LOC120561256


Basic Information

Item Value
gene id LOC120561256
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 12944844 ~ 12948355 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804293.1
ACTAATGGCTTTCAGAATTAGCATGTGAAGAATATGGATCATCCTGAAAACAACAATGCTGAGTCATTTTCAAAAAGGATGGTGGCACAATGAAATAATTACAGGCAAGGGCTGGGTATCTGTCTCCTCCTACGCATCGACGAGGAGGGAGAGGTCTTTCTCATAAATACTGACTTCAAGACAGCAAAGGGAACTGTATCTTCACAGGACATCCCTCCAGACCCTGAACCAGCCTTCATAACCACATGCACAATGGCAGATGCAAGCTTTCAGCGGGAGTTCCTGGAAACCCACAATGCCTACAGGCTGAAGCACAACACGCCAAAGATGACCCTTAGCAGCGAGCTGTCTGCTTCAGCTCAGAAATGGGCCAATCACCTGCTGGCAATCAACGCCCTGCAACACAGTAAAACTCAGGACGGAGAGAACATCTACAATATGTGGAGCTCAGCAACCCTTAAACTGACAGGGAAAGAAGCTGTAGATTCGTGGTACAGTGAGATCAAGAATTACAACTGGAGCCGCCCTGGATTCAGCAGCAATACTGGTCATTTTACTCAGGTGGTGTGGAAAGACAGCAAAGAACTGGGTGTGGGCATGGCCACTGATGGCCACAAGGTCTTTGTGGTTGGGCAGTACCGGCCAGCTGGCAACATGAACATGCCGGGATACTTTGAGAAAAACGTCCTCCCAAAAGCGTAAAAGACAGCTGGCAGAGAGGTGGGTGGAGCAGACAAGACTTCCAGTGAGGAAGGTTCAGTGAGCCCAAGGAAAACTTcacactgctgtagatccttgACCATTACTGCGACCCACTGTTGCTAAATGTTccatgttgtaaaaaaaaagtaaaatacatcaaataaaaaa

Function

GO: NA

KEGG:

id description
K24835 GLIPR2; glioma pathogenesis-related protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804293.1 True 870 mRNA 0.47 6 12944844 12948355

Neighbor

gene id symbol gene type direction distance location
tubb2b tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 coding downstream 21139 12921169 ~ 12923705 (-)
LOC120561416 entpd2 coding downstream 252498 12673697 ~ 12692346 (-)
nelfb nelfb,LOC102791926 coding downstream 275718 12652618 ~ 12669126 (-)
LOC120561146 LOC104923795 coding downstream 301688 12641855 ~ 12643156 (-)
arrdc1a LOC103353853,LOC104923796 coding downstream 309721 12610416 ~ 12635123 (-)
LOC120561258 NA coding upstream 77060 13025415 ~ 13031917 (-)
LOC120561259 NA coding upstream 88473 13036828 ~ 13038447 (-)
LOC120560514 LOC107752212,LOC107675959,LOC107679452 coding upstream 111135 13059490 ~ 13060793 (-)
LOC120561257 NA coding upstream 136128 13084483 ~ 13094496 (-)
LOC120561314 nr5a1,sf-1 coding upstream 701537 13649892 ~ 13686906 (-)
G61119 NA non-coding downstream 70228 12836649 ~ 12874616 (-)
G61128 NA non-coding downstream 98558 12837971 ~ 12846286 (-)
G61124 NA non-coding downstream 156524 12786963 ~ 12788320 (-)
G61085 NA non-coding downstream 298277 12646366 ~ 12646567 (-)
G61084 NA non-coding downstream 299892 12644728 ~ 12644952 (-)
G61151 NA non-coding upstream 26534 12974889 ~ 12975146 (-)
G61154 NA non-coding upstream 29397 12977752 ~ 12978029 (-)
G61161 NA non-coding upstream 58891 13007246 ~ 13007459 (-)
G61193 NA non-coding upstream 233232 13181587 ~ 13182319 (-)
G61195 NA non-coding upstream 234235 13182590 ~ 13184478 (-)
LOC120561038 LOC102778062,LOC101486272,LOC102199534,LOC108245630 other downstream 389559 12293707 ~ 12555285 (-)
LOC120561001 whrn,LOC102797690 other downstream 883198 11901650 ~ 12061646 (-)
abca2 abca2 other downstream 1351184 11285385 ~ 11593660 (-)
G60715 NA other downstream 1755103 11189142 ~ 11189741 (-)
unc5db unc5d other downstream 2425877 10122152 ~ 10518967 (-)
G61264 NA other upstream 640684 13589039 ~ 13589332 (-)
si:ch73-138n13.1 LOC102794857,LOC107084631 other upstream 1379796 14328151 ~ 14364326 (-)
trnaa-agc_14 NA other upstream 1990620 14938975 ~ 14939047 (-)
trnaa-agc_15 NA other upstream 1996141 14944496 ~ 14944568 (-)
trnae-cuc_15 NA other upstream 2000404 14948759 ~ 14948830 (-)

Expression


Co-expression Network