LOC120561257


Basic Information

Item Value
gene id LOC120561257
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 13084483 ~ 13094496 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804294.1
GGTCTCGCTCATAAATACTGACTTCAAGACAGCAAAGGGAACTGTATCTTCACAGGACATCCCTCCAGACCCTGAACCAGCCTTCATAACCACAGGCACAATGGCAGATGCAAGCTTTCAGCAGGAGTTCATGGAAACCCACAATGCCTACAGGCTGAAGCACAACACGCCCGAGATGACCCTTAGCAGCGAGCTGTCTGCTTCAGCTCAGAAATGGGCCGATCACCTGCTGGCAATCAACACCCTGCAACACAGTGACACTCAGGACGGAGAGAACATCTACAATATGCGTAGCTCAGCAACCCTTAAACTGACAGGGAAAGAAGCTGTAGATTCGTGGTACAGTGAGATCAAGGATTACAACTGGAGCTGCCCTGGATTCAACAGCAATACTGGTCATTTTACTCAGGTGGTGTGGAAAGACAGCAAAGAACTGGGCGTGGGCATGGCCACTGATGGCCACAAGGTATTTGTGGTTGGGCAGTACCGGCCAGCTGGCAACATGAACATGCCGGGATACTTTGAGAAAAACGTCCTACCAAAAGCGTAAAAGACAGCTGGCAGAGAGGTGGGTGGAGCAGACAAGACTTCCAGTGAGGAAGGTGCAGTGAGCCCAAGGAAAACTTCACACTGCTCCTGATCGTTGACCCCAACACACTGTTGCTAAATGTTCCATGTTGTAAAACAAAGTAAAATAcatcaaataaaacatgttattgTGCA

Function

GO: NA

KEGG:

id description
K24835 GLIPR2; glioma pathogenesis-related protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804294.1 True 723 mRNA 0.49 6 13084483 13094496

Neighbor

gene id symbol gene type direction distance location
LOC120560514 LOC107752212,LOC107675959,LOC107679452 coding downstream 23690 13059490 ~ 13060793 (-)
LOC120561259 NA coding downstream 46036 13036828 ~ 13038447 (-)
LOC120561258 NA coding downstream 52566 13025415 ~ 13031917 (-)
LOC120561256 NA coding downstream 136128 12944844 ~ 12948355 (-)
tubb2b tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 coding downstream 160778 12921169 ~ 12923705 (-)
LOC120561314 nr5a1,sf-1 coding upstream 555396 13649892 ~ 13686906 (-)
nr6a1a nr6a1 coding upstream 645857 13740353 ~ 13864440 (-)
LOC120559998 NA coding upstream 868647 13963143 ~ 13972136 (-)
htr7c htr7,LOC104934772,LOC100705941,LOC102292089 coding upstream 1012907 14107403 ~ 14142258 (-)
LOC120560956 LOC103141353,LOC103469718,LOC100701549,LOC106929229 coding upstream 1151987 14246483 ~ 14248811 (-)
G61161 NA non-coding downstream 77024 13007246 ~ 13007459 (-)
G61154 NA non-coding downstream 106454 12977752 ~ 12978029 (-)
G61151 NA non-coding downstream 109337 12974889 ~ 12975146 (-)
G61119 NA non-coding downstream 209867 12836649 ~ 12874616 (-)
G61193 NA non-coding upstream 87091 13181587 ~ 13182319 (-)
G61195 NA non-coding upstream 88094 13182590 ~ 13184478 (-)
G61205 NA non-coding upstream 182697 13277193 ~ 13277633 (-)
LOC120560090 NA non-coding upstream 232080 13326576 ~ 13327712 (-)
LOC120561378 NA non-coding upstream 292980 13387476 ~ 13390549 (-)
LOC120561038 LOC102778062,LOC101486272,LOC102199534,LOC108245630 other downstream 529198 12293707 ~ 12555285 (-)
LOC120561001 whrn,LOC102797690 other downstream 1022837 11901650 ~ 12061646 (-)
abca2 abca2 other downstream 1490823 11285385 ~ 11593660 (-)
G60715 NA other downstream 1894742 11189142 ~ 11189741 (-)
unc5db unc5d other downstream 2565516 10122152 ~ 10518967 (-)
G61264 NA other upstream 494543 13589039 ~ 13589332 (-)
si:ch73-138n13.1 LOC102794857,LOC107084631 other upstream 1233655 14328151 ~ 14364326 (-)
trnaa-agc_14 NA other upstream 1844479 14938975 ~ 14939047 (-)
trnaa-agc_15 NA other upstream 1850000 14944496 ~ 14944568 (-)
trnae-cuc_15 NA other upstream 1854263 14948759 ~ 14948830 (-)

Expression


Co-expression Network