LOC120561082


Basic Information

Item Value
gene id LOC120561082
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 35200417 ~ 35209715 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804040.1
ATGagtgtggtgtttccattgctttcacctccattactttctgaaaaacacgGAGATACAATCATATCCTGTCAGGGAATCTTCAACCCTGCAGCTGTCCTCAACATAACAGCTAGGATCAAAAACTACATGATGGGGAGGGAGGTCTGGTCCCAGCCTCATACCGTATTTCTTTATGATGCAGTCAAACCCTTTCAGCCTGTATTAACTGTACTTGGCTCCACTGAGGACTCTATTGTTGTGTCTTGGAGAAGCAATGTTGGTGACGGCAGTTGTCGGCTTCGCTACAGAGACAACAACACTCACACATGGACCCAGGCACCAGATTACGTCCCTGCACATCAATATCAGACACTGACCTACACGATCACAGACCTCCTGACGTTTACGGTCTACAGAGCTGCTGTTGCCTGCAGAGAGGACTCCGGCATCTGGACCGACTGGAGTTCTGACGTCAGCACGAGGACGCTGGACAGAGTGCCCTCCAGGCCTCCAGAGGTGTGTTACAGAGAGGAGACAACAGACTCTGGTGGATCTTTTCTCCTTCATCTCATGTGGAAGGACCTTGACCTCCGTGATGCCGGAGGTCGTATCCTTGgataccaggtgagctacaagCCAGTGAAGAAGCAGCAGCTCCAGGACAGAATAATTCAAAATGTCACAGACGTGACGGCGCTCCTGGTGGtggaagaggggaactgcagtgTCACAGTTACTGCCTTCAATACGGCCGGCTGTGGACCTGCTGCACATCTCCGcattgacacacaaacacagaacaCTCTCCCGTCAGTCAGAAGCTTATGGGTGTCCAGTTCTTTCCCGGCTATGAAGGGCCTACTGGTCCAATGGGAGAGCCCCACAGCCTCGCCCTCTGTCCCGCCTGTCAGTCATTTTGCTGTTCAGGGGCGCGCCGAGACTCGTCCATCCACCAGCCGCTGGACCACAGTGGACTACAACACCACCTCCACTGTCATACGAGATGTTGACCCTGATGAGTCCTACCTGatcagtgtgttccccatctaCCCCCATCAGCAGTGTGGATCTCCTCAGTTGCTGCCTGCCAATCTGCAGCAAGGAGCACTGATGGAGCCGGTCCAACTGAAGGTGGGGGTCGTGACCAAAACCACAGTGACAGTGGTGTGGGTGTGGCAAAGGAAGGCTGGACCAATCAGAGTGAACAGATACAGAGTCATGCTGACAAAAGAATCGGAGAGCAAAACACTGTCTTTGTGGCCGGACCAATGGCAGCTCACCTTCAACAACCTGAAACCCAACACTGAGTATTCTCTTCTCCTGTTGGCTGATGATGTTTCAAGAAACATCATCCCTGTGAGGACAGACTTTGATGAGATGCCAGCGGTGGCTACAGCgactcctctgctgctgctggctgtcaCTGTGCTCATCATCTCCATCCTGTCCAGGACTGTAAAACTGCAGTGATAAACCTCCTGGATATTGAGGACTTCCAGGTGACGGACGTACTCGGAGAGAAGAGTCTCATCACGGTCTGTCTGAACTCCCAGCCCTCCTCAGAAGAGGACCTACATGAAGACACCTCTCTGCTGTTGATCAGCCGCCTCATCATCAAACCGTCAGCCCTAGAACTGGACCCAGAGTATATTTCTGATGCTTCAGTGATCACAGAGCACCCACTGGTTTCTCTCCAGTCCTACCATGCTGACACAGTGAGCTGCCGACATCCTGACACAGTTTTCCCATCTGAGGAGAGCAGTGAGGCCGACGCTGCTATGCTGCATCAGACACGTGAAGCCAACAGCTGCTTTCCTCAGAAAGACGAAGAGAGTGACTTTTCTGAGAGGTACATCAGAAGGAGAAGGAAACTGCACTGAAATGTCATTTTCGTGAATTAATGCCAAACAGTCACTGTGCTTATCAGACAACCTTTGAAGCAGAGtatgtttcttcttttctggGTAAAACGGATGTGTAAACAGTGAGTGGACACTGGTCTTATCTGATCTGTGAGACTGATTATGGACAGCGTACTTCAGTGCAACATGCCAGGTTAAACACAGGTGGAAAAGTAAGAGTAAATGGTTACAGACATGCTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804040.1 True 2086 mRNA 0.51 12 35200417 35209715

Neighbor

gene id symbol gene type direction distance location
LOC120560891 LOC104934778,LOC100695474,LOC103374565,LOC101464334,LOC102198690 coding upstream 18421 35161583 ~ 35181996 (+)
slc2a8 slc2a8,slc2a6 coding upstream 39763 35145750 ~ 35160654 (+)
mymk tmem8c,LOC107720238 coding upstream 68670 35125559 ~ 35131747 (+)
LOC120561072 NA coding upstream 247940 34951502 ~ 34952477 (+)
LOC120561071 NA coding upstream 304788 34885538 ~ 34895629 (+)
LOC120560914 NA coding downstream 171010 35380725 ~ 35394499 (+)
znf608 znf608,LOC102795784 coding downstream 253576 35463291 ~ 35522112 (+)
LOC120560628 NA coding downstream 387091 35596806 ~ 35603337 (+)
LOC120560627 NA coding downstream 397753 35607468 ~ 35611982 (+)
LOC120560626 NA coding downstream 404135 35613850 ~ 35619866 (+)
G66907 NA non-coding upstream 198221 35000278 ~ 35002196 (+)
G66834 NA non-coding upstream 370763 34828892 ~ 34829654 (+)
G66830 NA non-coding upstream 384090 34815589 ~ 34816327 (+)
G66769 NA non-coding upstream 690804 34508142 ~ 34509613 (+)
G66695 NA non-coding upstream 713666 34486538 ~ 34486751 (+)
LOC120561203 NA non-coding downstream 45946 35255661 ~ 35258072 (+)
G66997 NA non-coding downstream 179061 35388776 ~ 35417807 (+)
LOC120560688 NA non-coding downstream 685436 35895151 ~ 35898183 (+)
G67202 NA non-coding downstream 845969 36055684 ~ 36059486 (+)
G67216 NA non-coding downstream 885100 36094815 ~ 36096123 (+)
LOC120561428 fam163b,LOC103374717,LOC102797860,LOC101061299,LOC102298266,LOC101485828,LOC104964271,LOC102215914 other upstream 140786 35046844 ~ 35059631 (+)
G66832 NA other upstream 335727 34861499 ~ 34864690 (+)
LOC120561070 NA other upstream 426611 34765930 ~ 34773806 (+)
cfap157 NA other upstream 673012 34514010 ~ 34527405 (+)
G66578 NA other upstream 1424019 33775925 ~ 33776398 (+)
LOC120560625 cep120 other downstream 312950 35522665 ~ 35549231 (+)
G67146 NA other downstream 631159 35840874 ~ 35852056 (+)
G67145 NA other downstream 631819 35841534 ~ 35854161 (+)
G67152 NA other downstream 661708 35871423 ~ 36023264 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other downstream 1031864 36241579 ~ 36492695 (+)

Expression


Co-expression Network