XLOC_005156


Basic Information

Item Value
gene id XLOC_005156
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 7070639 ~ 7083373 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011093
TTTTGAAAATCTGCCAAAGTGACTTGAGTGAAGAATAAAGTGACAGGAACACACAGGTCTTGAAGCGGGGTGTCAGCCTCCTGGAACAGTTTTTCACAGCTCAGCTAAGACCTCTTCATCTGGACAGGCTGCTGGAGTCTGCAGACATCAGGACTTCCCTTTGGTCTCATGGAGCGCTGCCATACATTTGGCAATGCAAAGTTAATTCGAGAGCTTTGAAAGATTTTTACATCCAGGCCAGAGCTCGAGCCCTGCAAAAACATTAGCTGTGGGCCAAAGTGTTGCCCAGGATGTGATTAAGAAATAACAAgttaatgaaaaaatgaaatgaGTACAAGCATTTGCCTGGATGGAAGACTTAAAGGCATGGCAGCAAAATTCAATGGGTCCCAGAACTAAATTATGGCTGTTTTGTTGGcccaaaatagtaataatatgaGTCATATGTGGACCGTGATTTGTTTCTTATTGGTATGTCTATGGAAAAAAATTCATACCGTGGAGTAATGGCATTCTGATAGTGATTATTTTGTGGTGAAGGAACAAgcactgtaaaaagaaaatgggctccacacaattccttcgaGTTGTgccaaacacaaatcgattaattcatctttgtcatttttacaaattgaagtggattgaacataaaacaattaagttgtcccctcaaaaaaaaacaaacatgagaattgtgttgtttcaactcattttacataagtttgaacaagcagcaaaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011093 True 742 lncRNA 0.39 2 7070639 7083373

Neighbor

gene id symbol gene type direction distance location
XLOC_005155 NA coding downstream 25945 7017519 ~ 7044694 (-)
XLOC_005154 pcdh15b coding downstream 165264 6566233 ~ 6905375 (-)
XLOC_005153 si:ch211-253p2.2 coding downstream 518958 6542789 ~ 6551681 (-)
XLOC_005151 NA coding downstream 577547 6306823 ~ 6493092 (-)
XLOC_005152 NA coding downstream 707059 6348703 ~ 6363580 (-)
XLOC_005157 NA coding upstream 59094 7142467 ~ 7142830 (-)
XLOC_005158 si:dkey-187i8.2 coding upstream 66075 7149448 ~ 7157527 (-)
XLOC_005159 ipmkb coding upstream 110406 7193779 ~ 7235103 (-)
XLOC_005160 ube2d1b coding upstream 154293 7237666 ~ 7253270 (-)
XLOC_005161 zgc:171971 coding upstream 185019 7268392 ~ 7280551 (-)
XLOC_005148 NA non-coding downstream 914680 6151831 ~ 6155959 (-)
XLOC_005147 NA non-coding downstream 920953 6142282 ~ 6149686 (-)
XLOC_005162 NA non-coding upstream 220192 7303565 ~ 7322951 (-)
XLOC_005163 NA non-coding upstream 322715 7406088 ~ 7441307 (-)
XLOC_005164 FP102277.1 non-coding upstream 419589 7502962 ~ 7503098 (-)
XLOC_005170 NA non-coding upstream 920136 8003509 ~ 8073263 (-)

Expression


Co-expression Network