LOC120561147 (rassf2)


Basic Information

Item Value
gene id LOC120561147
gene name rassf2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 26295751 ~ 26307628 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804116.1
TTAACCGGACTGATGGTGTGCGCGTGCTCGGCTCCCATTGTTTTCGTGTTTTCATTCATCTCCGCACGCAGCGTGAACAAAGGGGCGTCAGGGTCGCGCTCTGATTGGCTCCCGGCCACCCGACGCTACCGCGAGCTCCGCCACAGCAGATGGACCTCTCgtgctctcctcctccttgaTGCACGCGCCCCAGTGATTGTTTCCAACGGCAGGAGAGCTAGCGAGTTGAACAAGGAGTTTAACGTTAACGGACATTTCACCTTTTACggtgaagaagaggaaaaacgggaggaggaggtggaaaaGGAGAACCGGAGAGCCTTCGTCCACCGGGTTTGCTCCCTCTTTCTGGTGATTCAACAAGACCACACAGTCTTCACTACGCTCCTCTCATGCTTACTGAGAATGGATGATACAGAGTACGGGGTTCAGATTGGAGAGAACAAGTTCATCAGGAAGGCAACCGTCCTCTCACATCTGAAGACGTACAACCTCTACTATGAAGGACAGAATCTGCAGCTCAGACACAGAGAGGAAGAGGGGGAGCTGATTGTCGAGGGTTTGCTGAATATCTTCTGGGGTCTGCGGCGACCAATCAGGCTTCAGATGCAGGATGACCACGAGCGCATCCGACCGCCCCCCTCCTCTACGTCCTGGCACTCGGGTTGCAATCTGGACAGTCAAGGTTCCCCCAACAGCACAGATGGTCAACAAACGACACAGCAGAGCCCGCCCACAGTAGAAGTGACAGAACCTGACAGCCAACCAGAGGACGACGGTGTGATGGAAGAGCAGGCAGAAGAAGACAGTGAGAGCTCTGCTCAGCTGCTCAGAACTAAGAGCGATGCGGGCGTCTTGAGACGGGGCCAGCGACGGTCACCGAGCGACCAGAGGAAAATTCGACGCCATCGCTTCTCTATCAATGGACACTTCTACAACCATAAGacatCAGTGTTTACTCCTTCTTTCGGCTCGATGACTAATGTTCGGATCAACAGCTGCATGAGGACACCTCAGGTGCTTCGAGTTCTCCTCAACAAGTTTAAAATTGAAAACAGCCCAGATGATTTTGCCCTCTACCTCGTCCATGCAAGTGGAGAGCGTGTGAAACTGAAGCGAAATGACTATCCTCTGGTGCTGAGAGTGATTCAGGGTCCATGTGAGCAGGTCTGCAAGGTTTTCCTCATGGAGGAAGACCTCGGAGAAGAAGTCACGTATGATGTGGCACAGTATATCAAGTTTGAAATGCCAGTCCTGCAGAGTTTCATCACCAaactgaaggaggaggaggacagagaggtgCAGAAACTCAGAAGAAGGTATACGTACCTGCGGTGTATAATTGAAAAGCAGC

Function

symbol description
rassf2 Enables protein kinase activity. Involved in protein stabilization. Acts upstream of or within positive regulation of JNK cascade; positive regulation of apoptotic process; and regulation of protein phosphorylation. Located in several cellular components, including Golgi apparatus; kinetochore; and nucleoplasm. Part of protein-containing complex.

NR:

description
PREDICTED: ras association domain-containing protein 2

GO: NA

KEGG:

id description
K09851 RASSF2_4; Ras association domain-containing protein 2/4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804116.1 True 1354 mRNA 0.52 11 26295751 26307628

Neighbor

gene id symbol gene type direction distance location
slc23a2 slc23a2,LOC107394182 coding upstream 4285 26249127 ~ 26291466 (+)
kcnip3b kcnip3,LOC102307840,LOC102210345,LOC104951840,LOC103397788,LOC101482209 coding upstream 50275 26197240 ~ 26245476 (+)
pcna pcna coding upstream 111391 26181011 ~ 26184360 (+)
zgc:152830 LOC103357146 coding upstream 115635 26174224 ~ 26180116 (+)
gpat2 LOC101483931,LOC102796756,LOC102305881,LOC102195621 coding upstream 134143 25980908 ~ 26161608 (+)
sprn2 NA coding downstream 17121 26324749 ~ 26328928 (+)
plpp5 plpp5,LOC102777825 coding downstream 76781 26384409 ~ 26394401 (+)
cdc45 cdc45 coding downstream 88170 26395798 ~ 26402661 (+)
zgc:63587 LOC101064433 coding downstream 108262 26415890 ~ 26447513 (+)
sept5a sept5,LOC102226618 coding downstream 151998 26459626 ~ 26470702 (+)
G64677 NA non-coding upstream 366593 25928924 ~ 25929158 (+)
G64663 NA non-coding upstream 373363 25922163 ~ 25922388 (+)
G64658 NA non-coding upstream 377658 25917765 ~ 25918093 (+)
G64657 NA non-coding upstream 378275 25917187 ~ 25917476 (+)
G64643 NA non-coding upstream 378859 25915944 ~ 25916892 (+)
G64834 NA non-coding downstream 204837 26512465 ~ 26514759 (+)
G64836 polb non-coding downstream 224124 26531752 ~ 26533420 (+)
G64838 polb non-coding downstream 227384 26535012 ~ 26537695 (+)
G64839 NA non-coding downstream 230640 26538268 ~ 26538541 (+)
G64840 NA non-coding downstream 231030 26538658 ~ 26540223 (+)
LOC120560359 NA other upstream 367155 25926087 ~ 25928596 (+)
LOC120560031 LOC104941040,LOC103357154,LOC102795853 other upstream 380174 25914279 ~ 25915577 (+)
LOC120561182 LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747 other upstream 599175 25684964 ~ 25696576 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other upstream 1458303 24823718 ~ 24837448 (+)
prxl2c aaed1 other upstream 1472685 24821314 ~ 24823066 (+)
nsd3 whsc1l1 other downstream 51492 26359120 ~ 26383843 (+)
G64814 cldn5,LOC103357131 other downstream 105241 26412869 ~ 26414597 (+)
c6h22orf39 clg12h22orf39 other downstream 186656 26494284 ~ 26496987 (+)
cltcl1 LOC100691387,LOC103359525 other downstream 306609 26614237 ~ 26644167 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other downstream 337033 26644661 ~ 26661895 (+)

Expression


Co-expression Network