paip1 (paip1,LOC104941454)


Basic Information

Item Value
gene id paip1
gene name paip1,LOC104941454
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 26965484 ~ 26974939 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804102.1
ccaaaaaaaaaaagttgtgtatGATACTAGCCCATAGAGAAAAAAGACATCATGAAAGAGAGATAGGTTGTGCTTTGTTGTGGTTAAAACATAAGCAAGCAATTGCTGCTAcgcaaaacaaaaagcagtgaACAGCGTTTCTTCTTTTAATGCTGCTTTGAGAGTCAAGACAGCAGACATGAACGACAGTTTCGACCGAGCTCCCGGAGCAGGGAGAACCCGAAATCTACCCGCGGACCCCGGGCTTGCGGGAGCCGCCGCCGGGGATTGTGAAACCAAAACAACGCTTTTCAACCAAAGGGAACCATTGAGACAGCCGCGAACATCCCCGCCTTTTGCCGAGAACAACATTAGCACGGCCAACGTCGTGGGTGGTGGAGATTGTAAAAGACCGAGCAAACCccaacaaagtacaaatacaaacagcacgtctgcctccacAGGTTGTAATGAAGTGGATTCTTTGGTCAAGTCATCAAAGCTTTCAGCCAGTGCCCCAGAGTTTGTCCCCTCTGGAATCAACACGTATGAAGACCCCTCTTATTATGATGACGACGACAGTAGCTATTACGGTGAACCAACCTTGGCTGATACAGTCACAGACTTCCTGGCCCACCTGAGCTCCTCACCAGGATCCTTTGAGTCGGATGTTGAACAAATAACTGGCATGCTTAATTCCTGGGTTACTACTGAAGAGTTGTTGAAGGAGCTGGTGGAACTGATATACACACAGTCTACCGCCATTCCAAACTTCTCTTACACGGGTGCCAGGCTCTGTAACTACCTGTCCCATCACCTCATTGTCAGTCCACCAAGTGGCAACTATCGTCAGCTGCTCCTGCAAAGATGTCGAAAAGAGTATGAACAGAGGGATGTAGCGGTTCGAGGAGACCCGGAGACTCAGAAGAAATTCCACTCCTTTGTGCTCTTTCTTGGAGAGCTCTATCTTAACCTGGAGatAAAGAAAGCAAAAGGACCTCCAAATCGTGCAAATATCCTCCTCACTGCGCTGAAAGACCTGTTAATCAGTCTGTTCTCCAAGCCTGTGGATGCAAATCTCATCTGCGCTGTCAAACTGCTTAAGCTGACCGGCTCGGTCCTGGATGACACGTGGAAAGAGAGTGGAAAACCACACATGGAGGAATTGATCCAAAGAATAGAAACTATTCTACTGGATGCCACCTGCAGCAGGGATGTCAGACAGATGCTTCTTAAACTAGTGGAGTTGAGATCTAGTGATTGGGGCAGAGTCCGTGCTGCCGCAGCAGCCAGCAACGCCACGCCAGACAACGACCCTAACTACTTCATGaATGAACCTACATTCTACACAGAAGATGGTACTCCTTTTACAGCAGCAGACCCAGAATATGCTGAGAAATACCAAGAGATCCTGGACAGGCAGGACTATTTCCATGATCTTGATGGAGaaaatggaaatgaaatATACGACTCTGAAGATGAGATGGAGCCTGAGATAGAAGAAGCTTTTGAGAATTTTTGTTTAGAAGCAGAGAGGAAACGACAACAATGACGCAAGAGTGAGAATCTGTAAGACTCAACGGGCACATATTGTACTTTTCCCACTGGAATGTTgaaaagcaaaggaaactagaaTCAGATAGGTTCAAACTTTCATTTTACTGCAAACAAGCATTTTAAAATAAGAGCTGTTCATAGTTGCACTTCTGACACTTTTTTTCCGTCAGTGTTGATTAGGAAATGGGGACAATCAACAGGGTTAATTGTTCGAAATATTGAGGTATTAAGTTTTTTTTGGACATGAAAGttctttgtttgttgtttttaataatttcaTGAACGTATTTCCTAAACGCCTAAACTAAAATGCCAAGAGGGAAATAGTTTGCTGTGGATTTTTTTGGAGTTCTTTTCTGAAAGGCAGATACGTTTCATCAGAGGTGTGCATACTTTGTTAAATACTAATTAATGACCCATGCATTACGTATAGGCCAAAAAGTTGTGCACTTTGGAAAATGCATTATAGCGCTAAAAGAAATTATAATTGACAAACTGGAAAGTGAGTATAGATAAAACTTTTTTATATATCTCTCTGGGGCTAAAGACAGCATTTTAAAAAATACTAAGtaaaatattaaacattatGAGAATCAGCGGTCAGTGTGACATAAAAAGGAAGAATTGTTATCCCAAGACTGAAAGACTGTTTACCAGCCATCCATGCAGCCCCCAAGGAATGTTGTTCTGTAGTTTGTAAATATTATTTATGGTATTGTTTGCCTGCAATAAACTCTTTATAATGTGAGATttta

Function

symbol description
paip1 Predicted to enable translation activator activity. Predicted to be involved in regulation of translational initiation. Orthologous to human PAIP1 (poly(A) binding protein interacting protein 1).

NR:

description
PREDICTED: polyadenylate-binding protein-interacting protein 1

GO:

id name namespace
GO:0003723 RNA binding molecular_function

KEGG:

id description
K14322 PAIP1; polyadenylate-binding protein-interacting protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804102.1 True 2291 mRNA 0.43 11 26965484 26974939

Neighbor

gene id symbol gene type direction distance location
fgf10b fgf10,LOC104956796 coding upstream 3492 26952220 ~ 26961992 (+)
adamts12 adamts12 coding upstream 20017 26924528 ~ 26945467 (+)
myl7 myl7,LOC101480470 coding upstream 55056 26908203 ~ 26910428 (+)
gck gck coding upstream 57965 26901799 ~ 26907519 (+)
osmr NA coding upstream 77658 26877033 ~ 26887826 (+)
itga2.2 itga2 coding downstream 6406 26981345 ~ 27002644 (+)
fsta fst coding downstream 30200 27005139 ~ 27011321 (+)
snx18a snx18 coding downstream 204421 27179360 ~ 27193519 (+)
LOC120560992 LOC106926053,LOC103469987,LOC103145901,LOC108233650,LOC105928392,LOC106519893 coding downstream 334261 27309200 ~ 27324830 (+)
mthfd2l mthfd2l,LOC102288655,LOC100709995 coding downstream 419478 27394417 ~ 27417204 (+)
LOC120560738 NA non-coding upstream 65926 26897902 ~ 26899558 (+)
G64967 ykt6 non-coding upstream 69341 26893701 ~ 26896143 (+)
G64949 btf3,LOC103470010,LOC107089645,LOC106958054,LOC106926613 non-coding upstream 136299 26761391 ~ 26829185 (+)
G64944 NA non-coding upstream 281229 26682518 ~ 26684255 (+)
G64930 NA non-coding upstream 301958 26662767 ~ 26663526 (+)
G65083 NA non-coding downstream 225010 27199949 ~ 27200190 (+)
G65106 NA non-coding downstream 404059 27378998 ~ 27379215 (+)
G65108 NA non-coding downstream 414518 27389457 ~ 27389862 (+)
G65171 NA non-coding downstream 501809 27476748 ~ 27476966 (+)
G65272 NA non-coding downstream 928136 27903075 ~ 27904933 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other upstream 303589 26644661 ~ 26661895 (+)
cltcl1 LOC100691387,LOC103359525 other upstream 321317 26614237 ~ 26644167 (+)
c6h22orf39 clg12h22orf39 other upstream 468497 26494284 ~ 26496987 (+)
G64814 cldn5,LOC103357131 other upstream 550887 26412869 ~ 26414597 (+)
nsd3 whsc1l1 other upstream 581641 26359120 ~ 26383843 (+)
ndufs4 ndufs4 other downstream 37271 27012210 ~ 27039599 (+)
G65084 lipg other downstream 230295 27205234 ~ 27370959 (+)
mboat4 NA other downstream 1870687 28845626 ~ 28849471 (+)
ubac1 ubac1 other downstream 2369641 29344580 ~ 29351756 (+)
fbxo21 fbxo21 other downstream 3211909 30186848 ~ 30212108 (+)

Expression


Co-expression Network