itga2.2 (itga2)


Basic Information

Item Value
gene id itga2.2
gene name itga2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 26981345 ~ 27002644 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804261.1
TGAGTCTCCACGCTGCGCAGCCACAACTTTAACAAGTGCGGCGGCTTCATTTAATCACCTCATACAAATGGAATAAAGACAACGATGGAGTTCTTCTGGGGACATTTCTTCTTCACTATAGTAGTCATTACTGACAGAATCTGGAACTCACAGGCCTTCAACGTCGGCACTGCAGGTGCCAAGATTTTCAGCGGACCAGCTGCGGAAGAGTTTGGCTACACAGTCCAACAAGCGACCAACCATGAAGGCAAATGGCTCCTCGTTAGTGCCCCATGGAGTGGTTTCAGTGGAAACAGGAAGGGGGATGTTTACAAGTGTCCAGTCTCAGGGTCCAGAAACAGCTGTGACAAGCTCAATCTTCAAGATTCTGTCAGTATTCCAGATGTTAAAAACATCAATGAAAAAATGTGCCTGGGTTTGACTCTTACCCGGATGCCTGCAGGGTTGATgATGTGCGGTCCTCTTTGGGGACAGCTCTGTGGCGATCAGGACTTCTACCCAGGAATATGTGCAAAAATGAGCCCCCTCTTTCAACCTCAACCTGCCTTCTCTCCTGCCATCCAGACATGTGGAGGGCCTATGGACATCGTGATTGTTTTGGACGGCTCCAACAGCATTTATCCTTGGGATCCAATGGTCTCCTTCCTCAAGAAATTAATACCTGCACTTGACATCGGGCCCAAAAACACACAGGTCAGCGTCATTCAGTATGCTGTTGATCCCAAGATTCAAATCAGACTAAATGAGTATAAAACCAAAGCTACGTTGATCGATGCAACGTCCCGAATCACACAAATGTATGGTCAGTTAACCAATACCTTCCATGCGATCCAATATGCCAGTCAGCAGGGATTCCATCAAAGTAACGGCGGTCGATCAGGTGCTGCCAAGGTGTTGGTGGTCGTCACTGATGGGGAGTCTCACGACGAGGATATCCGAGATACAGTTATTGCCGACTGTGAGAGACAAGGCATCACCCGCTTTGGTATCGCTGTCCTGGGTTATTACACCAgaaacaacatcaacacagACAACCTGATTAAAGAAATCAAATCCATTGCCAGTCTGCCCACAGAGAAGTACTTCTTTAATGTGTCGGAAGAGGCAGCCCTCTCCACCATTGCTGAAAAATAAGGGGGGcgttttttatataaaaaAGGCACTGGAAAAGGGATGGGCAACTTCGAGATGGAGATGTCCCAGGTCGGATTCAGTGCTCACTACTCCAGCAAACAGGATGTGATGATGCTGGGAGCAGTGGGAGCCTACGCTTGGAGCGGGACTGTGGTCCATCAAACAGGGTCAAAAGTAGACATTCTCCCTTTCTCAGCCTTTGAGGGAACCCTTCAAGACAAAAACCACAGCTCGTTACTGGGTTATTCTGTCACCACACTGAGCGATGGGTCTACAGAATACTTTGTGGCTGGTGCACCTCGCTCCAACCACTCTGGACAAGTTATCGTGTACACCGTCAATGCCCAGAAGCAATCTGCCATCATAGACTCAGAAAGAGGAAAACAGATCGGGTCATACTTTGGGAGTGTCCTGTGCCCCCTGGACGTGGACAGAGACGGGGTGACGGACCTCCTGCTGGTTGGTGCGCCCATGTTCATGAGCGATctgaagagagaggaaggcagGGTCTACCTCTTCTCTGTCACCAAGGGTATACTGAATGAGCAAGGATTCCTCAACGGTCCGCCCCCAACTGAGAACGCACGTTTTGGGATGGCCATCTCTGCCGTTCCTGACCTGGACCTCGATGGTTATAATGACGTTGTAGTAGGAGCCCCACTAGAAGACACAGGTAAAGGTGTCATCTACATCTACAACGGGCAGCTGAAGGCATTAAACAAACAGTTCTCACAGAGAATCTTTGGCTCCAAACTGGATCCTCAATTGCAGTATTTTGGAAGGTCCCTGGATAGCTACATGGATCTGAATGATGATACACTCCCTGATATTTCCATTGGTACATATGGCAAAGTGGTGCAGCTCTGGTCCAGAGGTGTGGCGTCTGTCTCGGCTAAAGCTTCTTTCAACCCCGATAAAATCAACATTTTCAACAAACCCTGTGACATTAATGGACGCAAGCTTTCATGTTTCACCACTAACCTCTGTTTCAGTGCTGCATTTAGGCCCAAGAACCCTGTTGGACCCATTGATATATCTTACACTTTGACTCTGGACGCGGACTTGCATGCTTCACGAGTGATGTCAAGAGGACTGTTCACTAAAACCAACGAACGCTTCCTCACAGAAAAGGCAAAAATATCATCTGCGTCCCTGTGTCGGGACTACCAGATTTATATTCAGGAGGCACCAGACTTTGTCAATTCCCTCAGTCTGAAAGTAGAAATCGAGCAGCAGAATGCAGATGTGAACCCTGTCCTCGATGTGTTTTCTGGAAGTGCCTGGGAATTCTTTATCCCCTTCACAAAAGACTGCGGCTCTGATGACGTGTGTGTCAGTGATCTGGTGCTGAGTGTAAAGACAGCCACAAAGGCGTCCAGCTCAGCTCCCGTTCTGGTCAGCGCTAATAACCGAGAACTGTCATTTGAAGTTGTCGTGAAGAACAAAAAGGAGAACGCGTATAACACTCAGGTCTTGGCCACTTACTCTGACAACCTCTACTACTCCTCCGTCTCTCCTCCTACGGATGAAGTCAAATGCacttcaacacaaacacaagccgTCACCTGCCAAGTGGGATACCCAGTATTAAAACAAGACCAAGAGGTGAATTTTCGGATAAATTTTGATTACAATCTTGATCAGCTGCAAAACCGAGCCGAGGTGAAGTTTGAGGCCAAGAGtgaTGGTAAAGAAGAAATACCTGCAGACAACAAAGTGGACATATCCATTCCTGTTCGATATGATGCAGGGATTGTTTTATCTAGGCAGTCAAATATCGATTTCTACGTGGCAGATGCTGCAGTTCCCGTGGTAACAACGGTGGCGAGTCTAGATGACATCGGCCCAGAGTTTAACTTTACAGTGAAGgttTCAACAAGTAACTTCCCCATCAACCTCGTGTATCTGACCATTGCTCTGCCAGTGACCACTAAAGGTGGAAATCAGCTCCTCTATATTACCAGTGTGGACACACAAACTGGAGGTGCTGTCAGCTGTGATTCCAGCAGCTTGGTCGATCCTCTGAAGATCGGAGTGAAGAGCCACAAAGTGTCCTTCTCTGAGGAGAGTCTCCGAGGCATGCAGAAACTGGACTGCAAGAGCGCAAAATGCGAGTATATAAAATGCATCCTCAAGGACACTGAAGTCAAAAGTGACTACTTTGTGAAAGTTAAAACAAGGATCTGGAGTGGCACATTTATTTCGGCCACCTATCAGACCATCGAGCTGACCTCCACTGTTGATGTCGAGACCTCCGACCCCAACCTGCTCATTATCGACCTCAAACACCTGCCAgTGGTGGTGACAGTCAGTAAACCTGGAGAGAAAGGTGACGTTCCAGTGGGAGTGGTAGTTGGCAGCGTCATTGCCGGACTGCTGCTGTTGGCTCTGGCTGTTGGACTGCTGTGGAAGtttgggtttttcaaaagaaaGTACCAGCAGCTTCAGAGGGAGGCCGATGACGACGCGCAGAGCCACGCACATGTTGACGAAGTGCTGTGAACTGAAGAGAAAACCTGCTGCCTTTTCTCTTCACTGGAATGTTTCCAGTGTGGATACTGGTACTTGTCACTGGTTCTCGTAAAGTACAAATGGACTACAGTTCAATCACTGGAAGTTGGACATTTGAATAAAATGGAAGCTGTTCAGTTTGAGGATAACTGGGATTCGATACTCTGTCCATTTTTAGAGAGGATTAATGTTATGAGTCTTTATTTTTAAGCTTTGTGGCCTTTACATTGACTACTTGCTGTTATGCACTGACTTTGAATAATTGTAAGAACTGTATTTTTTCCCAACATGACAGAACCATATACAGTACTTGTATTGTACTTGAGTTTTACACTGTAAAGCGATCTAATTCATCCATCGCTTTTTGTTTTGACAACTTCTGGGCAAAATGATCGAACAATCTTATATTGAATATAGCTCATTTGTCAAAACATTGACCTTTTTATCGGACAGTCTGTAGCATAAACTGCCTTGAGATTAACTGTCACTTCTGGCACTTTCTTGCATTAAGACTATTGCTATCAGTATTTTAAATGCAAATAGGAAACAATAACTATCCTGGAAAGAGTGAAATCTGTCATTCCTCTGTTCCATTGTgttttactgtatatactgtaagaTAAAATGATCTTTCATATTGGGTTTAATACATGAAACGATTAGAGGCGATATGGGTCCATGGACTAGCTAATTgtggtggtgttgttgttgttgttgttgttgttattgttgttgttgttattgattGATTATGATATTGgtgatattttgttgttgtttttaccaCTAATAGAACAGCTTGTCAGGTATGAATGTTTTAGTAGcatattgtgttttttataaTATGCTGGTTATTTTTTGAGTCATCGATTAATGGTTTTGCCCATTCAATTTCAGAAAATAGTTTCCTGGTTCCAAGGTGAATTATTTCAAAttggttgttgtttgttgtcCAAACCCTACATTACTGCCATATAAGACAAAGGAAAGCAATTTGAAACAGCAAATGTTTGGGATTTTTTTGTTCTAACCATtaaattgattatcaaaatagttgcagatacattttctgttaatcaactaattgattcagCTCTAATAATGTTTATCTGTAGGCCAAAAGGACACAGTGCcccatgtgcaaatatttttcacTACAGAGAAAAAGTGTCAAAGATGGTGCATGATGGTTGCCAAAACACCAACCAGGTTAATTTACTCCCTAAAAACACCTAATCTGTACCTTTGTTTCTTTCTTACAGTAGGCAGTTTGAGAGAGTGAAGTGAATCCTGCAGGATCTAAATGTGTATTGGCACAGCTTTGCCACTAGATGGTAGCATGATATAGATGACATGTTGGTACTGTTGAGTATTTTTTCACTGCTCTGTTGATGACTTAAACACTCCATGCCTCTATCAATTAATGCATTCGAATTTATGACCCATTTTGGATTGtgtttctcctcttctctcctctctggtcCCCTCTCCTAACCTGACCCAGCAAGGAACCGTACTTGGACCACTTCCTTCCAAACGTCAGTACAATTGAAGTTTTCCCTCAAACTCGATTAATTTCCTATCACATTTTTGACTGTCGTGTTCTCCCACAGTCAGGTTAGTTTTTCCCTTGACTATGTTGGAATGTGTTTCTGAATGTTTTTCCTTTGAATGAGCCAAGTAACTCCAGCACCCAGCAGAGTCTTTAGCATTCATTTCTCTGGATCTGGCAAGGTGGAATATGCTATTTGTCTCTCATAAGAAGCATATTTTTTGGGGAGCCTGGGCTTGAGCTTTTCTTGTTGGAGGGGATATAGAATTTGACGATTGAAATGCTCTGTTTCACAATTACTGATGTATTGATTGTGAAATAGCCTTTTGATTCTATCTATATGTGTGCAGGGAGCTTTGTGGAAATGGTCGATGAAATGTGATACAATGGAAGTGTTTGAACACATTTGTAGATTCATCCCTCTTGGGTTTCCTGCAGATGATTTGCAGTTCCAGCCAAACAACTGACCCATGCCACAATGGGATGATTGCTCACAAATCGCTGCAATGTTGTAAATCAAAAATGATGTCATAGCAAATTATTTAATATCTGTTTGCCTTGTTTTGCACTTTGAAAGACCGTTAGTGTTACCTATCGGTTTCATTGTAACTACttttaagacattttacttttacttctattGTCATTAACTTGACAGGTCctgaatttgacatgtatttGATTTGATAATAAAAACTTGGAACAATT

Function

symbol description
itga2 Enables collagen binding activity involved in cell-matrix adhesion and collagen receptor activity. Involved in several processes, including cell adhesion mediated by integrin; cell surface receptor signaling pathway; and mesodermal cell differentiation. Located in cell surface; focal adhesion; and plasma membrane. Part of integrin alpha2-beta1 complex. Implicated in several diseases, including Behcet's disease; artery disease (multiple); blood platelet disease (multiple); diabetes mellitus (multiple); and von Willebrand's disease (multiple). Biomarker of type 2 diabetes mellitus.

NR:

description
PREDICTED: integrin alpha-2

GO:

id name namespace
GO:0007229 integrin-mediated signaling pathway biological_process
GO:0007155 cell adhesion biological_process
GO:0008305 integrin complex cellular_component

KEGG:

id description
K06481 ITGA2, CD49b; integrin alpha 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804261.1 True 5905 mRNA 0.44 30 26981345 27002644

Neighbor

gene id symbol gene type direction distance location
paip1 paip1,LOC104941454 coding upstream 6406 26965484 ~ 26974939 (+)
fgf10b fgf10,LOC104956796 coding upstream 19353 26952220 ~ 26961992 (+)
adamts12 adamts12 coding upstream 35878 26924528 ~ 26945467 (+)
myl7 myl7,LOC101480470 coding upstream 70917 26908203 ~ 26910428 (+)
gck gck coding upstream 73826 26901799 ~ 26907519 (+)
fsta fst coding downstream 2495 27005139 ~ 27011321 (+)
snx18a snx18 coding downstream 176716 27179360 ~ 27193519 (+)
LOC120560992 LOC106926053,LOC103469987,LOC103145901,LOC108233650,LOC105928392,LOC106519893 coding downstream 306556 27309200 ~ 27324830 (+)
mthfd2l mthfd2l,LOC102288655,LOC100709995 coding downstream 391773 27394417 ~ 27417204 (+)
LOC120560091 NA coding downstream 416065 27418709 ~ 27420717 (+)
LOC120560738 NA non-coding upstream 81787 26897902 ~ 26899558 (+)
G64967 ykt6 non-coding upstream 85202 26893701 ~ 26896143 (+)
G64949 btf3,LOC103470010,LOC107089645,LOC106958054,LOC106926613 non-coding upstream 152160 26761391 ~ 26829185 (+)
G64944 NA non-coding upstream 297090 26682518 ~ 26684255 (+)
G64930 NA non-coding upstream 317819 26662767 ~ 26663526 (+)
G65083 NA non-coding downstream 197305 27199949 ~ 27200190 (+)
G65106 NA non-coding downstream 376354 27378998 ~ 27379215 (+)
G65108 NA non-coding downstream 386813 27389457 ~ 27389862 (+)
G65171 NA non-coding downstream 474104 27476748 ~ 27476966 (+)
G65272 NA non-coding downstream 900431 27903075 ~ 27904933 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other upstream 319450 26644661 ~ 26661895 (+)
cltcl1 LOC100691387,LOC103359525 other upstream 337178 26614237 ~ 26644167 (+)
c6h22orf39 clg12h22orf39 other upstream 484358 26494284 ~ 26496987 (+)
G64814 cldn5,LOC103357131 other upstream 566748 26412869 ~ 26414597 (+)
nsd3 whsc1l1 other upstream 597502 26359120 ~ 26383843 (+)
ndufs4 ndufs4 other downstream 9566 27012210 ~ 27039599 (+)
G65084 lipg other downstream 202590 27205234 ~ 27370959 (+)
mboat4 NA other downstream 1842982 28845626 ~ 28849471 (+)
ubac1 ubac1 other downstream 2341936 29344580 ~ 29351756 (+)
fbxo21 fbxo21 other downstream 3184204 30186848 ~ 30212108 (+)

Expression


Co-expression Network