LOC120561189 (LOC102300215,LOC108165969)


Basic Information

Item Value
gene id LOC120561189
gene name LOC102300215,LOC108165969
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14646727 ~ 14666265 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804189.1
ATGACACACTCAACGTTTCTCTGCATCACACTAgtaccacagagagagagagaagagaggaggtgaACCatagaaggaggagaggagagggggaagCTCTCCATGAGACGAGCGAGTAAAccaagagaaagggagagaaaactAAAGGAGGAGATAGGAGAAGATAAAGGAGAAGCTCACGAAAAGGAGAGCAATGAAAAGAGTCAGAAACAACGCagaggaaaaagaaaggagGTGAAGAGGACCGAAGCCAAAGCAAgtagaggggaggaggaggaagaggaggaggaggaggagggaaagaagaagaggagtaaagaagaagaaagtggaCAAGAAGAATAACAGTAGGAGGTGAGAAGAGAGAGACTTTAAGCAGAAGAGGAAGCAGAAAGTCAGAGAGGAGGGTGAGGGGAGGAAGTGAAGAGGCAGGacaagggagggaaggaggagatACCGGAGGAGGAATAGGAGGACAAGAAGAGGAGCAGCAGTGTCAGCATGGAGGGGGACATCAGGAAACAGGGGATGCTCTACCTGCAGCAGCAGAGGTTTGGAAAGaAATGGAAGCGTGTGTGGTGCGTCCTGTTCAGAGACAGTTCCTGTTCGATTTCCAGACTGGAGTTCTTTGAATGTAAAGATGGAGGAAGTGCAGAGAAGAGCGACAAAAATCTTCGCAAACATCAGGAGCACAAGAAGgtgatCCGTCTGGCGGACTGTATACGTGTGTCGGAAGTGGACATGGACGGATGTCCTAGAGACACGGGACCCTTCCTGATCGAGACCACCGAGAAGATCTACGTGTTCGCTGCGGACCGACTACAGCTGGACGACTGGACACACAAACTGTGTGAGATCGCCTTCCCTACTAATTGGACAGAACACGGAGTGAAGAGAGGAAGCCTGCAGAGAGGAAACAGAGTGGACGAAGATGAAGGAATGGAGGACAACTCGCTGTACAGCGGCAGAGAAACAGtgcGTGATTTCAGAGTGTGTGTTCGAAGGACAGAGGCGGCTGATCGCTGCAGACTGAAAGGAGACGGATTCCTGCGAGCAGATGGTGACGCTCTTCACCTGCTGGATAAGGCTGGAGACATTGTTTACACCTGGCCATACAGATACCTTCGCCGCTTCGGACGAGACAagTCCACCTTCTCCTTCGAGGCTGGCCGGAGGTGCGACTCCGGTGAGGGCAGTTTTGAGTTCGACACCAAACAGGGGAACATCCTGTTTCAGGCCGTGGAAACTGCTATAAACCTTCAGCGGATCTCCTGCCCCCAGAGGCAGACCTCTGGGGGAGGCCGGGTGAGTCCAGAGACCTCTCAGGACGGGAACCTGCCCCCTCCGCCCCTCAACCCACCCCTGGCCCAGTGCAGGATGGCACCGCTGCCTCAGCTCCGCGGCCATATCCCACAACCCCCTGCTGCTCAGGCTGATGACGGCGTGTACAGCATGGTGACTGAAACTCCGAATCTTCTTATGATTCTTCAAAAAGATAAAGAGAGCTCCACTTCTTCACAACTGCAACACCGCCCCCAGCTGTCTCGTCTAGAGCCTCCAGTTGACAAAACGCTGACTGGTGTTAAGAGTTTGACTCTGGACACTCGCGGCATCCCTGTCCCTCGTAAGAACCAGGTCAAGATGATCTCCAGCTGCCCTCTGCCTCACGCCGGCCCCGAGCCCGGCCCCAACCTGGCCCAGGGCCCCGGCTCCACCCACAACCCCAGTCCTCGCCTCAGCCCCAAAACGAGCTCCATCCCCAACCTAGACGAGACGTACTCCCAGATCAACCTGCCGACCGCCGCAGAGCGAGGCGCCAAGAGGGAGAAGAGAGGCGGCAGTGTGGCTCCCTCCTGCACCCCCCCCGCCATCCGCAATGAGCCGGACTACTCCCTCCCCTTCGACACCATCGCCATGAACGTCATGTCAGATATCCTGAACTCCCATCAGGCTCCAAGAGCTGAGTCTGGCGCAGACCCGCTCTACGACAGCATCGACGAGATGAAGATCAGAAACATCTTCCTAAGCGCCACCCCTGCTGCCGGCGAGCTGCAGTACAGGAAGGTGGAACACATCTACGACGAGCCCGAAGGCTGCGCCGCCGTCCCTACGCAGAAACCTCCCAGCTCCGTGTACGACGACCCCGAAGAAATGAGAGGAGATGCCTGGAGGATTATGGGTATACCTGCTGACCCTAAAGGTCACGAGTACCCGTACAACGCCCGGGTGGACGACTACGCTGTGCCCAAACGAGCCCAGAGGGTGCTTCCTGTTAAACAAAgcacagagaaagaagaagaagaagacgaagacgaagaagaagaagaagaagaagaagaagaagaagaagaagaagacgggGAGGAGGAgccacaggaggaggaggaggacgaacGGAGCAAGGAGCAGCAGGATTCACCGTACAAAAACATCATGGTGAAGATGGCGTAGAAGAGACAGGAAGCAGCTGTGAGCATTAACATGATTCAGATATAAATATTTAGGTTTATTATTTAATCCAGCTGGCAGACTGAGCCGATCACTGAGACTCTGGTTTTTAAAGTCGTGACTCTCTGGCTGATCTGCCATCTTTAGTCTCTTTGTATAATATCGCTTTGCACTGGCGTACTCCACTTCTCTGGAGGACAAGCAGTGCCTTCTTCTGTGTTCaaatttagtgttaaataattcacAGTGAAATTGTTTCTGCGCATCTCGTTTTTTCCCCTGCTGACTAGTGCTCTTTGAAACCTATCATTatcattaaaggacaattctggcggaaaacgaacctagggattaataacagatgtgtacccactcgatcgttctctgggacatgttttcatgctaatcaaatgtgtttgtagcttgaaacaagctagcctGGACCGTTGATTAGCTTACAGCGCTAGTAtttggggcacagggaaagtaaaaacaaatcgctatttataccactaaaaaggctcaaactATCACCAcgcttcaacggtagcatacatgttaactgaagcattgagaacatgtCTGTacaagtgtacagacagtttattaaaaagatagtttagaaagacagtagctCCCAAGACAGCGGCCGCCTATTTACGAGAACACAACTGTTTTTataatactagcgttgtaagctaatcagcggtccgcgctagcttgtttcaagctacaaacacatctgattagcatgaaaacatgtcccagagaacgatcgagtgggtacacatctgttattaacagGTTTGTTTTgagccagaattgtcctttaaatcatttaatctatgaaatagttaaaaaaaaaaaaatgaccatcACAGTTTCAGAGTCCAAAGGCGTCTTCtattgtcttgttttgtccgaccaacagtccaaaacaccAAAGAGATTCAGTTGACTCCTGATGTGAAGCAGATAATGTACGACACTGGAGGAACTGACACCAGTTCCTTTGAAAACAGAGACCTACGCCACCTTGTGCCTCTGCACTGAGCTGTAGCGCTGGACAAAAATGGACAAACAATTCTTTTCTATTTATACTTTAGTTTGATTTGTACTGGGTCTTCTTCTTGATACCGAGTCTCGTACAGACTTGCTGAAGAATACCAAAGAGACCAACTGGGAGCTTCGGGGCAGATTTCTGTAGCTGTCACGATACAACAAAGAAGCCGGTAgatttgtgtttatttactgtataaatAATACAAACGTTCCATCAACTCAATCATCACAGTAAAAATACCTTGAATTCATTAGTTGTTATCAGCTTTACAGTATGTCGCctacatttttataatttgaTAGACCTGACAGATTCGAGGGACCTACACATCATGTTAGTGTGTCCTGCTCTCTGTGGCCTAAAAcgtgcaaaaaaaaatgtcaaagcgCGTGCGTGTGTCAACTCTCCAAAGCAGCAGTTTGTCACGTTCTCTCCCTTAACGACTCATCTTGGCTGCTGCACGTTTGTCTGACACTTCTGgtgctgcaggtgtgtgtgtcactttttaaattttttcccATTTATTCCTGTGAGCTTTTGCTACCACGTGCAAAACTTTTTTTGTTCTCTTATCGTCATGTGGTGATGCACCTGAAAGCAGAGGCTGATGGGAAAACTCTCCCTGCTGGTGCGTTCAAAGATGCTCAGACGTCTGAGGTATAAATGCAGCAGTAGATCAGCTTGGACTTTAATGGTTTACTTGTTTGACTTTTTTACACCAGAGCTCCTTATTGAAATATTTTATGACGGATGTCGGAGCATCTTTAAACGCACCATCTTGGCCAGTGTTGAAAATGGTCTCTGCTCAGCATCGGTAGATTAATTCATACGTTTAACAAGAGGTGTTGAAATTTTTCATGAGATTTATTCGATTTTTCTCTTTAATTTTTATTAAGAGAAGTGATTTTGGAAGAAAATATGATTTGTGAACATATTATTTCTTGATATTATTTCATGGATTTGACCTCAGAGCTGCAATAAGCAGCTCCTTCCAACAGAGGGCAGCAGATCTAACATCTGTTTATTACAGTATTATTGTAGATAATCAGCCAATCAGGAGAGACCATATATATCATCTGAATATTATCATCACAAACCTGATTTTAATCATCATCAGActgaattaatttttttatttttcagttcgaaattaagaaaaaaatccTTATCATGCTTTCCTCTCTGCGGTTGTGTACAGATGTCTTGTGAGTTATCAGCTGTGTGGAGCCTGTAAATCTGAAATAAATCCTGATTTTTGATGTATTA

Function

NR:

description
PREDICTED: docking protein 2-like

GO: NA

KEGG:

id description
K20234 DOK2; docking protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804189.1 True 4777 mRNA 0.47 8 14646727 14666265

Neighbor

gene id symbol gene type direction distance location
LOC120560602 LOC108248102,LOC106527805,LOC101064502,LOC101174676 coding upstream 4515 14626621 ~ 14642212 (+)
barhl1a NA coding upstream 83028 14556389 ~ 14563699 (+)
cfap77 NA coding upstream 91247 14548679 ~ 14555480 (+)
pla2g1b NA coding upstream 192481 14450851 ~ 14454246 (+)
prkab1b LOC103353610,LOC101165238 coding upstream 201575 14437825 ~ 14445152 (+)
grin1b grin1,LOC101175170,LOC102209996,LOC108248095,LOC107386166,LOC101469542,LOC102312845 coding downstream 11406 14677671 ~ 14753400 (+)
kazald3 kazald1,LOC107097908 coding downstream 101451 14767716 ~ 14772152 (+)
LOC120560087 LOC103371518 coding downstream 175806 14842071 ~ 14867655 (+)
prdm12b LOC102306279,LOC102776562,LOC102208027,LOC101478941 coding downstream 212363 14878628 ~ 14886454 (+)
c5 NA coding downstream 225307 14891572 ~ 14924937 (+)
G61468 NA non-coding upstream 147293 14499180 ~ 14499434 (+)
LOC120560938 NA non-coding upstream 147670 14497781 ~ 14499057 (+)
LOC120561032 NA non-coding upstream 174538 14469197 ~ 14472189 (+)
LOC120561034 NA non-coding upstream 181002 14465003 ~ 14465725 (+)
G61450 NA non-coding upstream 242555 14403633 ~ 14404172 (+)
G61513 NA non-coding downstream 9872 14676137 ~ 14677372 (+)
G61539 NA non-coding downstream 360176 15026441 ~ 15027400 (+)
G61540 NA non-coding downstream 361340 15027605 ~ 15027818 (+)
G61730 LOC102301232,LOC102776762,LOC101476977 non-coding downstream 479835 15146100 ~ 15152551 (+)
G61756 NA non-coding downstream 557849 15224114 ~ 15224465 (+)
LOC120560925 NA other upstream 212130 14431330 ~ 14434597 (+)
c6h12orf43 NA other upstream 254144 14389471 ~ 14392583 (+)
G61390 crybb2,LOC108234953,LOC100703162 other upstream 327221 14317539 ~ 14319506 (+)
G61383 NA other upstream 362856 14283417 ~ 14283871 (+)
LOC120560400 tmem150a,LOC106585116 other upstream 364956 14252256 ~ 14281771 (+)
G61514 surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 33260 14699525 ~ 14794602 (+)
LOC120561401 NA other downstream 89185 14755450 ~ 14762549 (+)
surf4l surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 108248 14774513 ~ 14795943 (+)
cntrl NA other downstream 262108 14928373 ~ 14979797 (+)
G61535 LOC103368073 other downstream 412609 15078874 ~ 15083448 (+)

Expression


Co-expression Network