LOC120561053


Basic Information

Item Value
gene id LOC120561053
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 26793691 ~ 26794572 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804019.1
ATGCTCATCTCTAACATCACAGCAGCTGGAAGAGTACAACTCTCGGTGAACTTCCACAGTCCTGTTGATTATCtcacttttatttttcaactttcattcGCTACAACTGCTGTTCTGGTGGCTGCACCTGTAGTCATTACCATATTGGCCACCAGAGCTCTCCGCCTCCAAAACAGGTTCATGTTCATGCTGAACACTAGCATTAGTGATACGTTGGTTGGGTTTTCTGTGTATTATCTCGGTCTGTTTGACGTTCAAGAAGGATATCCTTCGAGAAATGGAACGTATAATATGTTACCTTCTCTTCTTGGGGTAAacattatgacatttttatttgccCAGTTTGACCGGTATTTTGCCGTTTGTCATCCATTCATCTACAGTCGCTATATAACCCGGCGGGTGGTTATATCTGCAAATGTCTATTGTTGGCTTCACGTCTATACTCAGTCGATCATTACAAATTTCGTGCCACTTTCCAAAGCAATGCAGGTGTATGTTTTCAGTATTGTCAGCTTACAATTAATTGTGTTCACAAAAGTGGTCATGACTATTAAACTGTATGTTATTGCAAGGTACCAGCTTAGCAGAGACCCTCCCAGCGCCGACAAAGACAGCAAGAAGGAGTCATTGAGAATCATTATTTTTGTTGTCATAAGCTTCTTAGTGTTGTGGTGTCCctcttttattaatattatcatCAGATTTATGGTAGGAGGAGGGCTGACGTTTAGGAACGAGGCCACCAATCTTTTCGCCATCATGGCTCGTTTTAACTCTGTGTGCACACCGTCTGTGTATATCTGGGGGAGTTCGGCTCTCAGGGAAGCCATGGTGAGGACAGTGTGGGGCAGACTGTGCCCAAGATGCAAGAGGAGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804019.1 True 882 mRNA 0.43 1 26793691 26794572

Neighbor

gene id symbol gene type direction distance location
LOC120561052 LOC104921679,LOC106580276,LOC105940836,LOC102302829,LOC106700476 coding upstream 2627 26790198 ~ 26791064 (+)
pi4kab pi4ka coding upstream 74575 26687332 ~ 26719116 (+)
si:dkey-178e17.3 sbspon,LOC103359527 coding upstream 113693 26666733 ~ 26679998 (+)
si:dkeyp-117b11.1 NA coding upstream 186057 26597995 ~ 26607634 (+)
plat plat coding upstream 196378 26585780 ~ 26597313 (+)
LOC120561461 LOC106926604,LOC102220481,LOC108166557,LOC108233617 coding downstream 3251 26797823 ~ 26799241 (+)
utp15 utp15 coding downstream 35479 26830051 ~ 26837172 (+)
LOC120560731 arhgef28,LOC104956788,LOC103359538 coding downstream 42700 26837272 ~ 26876951 (+)
osmr NA coding downstream 82461 26877033 ~ 26887826 (+)
gck gck coding downstream 107227 26901799 ~ 26907519 (+)
G64944 NA non-coding upstream 109436 26682518 ~ 26684255 (+)
G64930 NA non-coding upstream 130165 26662767 ~ 26663526 (+)
G64893 NA non-coding upstream 212878 26572244 ~ 26580813 (+)
G64841 enkd1,LOC102781555 non-coding upstream 253055 26540415 ~ 26540636 (+)
G64840 NA non-coding upstream 253468 26538658 ~ 26540223 (+)
G64967 ykt6 non-coding downstream 99129 26893701 ~ 26896143 (+)
LOC120560738 NA non-coding downstream 103330 26897902 ~ 26899558 (+)
G65083 NA non-coding downstream 405377 27199949 ~ 27200190 (+)
G65106 NA non-coding downstream 584426 27378998 ~ 27379215 (+)
G65108 NA non-coding downstream 594885 27389457 ~ 27389862 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other upstream 131796 26644661 ~ 26661895 (+)
cltcl1 LOC100691387,LOC103359525 other upstream 149524 26614237 ~ 26644167 (+)
c6h22orf39 clg12h22orf39 other upstream 296704 26494284 ~ 26496987 (+)
G64814 cldn5,LOC103357131 other upstream 379094 26412869 ~ 26414597 (+)
nsd3 whsc1l1 other upstream 409848 26359120 ~ 26383843 (+)
ndufs4 ndufs4 other downstream 217638 27012210 ~ 27039599 (+)
G65084 lipg other downstream 410662 27205234 ~ 27370959 (+)
mboat4 NA other downstream 2051054 28845626 ~ 28849471 (+)
ubac1 ubac1 other downstream 2550008 29344580 ~ 29351756 (+)
fbxo21 fbxo21 other downstream 3392276 30186848 ~ 30212108 (+)

Expression


Co-expression Network