGCCTCTGAGTCTGTTGTCGTGGTTGACGGGGTGGATGTGGTGATGAGCTTCGCTCCTCCTCTGTACAGCCAGGACAGCTCGGATGCTCCGGACTGCACATGGAGCTGGGAGCAGCCTCCTCGGTACAGTCAGGTGGAGCATATTCAGCAGGGAGAGGTGGACGTAGAGGAGCGGAGGGAGGCCTTGACCGGACACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804011.1 True 743 mRNA 0.50 2 23352950 23354264

Neighbor

gene id symbol gene type direction distance location
LOC120560302 zswim6 coding upstream 22402 23283079 ~ 23330548 (+)
ndufaf2 ndufaf2 coding upstream 79248 23257261 ~ 23273702 (+)
elac1 elac1 coding upstream 461931 22884588 ~ 22891019 (+)
me2 me2 coding upstream 469076 22862584 ~ 22883874 (+)
mapk4 mapk4 coding upstream 491077 22840502 ~ 22861873 (+)
dock8 dock8 coding downstream 53952 23408216 ~ 23487506 (+)
ercc6l2 ercc6l2,LOC105014104 coding downstream 350138 23704402 ~ 23722529 (+)
ipo11 ipo11,LOC102795548 coding downstream 400061 23754325 ~ 23906456 (+)
si:dkey-250l23.4 rnf180,LOC104964874 coding downstream 638389 23992653 ~ 24000805 (+)
rgs7bpa rgs7bp coding downstream 649818 24004082 ~ 24013484 (+)
G63976 smim15,LOC106580593,LOC103398561 non-coding upstream 71841 23274920 ~ 23281109 (+)
LOC120560300 NA non-coding upstream 107582 23219850 ~ 23245368 (+)
G63914 NA non-coding upstream 364910 22987181 ~ 22988040 (+)
G63872 NA non-coding upstream 446984 22904035 ~ 22905966 (+)
G63792 NA non-coding upstream 1202826 22131884 ~ 22150124 (+)
G64026 NA non-coding downstream 76426 23430690 ~ 23432473 (+)
LOC120560908 NA non-coding downstream 77217 23431481 ~ 23443313 (+)
G64127 NA non-coding downstream 380560 23734824 ~ 23735293 (+)
G64130 NA non-coding downstream 390675 23744939 ~ 23749835 (+)
G64172 NA non-coding downstream 660814 24015078 ~ 24017068 (+)
G63905 NA other upstream 422745 22929899 ~ 22930205 (+)
LOC120560787 NA other upstream 1753661 21588876 ~ 21599289 (+)
G63480 rbm19 other upstream 2675034 20676417 ~ 20677916 (+)
wdr31 wdr31,LOC102796061 other upstream 2862364 20473651 ~ 20490586 (+)
vps13a vps13a other upstream 2910857 20400947 ~ 20442093 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other downstream 133703 23487967 ~ 23562285 (+)
G64108 NA other downstream 338398 23692662 ~ 23693291 (+)
prxl2c aaed1 other downstream 1467050 24821314 ~ 24823066 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other downstream 1469454 24823718 ~ 24837448 (+)
LOC120561182 LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747 other downstream 2330700 25684964 ~ 25696576 (+)

Expression


Co-expression Network