LOC120561258


Basic Information

Item Value
gene id LOC120561258
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 13025415 ~ 13031917 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804296.1
TCCTACACATCGACGAGGAGGGAGAGGTCTCGCTCATAAATACTGACTTCAAGACAGCAAAGGGAACTGTATATGTACAGGACATCCCTCCAGACCCTGAACCAGCCTTCATAACCACAGGCACAATGGCAGATGCAAGCTTTCAGCAGGAGTTCCTGGAAACCCACAATGCCTACAGGCTGAAGCACAACACGCCCGAGATGACCCTTAGCAGCGAGCTGTCTGCTTCAGCTCAGAAATGGGCCGATCACCTGCTGGCAATCAACACCCTGCAACACAGTGACACTCAGGACGGAGAGAACATCTACAATATGTGGAGCTCAGCAACCCTTAAACTGACAGGGAAAGAAGCTGTAGATTCGTGGTACAGTGAGATCAAGGATTACAACTGGAGCTGCCCTGGATTCAGCGGCAATACTGGTCATTTTACTCAGGTGGTGTGGAAAGACAGCAAAGAACTGGGCGTGGGCATGGCCACTGATGGCCACAAGGTCTTTGTGGTTGGGCAGTACCGGCCAGCTGGCAACATGAACATGCCGGGATACTTTGAGAAAAACGTCCTCCCAAAAGCGTAAAAGACAGCTGGCAGAGAGGTGGGTGGAGCAGACAAGACTTCCAGTGAGGAAGGTGCAGTGAGCCCAAGGAAAACTTCACACTGCTCCTGATCGTTGACCCCAACACACTGTTGCTAAATGTTCCATGGGAAAaatccaaaataataaatatactgCTTGGCTGAGCATTGTTCTTACACATTACTGTTTAAATGACTTATGTTGTTGTGAATATAGCAAATATAAAAATGCATCTGCAGTATCCTGTATTTTGTGTCAATGCGATGACCTTAGTATAATTTTGCCAACCCACTCCTTTAattcttaatacatttaattttatgCCACCATTAAATATATCACATTGTATA

Function

GO: NA

KEGG:

id description
K24835 GLIPR2; glioma pathogenesis-related protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804296.1 True 925 mRNA 0.46 6 13025415 13031917

Neighbor

gene id symbol gene type direction distance location
LOC120561256 NA coding downstream 77060 12944844 ~ 12948355 (-)
tubb2b tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 coding downstream 101710 12921169 ~ 12923705 (-)
LOC120561416 entpd2 coding downstream 333069 12673697 ~ 12692346 (-)
nelfb nelfb,LOC102791926 coding downstream 356289 12652618 ~ 12669126 (-)
LOC120561146 LOC104923795 coding downstream 382259 12641855 ~ 12643156 (-)
LOC120561259 NA coding upstream 4911 13036828 ~ 13038447 (-)
LOC120560514 LOC107752212,LOC107675959,LOC107679452 coding upstream 27573 13059490 ~ 13060793 (-)
LOC120561257 NA coding upstream 52566 13084483 ~ 13094496 (-)
LOC120561314 nr5a1,sf-1 coding upstream 617975 13649892 ~ 13686906 (-)
nr6a1a nr6a1 coding upstream 708436 13740353 ~ 13864440 (-)
G61161 NA non-coding downstream 17956 13007246 ~ 13007459 (-)
G61154 NA non-coding downstream 47386 12977752 ~ 12978029 (-)
G61151 NA non-coding downstream 50269 12974889 ~ 12975146 (-)
G61119 NA non-coding downstream 150799 12836649 ~ 12874616 (-)
G61128 NA non-coding downstream 179129 12837971 ~ 12846286 (-)
G61193 NA non-coding upstream 149670 13181587 ~ 13182319 (-)
G61195 NA non-coding upstream 150673 13182590 ~ 13184478 (-)
G61205 NA non-coding upstream 245276 13277193 ~ 13277633 (-)
LOC120560090 NA non-coding upstream 294659 13326576 ~ 13327712 (-)
LOC120561378 NA non-coding upstream 355559 13387476 ~ 13390549 (-)
LOC120561038 LOC102778062,LOC101486272,LOC102199534,LOC108245630 other downstream 470130 12293707 ~ 12555285 (-)
LOC120561001 whrn,LOC102797690 other downstream 963769 11901650 ~ 12061646 (-)
abca2 abca2 other downstream 1431755 11285385 ~ 11593660 (-)
G60715 NA other downstream 1835674 11189142 ~ 11189741 (-)
unc5db unc5d other downstream 2506448 10122152 ~ 10518967 (-)
G61264 NA other upstream 557122 13589039 ~ 13589332 (-)
si:ch73-138n13.1 LOC102794857,LOC107084631 other upstream 1296234 14328151 ~ 14364326 (-)
trnaa-agc_14 NA other upstream 1907058 14938975 ~ 14939047 (-)
trnaa-agc_15 NA other upstream 1912579 14944496 ~ 14944568 (-)
trnae-cuc_15 NA other upstream 1916842 14948759 ~ 14948830 (-)

Expression


Co-expression Network