LOC120561237


Basic Information

Item Value
gene id LOC120561237
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 17615141 ~ 17618859 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804266.1
CTTGCCTTGTGCTTACAGCTTTGCTTGGTCACACAGTATAACATGTCAGATAGGGTTAAGAGCTTTTCAGTGGGATATAATCCCATAAACCACAGTGATATTTTCACCAGTGGTGACTGTATTACAGGACACATTACACTAGAACTGTCAAAAGACTGCAAAATAGATTCACTCAGTGTAAAGCTGAAGGGAAAAGCACAAGTCAAATGGACTGAAACGCATGGGAGGACAATCGTAATGTACAGTAACAAAGAGAAGTACTTCAGTATCAAGCAAGTTATCATTCAGGAGGGCCAGGGTAATAATGTTGTTGGCCAGGGCTCCCATGTCTACCCTTACAACTTCCAGATCCCTGCAGAAGACCTGCCATCCTCCTTCAAAGGCTCATATGGAAAGATACAGTACACACTGGAGGCAAATCTGAGCAGGTCAATGAGAGTAGACACCAAAGCTAAGGTGAAGTTCACTCTCCTTTGCAAAGGAAACCTGAACAGTGATCCATTGCTGATGACTCCACAGCACAGTATcactaataaaaaaatgaagctCTTTACATCGGGGACAGTAGGCATGGATGTAAACATTGCACGAACAGGCTACTACCAAGgGGAAGGCATAAAGGTTGTGACATCCATTCAGAACAGATCATCTCGTGACATCAAGCCCAAATACTGTCTGTATTTAAAGTGCAGTTATTTtgcaaagaggaagaggaaagtgGAAACCAAAGACATCCTGAAAGAGGTGGGTGACGCCATCCCACCTTCTGCAGGTCAGACTGTCACCAGGATCATCACCATCCCTCCCACCACGTGTGCGTCCATCTTAAACTGCAACATCATCAAAGCAGAGTACAGACTCAGGGTCTATCTGGATGTCAAGTATGCTTCAGACCCCGAGATCAAGTTCCCAATAGTGATTCTGCCCGCTTTACAGGGGCCTGATGATGGGGAGCATCTGCCTGCTTATCCTACCTTCTCCCATTTTGCTTAGTCCCTGTTATCCAGGCAAAGGGCAAGAATGATTTATGTCATGAATGAGTCTCATCATGTGACTCATTCATCACATGCTGATTGATTAATGATGTAAGTTGTTTCACTGGACTGGAGGTTTTTTTATCCACCCAATGTATTTCAAAGAGAGTCTTTGCCTGTCAACTGATTTCATATGAACAAGACAGCTCTGACATTTAAGGTGGTAAAGTTCATACCTGTGTAAACTGATGAAAATAACACCTTCccatctgtttttttgttgctgtgtgaAACAGATTACAGTTTAGCATTTTGAATGAAAGATTATTATAGGGGTAATATTAACATCAGTTTAATACACCTACAGCAAACAGTCCAATAAATTCTACCATTAAGAAACCATAATGTCCAAGTTTATTTGACACAACATGTGTGTTTGGATTGCATTTACTGGAAGGTAATAATTTGCCCTTGCCCACTGAGATGAAAACAGCCAGAAACCATCTGAAAATA
>XM_039804267.1
CTTGCCTTGTGCTTACAGCTTTGCTTGGTCACACAGTATAACATGTCAGATAGGGTTAAGAGCTTTTCAGTGGGATATAATCCCATAAACCACAGTGATATTTTCACCAGTGGTGACTGTATTACAGGACACATTACACTAGAACTGTCAAAAGACTGCAAAATAGATTCACTCAGTGTAAAGCTGAAGGGAAAAGCACAAGTCAAATGGACTGAAACGCATGGGAGGACAATCGTAATGTACAGTAACAAAGAGAAGTACTTCAGTATCAAGCAAGTTATCATTCAGGAGGGCCAGGGTAATAATGTTGTTGGCCAGGGCTCCCATGTCTACCCTTACAACTTCCAGATCCCTGCAGAAGACCTGCCATCCTCCTTCAAAGGCTCATATGGAAAGATACAGTACACACTGGAGGCAAATCTGAGCAGGTCAATGAGAGTAGACACCAAAGCTAAGACTCCACAGCACAGTATcactaataaaaaaatgaagctCTTTACATCGGGGACAGTAGGCATGGATGTAAACATTGCACGAACAGGCTACTACCAAGgGGAAGGCATAAAGGTTGTGACATCCATTCAGAACAGATCATCTCGTGACATCAAGCCCAAATACTGTCTGTATTTAAAGTGCAGTTATTTtgcaaagaggaagaggaaagtgGAAACCAAAGACATCCTGAAAGAGGTGGGTGACGCCATCCCACCTTCTGCAGGTCAGACTGTCACCAGGATCATCACCATCCCTCCCACCACGTGTGCGTCCATCTTAAACTGCAACATCATCAAAGCAGAGTACAGACTCAGGGTCTATCTGGATGTCAAGTATGCTTCAGACCCCGAGATCAAGTTCCCAATAGTGATTCTGCCCGCTTTACAGGGGCCTGATGATGGGGAGCATCTGCCTGCTTATCCTACCTTCTCCCATTTTGCTTAGTCCCTGTTATCCAGGCAAAGGGCAAGAATGATTTATGTCATGAATGAGTCTCATCATGTGACTCATTCATCACATGCTGATTGATTAATGATGTAAGTTGTTTCACTGGACTGGAGGTTTTTTTATCCACCCAATGTATTTCAAAGAGAGTCTTTGCCTGTCAACTGATTTCATATGAACAAGACAGCTCTGACATTTAAGGTGGTAAAGTTCATACCTGTGTAAACTGATGAAAATAACACCTTCccatctgtttttttgttgctgtgtgaAACAGATTACAGTTTAGCATTTTGAATGAAAGATTATTATAGGGGTAATATTAACATCAGTTTAATACACCTACAGCAAACAGTCCAATAAATTCTACCATTAAGAAACCATAATGTCCAAGTTTATTTGACACAACATGTGTGTTTGGATTGCATTTACTGGAAGGTAATAATTTGCCCTTGCCCACTGAGATGAAAACAGCCAGAAACCATCTGAAAATAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804266.1 True 1487 mRNA 0.42 6 17615145 17618859
XM_039804267.1 False 1437 mRNA 0.42 6 17615141 17618859

Neighbor

gene id symbol gene type direction distance location
LOC120560528 vcan,LOC102793126 coding downstream 79973 17482640 ~ 17535168 (-)
LOC120560423 rasa1 coding downstream 559459 17022538 ~ 17055682 (-)
LOC120561320 NA coding downstream 1066574 16547281 ~ 16548567 (-)
nol6 nol6 coding downstream 1068669 16531652 ~ 16546472 (-)
aqp3a LOC103362379,LOC108242818 coding downstream 1095825 16512377 ~ 16519316 (-)
f2r f2r,LOC100706519,LOC102798097 coding upstream 95677 17714536 ~ 17718413 (-)
iqgap2 iqgap2 coding upstream 99769 17718628 ~ 17755600 (-)
sv2ca sv2c,LOC103357064 coding upstream 140382 17759241 ~ 17792494 (-)
ankdd1b ankdd1b,LOC104956917 coding upstream 191190 17810049 ~ 17815272 (-)
polk LOC102794864,LOC106580482,LOC107579148 coding upstream 196973 17815832 ~ 17824743 (-)
G62231 NA non-coding downstream 38589 17576219 ~ 17576552 (-)
G62230 NA non-coding downstream 39192 17575641 ~ 17575949 (-)
G62205 NA non-coding downstream 199795 17414652 ~ 17415346 (-)
G62183 NA non-coding downstream 548685 17065836 ~ 17066456 (-)
G62131 mef2c non-coding downstream 729192 16882821 ~ 16885949 (-)
G62318 NA non-coding upstream 222860 17841719 ~ 17842452 (-)
LOC120560086 NA non-coding upstream 277932 17896791 ~ 17899827 (-)
G62333 kif2a non-coding upstream 296067 17914926 ~ 17926955 (-)
G62339 NA non-coding upstream 312883 17931742 ~ 17933468 (-)
G62399 NA non-coding upstream 436392 18055251 ~ 18056143 (-)
LOC120561236 LOC102290490,LOC106517513 other downstream 10021 17598088 ~ 17605120 (-)
LOC120560614 NA other downstream 47127 17534483 ~ 17568014 (-)
G62209 hapln1,LOC103373858,LOC106939955 other downstream 134327 17478306 ~ 17480814 (-)
G62194 NA other downstream 490664 17123996 ~ 17124477 (-)
LOC120560425 NA other downstream 529320 17083479 ~ 17085821 (-)
pip5k1bb pip5k1b,LOC104956915 other upstream 234547 17853406 ~ 17895897 (-)
LOC120560503 vcp,LOC102783844,LOC103357444,LOC107393925,LOC107552546 other upstream 668430 18287289 ~ 18296704 (-)
fancg fancg other upstream 678734 18297593 ~ 18303862 (-)
G62580 tacc1,LOC101470878,LOC102206806 other upstream 758743 18377602 ~ 18380502 (-)
G62582 LOC106098714,LOC103357453,LOC102788116 other upstream 764146 18383005 ~ 18386269 (-)

Expression


Co-expression Network