atad1a (atad1,LOC101479261,LOC100705680,LOC104934768,LOC102292399,LOC106527948)


Basic Information

Item Value
gene id atad1a
gene name atad1,LOC101479261,LOC100705680,LOC104934768,LOC102292399,LOC106527948
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 13986231 ~ 14000271 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804110.1
CCCGGAACTGAAGTGTTTGTTCCTACCCGAGTTACAAAACGTAATGCACCTTAAATGCTGccagtgttttcagtgttattCAGTAGTATTTCGCTGTTCTTTACTAATGGACTGACATCAGCTAGCAGAGATGCTGCTTAAGGATCTTCCCAAAGAGGCCCTGTTGCGGCCGTTGTCCAGGAAGGAAGTGGTGGGCATGTTGTTGAGGTTGACCATCTTTGGCGCAGCAACCTACTACAGCATCAAATGGGTTGTAGACGCTATGGACCCTACCTCCAAACAGAAAAACCAAGCCAAGAAAAGGGCAGAACAACTGATGAAGAGGATTGGCATTGAGGGCGTCAAACTAACAGAGTATGAGATGAACATTGCAGTTCATCTAGTTGATCCTCAAACTATGAAAGTGTCCTGGAGAGATATAGCAGGTCTGGATGAGATTATCAATGAGCTGCAAGACACAGTCATCCTGCCCTTTCAGAAAAGACACCTTTTGGCTGGATCCAAACTCTTTCAGCCTCCTAAAGGTGTTTTATTGTTTGGTCCTCCGGGATGTGGGAAGACCATGATCGCCAAGGCAACAGCCAAAGCCTCGGGCTGCAAGTTTATCAACCTTCAGGCGTCCACGCTGACCGACATGTGGTACGGCGAATCACAGAAGTTGACTGCTGCGGTCTTCTCATTGGCTGTCAAAATCCAGCCCTGCATCATCTTCATTGATGAGATGGAGTCATTCCTGAGGAACCGTTCCAGCCTGGACCATGAGGCCACAGCCATGATGAAGGCCCAGTTCATGAGCCTGTGGGATGGCCTGGATACTTCCTCAACCACCCAGGTGATGGTGATGGGAGCCACAAACAGGCCACAGGACGTGGATCCAGCCATTCTGCGCAGGATGCCTACCACTTTTCATGTTGGCCTGCCAaacacaagacaaagacaGGACATCCTGAGGCTGATCTTAGCAGGAGAAAATCTGAGCAATGCCATTAATCTAAAGGAGATTGCTGAGAAGACAGAGGGTTACTCTGGCAGTGACCTCCGGGAGCTTTGCCGCGATGCTGCCATGTACAGAGTCCGGGACTACGTCCGCAAGGAGCAGATGAGGCAGATCGCTCAGCAGCTACAGGACTGCGAGGAGGAGGAAACACCTATGGATGAGGACCGGTTGCGGCCAGTCACCCAGCTGGACCTCCTTTTCGGCCTGGACAAGATGAAGGAATCTAAGCGGGCCACCGTCTCCATGTTGCCCATTGTGTCAGAGGTACCCCTGGACTAAACATCAACACTGCACCACGGCGAGAAACGTTTTCTTCTGGCTTTTCTCCGCAGTGCGTTCCAACTCCCCAACAGAGGCTCCTCCGACACGTCAGAGGTGTAGTTGAAAAAGCCAGAGAGCAGCCACACCTTTCTTAACGTTTATTTATCCAGGCAGAGTTTGTTCTGAGCACGCTCCCTTTCAGCACAACTCTGTCACATGTGTACAGTTAcaatacattcagaaaatctaATGTCTTACTGGCCACTGTCAATCCGCCTCGTGCATGAAATGTGCGTACACGTTTGCGTACAATTTAATAACTTTTGTGGCATTCATCAATACTAGTTTTTAGGTAAGATCAAAAtgtaaaggtgcaatatgtaatgctgacagctagtgtttaaaatagttactgcagtaaaaaattcaaaatgctggagagagtcgtcgcccccgccccctcctccccagactcgaagttcacggaggttgccaggctgagaccgcagcatccgcaacaatgttgctagacgcttgtctcacatagccagacattacttcacagtacagcggagtagctaacgctAGATGATGGCTATATTGAcggtcataaaagcccgtgctcacgcggagctctgcacccaactgacagactttttcggcttagaattacggtaggaaccgctaaaaacccAACAACCTCGCCatcctctccacctgactgacGGACACACTTCctaggcttagaattacggtggGAACTGCTAATAACACATGCTAATGCTTACTCGGCGttcttttgggctctaagctgactccatctttcaaatacatctccagtATTTACCCAGGGTTTGTTacatctctggtcacgcaacatGTCGTCTTTTTTGTTTCGgttgggtagaatctatctccgttgatcctgtttatttgttaagtttttacaggtatatctggcaacccagcctggctgtcaaactgggcagttgataccaacacataggccaaaac

Function

symbol description
atad1 Predicted to enable ATP binding activity and transmembrane protein dislocase activity. Involved in extraction of mislocalized protein from mitochondrial outer membrane. Located in mitochondrial outer membrane and peroxisomal membrane. Implicated in hyperekplexia 4.

NR:

description
ATPase family AAA domain-containing protein 1-A

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0005524 ATP binding molecular_function
GO:0017111 nucleoside-triphosphatase activity molecular_function

KEGG:

id description
K22530 ATAD1; ATPase family AAA domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804110.1 True 2272 mRNA 0.49 10 13986231 14000271

Neighbor

gene id symbol gene type direction distance location
LOC120559997 NA coding upstream 25074 13945038 ~ 13961157 (+)
LOC120561313 olfml2a coding upstream 83582 13869682 ~ 13902649 (+)
adgrd2 NA coding upstream 339881 13567559 ~ 13646350 (+)
lhx2b lhx2 coding upstream 620021 13349141 ~ 13366210 (+)
bcl2l16 LOC103353844,LOC104923787,LOC108246437,LOC104963815 coding upstream 1053232 12909814 ~ 12932999 (+)
piwil2 piwil2 coding downstream 147299 14147570 ~ 14188917 (+)
LOC120560074 NA coding downstream 198484 14198755 ~ 14211704 (+)
LOC120560659 LOC103369208,LOC102291259,LOC102215744,LOC101478239 coding downstream 211968 14212239 ~ 14233388 (+)
idua idua coding downstream 234007 14234278 ~ 14246305 (+)
unc119.1 unc119b coding downstream 376983 14377254 ~ 14383227 (+)
LOC120561318 NA non-coding upstream 80891 13904693 ~ 13905340 (+)
LOC120561317 NA non-coding upstream 81573 13903363 ~ 13904658 (+)
LOC120561319 NA non-coding upstream 160997 13812112 ~ 13825234 (+)
G61259 NA non-coding upstream 299319 13686631 ~ 13686912 (+)
G61258 NA non-coding upstream 302025 13683996 ~ 13684206 (+)
G61332 NA non-coding downstream 60651 14060922 ~ 14061171 (+)
G61376 NA non-coding downstream 261884 14262155 ~ 14262869 (+)
G61389 crybb3,LOC103469711 non-coding downstream 325119 14325390 ~ 14327533 (+)
G61391 NA non-coding downstream 327909 14328180 ~ 14329747 (+)
G61431 rnf10,LOC102784202 non-coding downstream 364961 14365232 ~ 14368488 (+)
LOC120560904 crb2,LOC103353841,LOC106959700,LOC106929552 other upstream 805740 13132098 ~ 13180491 (+)
G61139 tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 other upstream 1062395 12921147 ~ 12923836 (+)
G60897 NA other upstream 2059630 11926183 ~ 11926601 (+)
LOC120561144 NA other upstream 3233791 10748116 ~ 10752440 (+)
LOC120561142 NA other upstream 3239278 10726438 ~ 10746953 (+)
G61337 LOC100705941,LOC102292089,LOC108234925,LOC106529513,LOC104934772,LOC103365846 other downstream 107212 14107483 ~ 14109546 (+)
G61338 htr7,LOC104934772,LOC101065316 other downstream 141171 14141442 ~ 14142050 (+)
LOC120560400 tmem150a,LOC106585116 other downstream 251985 14252256 ~ 14281771 (+)
G61383 NA other downstream 283146 14283417 ~ 14283871 (+)
G61390 crybb2,LOC108234953,LOC100703162 other downstream 317268 14317539 ~ 14319506 (+)

Expression


Co-expression Network