LOC120561163 (lmbrd2)


Basic Information

Item Value
gene id LOC120561163
gene name lmbrd2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 21393773 ~ 21403390 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804144.1
TGTTACGTAATGTAGTTTCAAAGGTTGTGTACATTTTTCGGACTACACGCCTGAGGAACATAATGTGACAGTAAATTCAGACAGTTAACCGCTTTACAAGCTTCAGCCTGAGAGAAGAAACTCAAAAGTGTATTATTATGAGTTCCTGATGTCTGTCTGTTGACTCATCACTATGAGTGGTGCTGCGCTGGCTGTTGTGGTTGTAGTTGTTTTCCTCTTGGCCCTCTACCTCCTCCAGCGCTATGGAGACTTGCGGAGGCAGCAGCGGATGGTCCTGTTGGGAACGCTGCTGTCCTGGTACCTCTGCTTCCTCATCGTCTTCATCCTGCCACTCGACGTCAGCACGACCATCTACAAGCAGTGTATTCTTGACAATGCAAACCACCCTGCTCCTGTAACTCAAGCAAGACACACTAATCAGACAGAGAGCAGATCCTCTGTTTATCCAACTGTCAGTCTACCAAAGGTTTGTGAGGAACCATGGAGTTATATCCCAGATGGCATCCTACCAGTGTTGTGGAGAGTTGTATACTGGACATCCCAGTTTCTTACCTGGCTGTTGTTGCCCTTCATGCAGTCTTACGCACGATCAGGATCTTTCTCCAGAGTTGGAAAGATTAAGACAGCTCTCATTGAAAATGCTATCTATTATGGCACCTACCTCCTTATCTTCATCTCTCTGCTCGTGTATGTGGCTGCTCACCCACAGTGGCAACTCACATGGAGAGAGCTCCAGACCATCGGCATTACAGCCGCCAACACTTGGGGCCTCTTCCTTCTGGTGCTGTTGCTAGGCTATGGCCTGGTGGAGATCCCGCGTTCTTATTGGCTCTCATCTTCCCACGGTTACCTGCTGGCCAAGACCTACTTCAAGGCAGCAAAAATGGCTACTGAGAAGGCATCGGCTGAAGAGAACCTAGCAGATGTTATGGAGGAGGTGGCAGGCATCCATGGATCTGTTAGGTACAACCACTGTCTCAGGAAGTGTGTGGACACTATTATTGCAAAGTGTCCCACTGAGTACCAAGAGGAGATGGGAAGAAATGTGGAAAGCTCTTGTGGTGAACAGAATGCCCTTCCCACCAAAAGAAGCCTGAATAAGcttcataaaaaagTAATCTCTGCAGTGCAGAGGCACAGTCAGACTCAGGTACAGTGGTCCATCTTGTTAGACCAGGCCTTTCATCTAGAAGATGTAGCTGAAAGCCAGAGCAGCCCGGTCCGACACTTCAACCACAGCTTCCCCTCAGTACGCCACCACAGCTGGATCTATCGCTTCATCTACACTCCTACTGTGGagtgGTACTGGGAGTGTGTGTTAAGGCAGGGTTTCTACAGGCTGCTGGCAGTTCTCCTGTGTCTACTCTCAGCAACAGTTGTTTGGTCCGAGTGCACCTTCTTCAGCACACACCCTGTCCTCTCCCTCTTCGCTGTCTTTGTTCAGATggcggaaaaacaacacaactacATTTGTATCGAGATGGCGTGCTTTGTCAGTATActcttcctgtgtgtctgtgtctactCCACAGTATTCAGGATACGAGTTTTCAACTACTATTACCTAGTGCCCCATCACCAGACTGATGCTTACAGCCTGCAGTTCAGCGGCATGTTGTTTTGTCGTCTGACCCCTCCTTTATGCCTCAACTTTCTGGGCCTGATTCACATGGACTCTGCCATCTCACACCAGGACCGAATACAGACATCCTACACCTCTATCATGGGTTCTATGCGTGTGCTATATTTCATATCTGATGGGTTCTACATCTACTATCCCATGCTGGTATTGCTACTTTGCTTAGCCACTTTTTACAGTCTGGGCTCTCGCTGTTTGAACCTCCTCGGCTTTCATCAGTACATCACTGACGATCACTTGACTTCTGACCTGGTGGATGAAGGCAGGGAACTCATCAGAAGAGAAAGAAGAATAAAACAGAAGGCTGAGGATGGAGAAAATCGAAGATGGgCCTGGAGGGAGCGGTATGGAGTCCAGGAGGCAACTGGGCGGACCAGAGGTGGTTACACTCAGCTGAAGGATAACCAGAGCAGCCCTGTCACAGAGATCAACAATAGTGTTACCCCATTCACCagaagagatgaggaggaggaggagcagagatGCTTACTGCAAGATAATTCCAGTTATGAAGGTTCACCAAACAGAAGATCCACAGGAGGACGTTACCTGTCTCTGTCACCTTCTCGGACAGGCATCTTTGACAATGTTTGATAGACAAAAGACATGGAGggagaacaaaaaaaagctaGTACATGCTGGAATTGGAAAAAAAGGACTAAAGACTTCTTGAGTGAAGTCTTAATGCAAAGAATTATACAGTATCTCAGGAAGTAAAGAGGAAGATCATGTATCTGAGACATGGACATACAATCACTAACAATCATTATTAACTGAAAGAGAATACTGTGATTAACCTGTTTGTGCACAGCCAAACCCTTTTTGATGTATTTTTGATATTGCCTTTCAaacaatattgatttatttaagtgTAGATTGATGGATGAAAGACATGAATGGCACAGTTATGCACTTGCAGTCATTTAGGATAACCGCATATGATACACAAGGAAATGTATTGCTGTCTGAATATTTCACCATAAGAGTTgacatattttatgttttaattaaacatctgtgaaaacactgaaacaaaaacaagtcaAAGATATCAACAGTGTAATGTATTTCTTGTTGGATATTTTGTGCTCCGAAAGAAATGACTTGTTTGTATGTAATGTAGTCTACAAATACCTATTATTTTCTGTATGTATATTTTGTctttatgttttgtattgtgtgtctaCCATGATAATGCAATTAAACATAAGTTAACCCATTTA

Function

symbol description
lmbrd2 Involved in adrenergic receptor signaling pathway. Located in membrane.

NR:

description
PREDICTED: LMBR1 domain-containing protein 2

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804144.1 True 2862 mRNA 0.45 18 21393773 21403390

Neighbor

gene id symbol gene type direction distance location
LOC120560913 gdnf,LOC103362940,LOC102209597,LOC101471543,LOC102304722,LOC106526208 coding upstream 111265 21278402 ~ 21282508 (+)
si:ch73-72b7.1 unc5c,LOC102797243,LOC102309063,LOC102212007 coding upstream 343924 20849986 ~ 21049849 (+)
stpg2 NA coding upstream 841954 20499130 ~ 20551819 (+)
LOC120560324 NA coding upstream 992781 20397583 ~ 20400992 (+)
LOC120560540 NA coding upstream 997656 20394843 ~ 20396117 (+)
golm1 golm1 coding downstream 573 21403963 ~ 21410730 (+)
agtpbp1 agtpbp1 coding downstream 24953 21428343 ~ 21458347 (+)
hnrnpk hnrnpk coding downstream 223622 21627012 ~ 21641536 (+)
c6h9orf64 LOC103366756,LOC102204152,LOC102298164 coding downstream 239507 21642897 ~ 21649576 (+)
LOC120561417 kif27 coding downstream 247067 21650457 ~ 21660743 (+)
G63576 NA non-coding upstream 46256 21346367 ~ 21347517 (+)
G63545 nipbl,LOC104950412 non-coding upstream 79682 21312753 ~ 21314091 (+)
G63511 NA non-coding upstream 171122 21164816 ~ 21222651 (+)
G63471 NA non-coding upstream 732616 20660840 ~ 20661157 (+)
G63468 NA non-coding upstream 746276 20646192 ~ 20647497 (+)
G63627 NA non-coding downstream 76390 21479780 ~ 21484666 (+)
G63628 NA non-coding downstream 83379 21486769 ~ 21487038 (+)
LOC120560273 NA non-coding downstream 205433 21608823 ~ 21620711 (+)
G63641 rmi1,LOC102777824,LOC104967280 non-coding downstream 212833 21616223 ~ 21618602 (+)
G63714 NA non-coding downstream 441442 21844832 ~ 21845138 (+)
G63480 rbm19 other upstream 715857 20676417 ~ 20677916 (+)
wdr31 wdr31,LOC102796061 other upstream 903187 20473651 ~ 20490586 (+)
vps13a vps13a other upstream 951680 20400947 ~ 20442093 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other upstream 1630249 19759596 ~ 19763524 (+)
rasl10a rasl10a other upstream 1944823 19430401 ~ 19448950 (+)
LOC120560787 NA other downstream 185486 21588876 ~ 21599289 (+)
G63905 NA other downstream 1526509 22929899 ~ 22930205 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other downstream 2084577 23487967 ~ 23562285 (+)
G64108 NA other downstream 2289272 23692662 ~ 23693291 (+)
prxl2c aaed1 other downstream 3417924 24821314 ~ 24823066 (+)

Expression


Co-expression Network