lrrc75ba (lrrc75b,LOC104956515,LOC102775864)


Basic Information

Item Value
gene id lrrc75ba
gene name lrrc75b,LOC104956515,LOC102775864
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2600890 ~ 2616973 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804278.1
GAACCGGATGCAGCGATTGGTCGGACGCTCCACGTTGCTCCAACCTAAACAGCAGCGTAAAGCCGAGACGGGCCGGAGGATGAAGCAGCCGGagcatcctcatcatcatccgAGCCAGGCGCACGTAGCCGGCggtggagaagaaaaaaaaaatctaaacagcAACGTGCATGTGAGAGTGGTGATAAATTAGACTGTCGAGggaaagcgtgtgtgtgtgtgtgtgtgtgtgtgtgtggttgtggttgTGCACCGGATCCAGACAGCTACGCAGCGCCAGACAGCGCGGCGCTGTTTTCTACCATCCACTGAGGAGCATCTGAAAAACGGATCATGGGTTTGTCCTCTTTGTAACATTGTCTGCGCTACAACATCAACGCCGCCTGCGTCTGtaggaaaaacaacaacaccatGGGTTCCAGACTGAGCAGGCAGAGCAGCCTGGACAATGAGAATTTCTCCAAAAAGCGACGCAAGCTTCTAGATGGCACCGGAGAGAGCGAGTGCAGGGGCAGCCGAGGCGGCGGGGACTTTCTGTTTGCGCTGATGCTGAAATCGGACAAACTGCCCGGGATGCTGCGGAGGACCAACCACAGCCCGTACGTGAGGCGAGTGGCGTGGATCAAAGAGATCCAGAAGCTGCTCCGGGACCGCAGGATAGAGCAGGCAACCGACGTGCTCAAACTACTGAGGAAGGATCTTGGTTTGGAAGGTGCCTCGCTCAACGACATCTTGTACAAAAACGCTGCCTTCCTCAACCTGGTGGACCCCATCTCACACGAGCTGCTGCTCAGCCTGGCTCGAGAGATGCAGTGTCCTAAGAAGGATGCAGACACTATAAAGTCCTCTGATAAGATCTGCAGACAGCTGATCTACCACCTGACCCCGCACTCAAAGTGGCTAAGGCAGAGCATGTCCAGACGGAAATCCCAGGCCTGTCTCAAGACAACCCTACAGAAGAAGCTGTCCAGCGACTCGGTGGACCTGTCCGGCGTCCCGCTGTCCACCCGAGATGTCCGTCAAGTCGCCTTCTACCTCCAGAACAACAGAGACACCGTGATGGCCGTGGACGTCAGCTTCACCGAGCTCCAGGACGACAGCCTGAAGATCCTCCTGCCTCTTCTGGCCTCGCTGCCCAAACTCAGCACCCTGGCTCTCAACGGCAACCGCCTCACGCTGGCTATCCTGAAAGACCTCACCGAGATGCTCAAAGACCCCAAGATGTTCTCCAGCCTGGCCTGGATCGACCTGGGCAACAACGTGGACATCTTCACTATGCCTCAGCCGCTGCTGGTGGCGCTGCGCCGGCGCTGCAGCCTGAAGAGCAGTTTGCCGACTATCTACGAGTACACCGAGGGTCAGCCCTACTGCTACCACCTGGAGACTTCCATTGAGGAGCCCAGCCACTacgaggaagaagaggaggacgaCGAAGACGAGGAGGACATGGGGAACAAGTTTGAGCTGGAGCCGTGGAGTTTAGGGGAGAAGCAGCTCTCCAAAGACTTCACCCTCCACTACTGTGAGAGGTGATGGGGCATTCCCACTCGGAGGCTCTTTCTACTGTGGTCGACACGTCTTACGTCCCACAGCACTCCGTTTACCTCCTTCGCCCTCACACCACGAGCCCCGTCACCCCCTTTGGAGGCACGAGGGAGACCACATTGTGAACTTCTCGTCCCGACACGGCTACCAAGCTATCCCTAACCATCTCTGAGTTAACCCACACACGATGAGAGTGAAGCGACGACGGCGGACTTACTGTGTTGGTGGATGGCGCTCTTGGGAACAAGGTGCGGTTTCATTGGAGGGGGGCTGGAAGAGTTAATGAACcggtgctctctctctctctctctctctctctctctctctctctcctctctcccctctatcactctatctctctctctctgatagtGGCAGCTGAGGAGCCAATCCCAAGGAGATTTAGATCAGTTGGTTGGATCGAGGAGCAGCATCCCGGCGATGGCTGAAGTGGAATTGGTTTGGAGTTTGGAAACAGAGGGTCCCTCTGGGTTCTCTACCAGGACTGGGGCTATCTCTGGCAGGCAGGGCCTCGCTCCACATTGTGTGTTCTCTGTTAATCTCTCAACAAAAGCTATGACACAAGTTCAACAGACTATACAGCCGACGACCCGTCACGTGACGCCGGCAAAACTGCTAGGTCAAGACTTTTTGCGTTTTCCCCCCCTTTCCAAATGTCCACTTGTCAATACCCACGCAGCCCTTGTGTAGATGTAAatgaggacaaaaaaaacatggttcTCTTGTGTTTCCACGGGTTATTTTTGTGCACTCTTGGTGAACAAAGCAATCTTAGAAGACAACAGGTAGGACTCAACAATGGCTAGCTGTCACTGATTGTTTTTTGTACTCGCCTAAATGCTGATATTCACCTCTTTGTTAGTTATTGAGCTGTTGTAATCACCACCACAGTGTTTAAGTGCATTTATGACACCACAGCCAAGTGTTGGTATGGGCCACCGAGTCTGAGCAGCGCTGCCCGTCCTACTGCCGTTTGTCTCTACAaatatgttgtcatttccaTTAATTGATACCGTACTTCAGTGGCCCTATGCTTGTTATGAAACACAGCCACAGACTGTTATGTATTAATTATAGTCTGTCTTCTGTAGCACATAATGATTAAGTGAGACTGACTGAAAGCACTTTAggggactatttttttttttaaatatgtatttctGTTTCTCCTTAGCATATAATCTGTGTACATTGTTTATTATTAGAGATATTCACAAAGCTCAAGCTGACGCATACCTCTTTAAGGTGAAACGATGACCAAATGGCTCATGATTGTTAGAAAGTatcattgacaaaaaaaaaaaacatttgtgcatcgccacatatataataaatgttTAAGTGTGTGTCATATGTGTTTCTAATAGTAAAATGTCTGATTACTGCTGTAgtcatttgtgttgttgttctggTGTTTCGTCTATTGTCTGACTctgtaattataattataatgacTCTTATTATGAAACTGAGTGCAGTGACCTCCTGCTGTAAGCTTGAACAGTAAACAAAAAGCGACGTGGCTGATGGGATTACACAGTAAGACAGGAAATAGTTCAGTAAATGTAAGTTACAGTCAAAGCAGACACCTTTTCATGTCGAATGTTTTATTTGAATGATGGAGAGCACTGTCCCGTTGGTCCGTGTAGTTTCTTTCGTGTGTCAATGTCAAACTCTTCCTTGTAGCCTGTGTGTACTTGTCTCATTCCAAACACTGACTGCCAATAAAAGAACCGATCCTAACTGA

Function

symbol description
lrrc75b Predicted to be active in cytoplasm.

NR:

description
PREDICTED: leucine-rich repeat-containing protein 75B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804278.1 True 3313 mRNA 0.50 4 2600890 2616973

Neighbor

gene id symbol gene type direction distance location
anapc5 anapc5,LOC102800026 coding upstream 23840 2560749 ~ 2577050 (+)
LOC120560453 NA coding upstream 61757 2537954 ~ 2539133 (+)
LOC120561412 lrrtm4,LOC104959581,LOC103353625,LOC101488074,LOC100703069,LOC102799547 coding upstream 165948 2365750 ~ 2434942 (+)
LOC120560154 nefl,LOC102797482,LOC104959585 coding upstream 334147 2262909 ~ 2266743 (+)
klhl22 klhl22 coding upstream 397824 2192912 ~ 2203066 (+)
asphd2 asphd2 coding downstream 13531 2630504 ~ 2634683 (+)
cabp1a cabp1,LOC100709699,LOC102206763,LOC102781601,LOC104946293 coding downstream 23179 2640152 ~ 2654597 (+)
mlec mlec coding downstream 39538 2656511 ~ 2662450 (+)
LOC120561358 LOC104949113 coding downstream 267788 2884761 ~ 2889848 (+)
LOC120561351 NA coding downstream 280567 2897540 ~ 2913826 (+)
G58603 NA non-coding upstream 70167 2530492 ~ 2530723 (+)
G58601 NA non-coding upstream 74620 2526052 ~ 2526270 (+)
G58599 NA non-coding upstream 76323 2524207 ~ 2524567 (+)
G58598 NA non-coding upstream 76956 2523641 ~ 2523934 (+)
G58597 NA non-coding upstream 77252 2523439 ~ 2523638 (+)
G58618 ggt5,LOC104956559 non-coding downstream 7144 2624117 ~ 2625352 (+)
G58650 NA non-coding downstream 46430 2663403 ~ 2665691 (+)
G58651 NA non-coding downstream 48845 2665818 ~ 2667041 (+)
G58652 NA non-coding downstream 50285 2667258 ~ 2667835 (+)
G58653 NA non-coding downstream 51113 2668086 ~ 2668677 (+)
dock5 dock5 other upstream 288225 2273678 ~ 2312665 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 1763029 789405 ~ 837861 (+)
LOC120560799 NA other upstream 2388507 210742 ~ 212383 (+)
lman2lb NA other downstream 261401 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 818192 3435165 ~ 3522756 (+)
G59086 NA other downstream 1500306 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 1807168 4424141 ~ 4429981 (+)
trnal-aag_1 NA other downstream 1815198 4432171 ~ 4432253 (+)

Expression


Co-expression Network