zgc:158260


Basic Information

Item Value
gene id zgc:158260
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 29013606 ~ 29016925 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804024.1
tgttgtctcgtcaggagagatgcgccaccaGTACAAGGAGAGGTTGCAGACCAAGTATCATAAAGCCCCAGCAAACAAGATGTCGTTGATCGGTAGTTGTTGCCGTTTTGTAAACGTGAGCCTCGATGACTTCAGTGACTGCTCGTCAGTCTTATCCGGGGACCAGAAAGGTGTCTCACCAGTTATTTTTCATGACACTCCAAACCAGAACTCCAGTCAAAAGCATAAAAAGTGCACCTCTAAAGAACATGCTTGCTTTTCAAAGCAGATGATTCAAAAGCAGATTCGCAGGGAATATGTGGCTGCTGTGGAGGAAAAACTCAAACAGCATCCTCTGGCTATGTACCCACACTATAAGGATCATATGACCCCAGATCTATTTGATAAGGTGTTATCCGTCTTGGACCCAGACATGAGCGTTAACAGTGCCTCTGCACTTCCTACGCTTACAGGAGATGatgtggaggaggaagatgaggaaaACTGTACAGAGCCAAGTCAGGAAGAAGTGAGCAGAGCAAAACACAGAACTTCTGCTGATAAAACGCAAcagtaCTAA

Function

NR:

description
protein FAM47A-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804024.1 True 559 mRNA 0.46 4 29013606 29016925

Neighbor

gene id symbol gene type direction distance location
LOC120560307 LOC103366435,LOC100706955,LOC101475748 coding upstream 34120 28963413 ~ 28979486 (+)
LOC120561296 LOC104963268,LOC101073255 coding upstream 57778 28940542 ~ 28955828 (+)
hint2 hint2,LOC102195764,LOC100691034,LOC101473821 coding upstream 74964 28934966 ~ 28938642 (+)
emb NA coding upstream 85758 28918006 ~ 28927848 (+)
malt1 LOC102297700,LOC100707481,LOC102194418,LOC101473126,LOC102781556 coding upstream 96996 28902756 ~ 28916610 (+)
LOC120560871 ccng2,LOC102294549,LOC100696397,LOC102783398 coding downstream 19090 29036015 ~ 29040829 (+)
LOC120560378 st8sia3,LOC104919001,LOC100693561,LOC102785111,LOC102199258,LOC101477372 coding downstream 25015 29041940 ~ 29050224 (+)
zgc:152968 NA coding downstream 43822 29060747 ~ 29072167 (+)
ptgs1 LOC103362336 coding downstream 186568 29203493 ~ 29214795 (+)
LOC120561007 NA coding downstream 203929 29220854 ~ 29223680 (+)
G65473 NA non-coding upstream 11426 28985613 ~ 29002180 (+)
G65418 NA non-coding upstream 197206 28816185 ~ 28816400 (+)
G65417 NA non-coding upstream 198130 28815254 ~ 28815476 (+)
G65396 NA non-coding upstream 247381 28766020 ~ 28766225 (+)
G65394 NA non-coding upstream 257413 28755865 ~ 28756193 (+)
LOC120560778 NA non-coding downstream 56016 29072941 ~ 29131216 (+)
G65565 LOC108233773,LOC103375797 non-coding downstream 61501 29078426 ~ 29098313 (+)
G65570 NA non-coding downstream 87063 29103988 ~ 29105609 (+)
G65710 NA non-coding downstream 530524 29547449 ~ 29614880 (+)
G65713 NA non-coding downstream 572082 29589007 ~ 29591364 (+)
mboat4 NA other upstream 164135 28845626 ~ 28849471 (+)
G65084 lipg other upstream 1642647 27205234 ~ 27370959 (+)
ndufs4 ndufs4 other upstream 1974007 27012210 ~ 27039599 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other upstream 2351711 26644661 ~ 26661895 (+)
cltcl1 LOC100691387,LOC103359525 other upstream 2369439 26614237 ~ 26644167 (+)
ubac1 ubac1 other downstream 327655 29344580 ~ 29351756 (+)
fbxo21 fbxo21 other downstream 1169923 30186848 ~ 30212108 (+)
LOC120560820 NA other downstream 1229962 30246887 ~ 30251519 (+)
G65899 taok3 other downstream 1557161 30574086 ~ 30578159 (+)
LOC120561064 NA other downstream 1840655 30857580 ~ 30893280 (+)

Expression


Co-expression Network