arhgap25 (arhgap25)


Basic Information

Item Value
gene id arhgap25
gene name arhgap25
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7108813 ~ 7136851 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804325.1
tccttggcttaaagaaCGTTTAAGATCCCTGTTCTGGCCTATTGTTTGTTGGCTTGGCTCCTTCAGCCCGCGGTGTTATTTATGTAGGACAATCACAGCTACATTGGTGCACCTTCCACAGGAAACTGGTCAGCTCCGACCAGCAGTTTCCTTTCAGCCTGAAACTGTTTAAGTGGGGAACAAAAATAGGCTACAGTTAGCAGGTCTCATAAACGTGATAGGCTGATGCATATTGATATCAAAAAGAGGAAGTGCTCTGTTCCAGTTAAGTAGAGCTCTGATGTTTTTGTAATGTTTCACAGCGCTGGCGGTGACACAGCACGTTGGGGATCGCTCTTAATGACACTTTTACCAACAGCTTTTTTGTGGTGTTTGGCAGCGCGATCCAGGAGTGTGATACCGGGAGAGGGAGGTCCCGGCCCGGGCTCGCCGCGCTCCTCCAGGTCCATGGAGAGGCCGCTGAAGGCCGGCTGGCTCAAGAAACAGCAGAGGTCTTTAGTCaagaactggcagcagcgttACTTTGTGCTCAGAGGAACCACTCTGACCTACTACAAAGATGACAAGGAGACCACTGTCCAGGGAGTCATCCAGCTGCGGTTCAGTAAAGTTAATGAACTCCCTCCGAACCCAGATGATCCTGGGAAGTACCTCTTCGAGATCATACCACGTCCAACTGGAGACAGAGAGCGATGTCCCTATGTGTTCATGGCAAACTCCCAGAGTGACATGGAGGAGTGGGTCCGCACTATGCGCAGGGTCATTGGAGTACCAACAAGTGGAGTGTTTGGAAAGAGTCTCATGGACACAGTAACATATGAGCAACGGTTCGGGCCTCACATGGTGCCAATCCTCGTGCAGAAGTGTGTGGAGTTCATCAAAGAGCATGGCCTGAATGAGGAGGGCATCTTTCGCCTCCCGGGTCAGGACAATGCTGTCAAACAGTTCAGAGATGCCTTTGATGCAGGAGAGAGACCCTCCTTCCCCAGTGACACAGATGTCCACACGGTGGCGTCGCTGCTCAAGCTGTACCTGCGCGAGCTTCCTGAGCCCGTGGTGCCCTGGACTCAGTACCAAGACTTCCTGGACTGCACCAACAACATGCCGGACATCAGCACCACAGAGGGTTGGGAAAAGTTGGACAAACAAATCGCCCTTCTCCCCAAAACCAACTACAACCTTCTCAGTTATGTCTGCCGGTTTTTGTTTGAGGTGCAGCTGTACTCCAAGGTGAATAAGATGAATGTGGAGAACTTAGCTACAGTGATGGGGATCAACCTGCTCAAACCTCAGATAGAAGACCCCATCACTGTGATGAAGGCAACTCCTCAGATCCAGAGGCTGATGACAGTGATGATCAGACAGCATGAGACTCTGTTTCCTCTCTCCAAAGACGTgcttccctcccctccctcaaACAAGGCCGAAAGCCAGAAGAACACGCCCCGAAGCTTCGTGGGCTGGGAGTCTGCAGAGaTGGGTGATGCATCTCTCTCTGAGTCtccagaagaggaggaggacaatGACAGTCCAGGTCCAGGCAGAGGAAACTGCAGCCCCCAAAACCTGCCTCAGGAGCCTCGCTCACCTACCACAGACTGGATAAGCCCGCGCAAACGCACTCAGACCCTGCCCACCTTCAACTGCCCCCTCACCGGGATGGCAGCCAAGGCGGAGGCCCTCAACCGCTGGAGTAACATCCAGGAGAGCGTGGAGGAGAAGAGCGGGACGCTGTCAGAGGACATTTTTAAGATCCTGGACCTCCGGAGTTCAGGTTCATTGTTCGGGGGGGCTCAGATCAGTAACAAGGATGGAGAGGATAGGTTAACAGCCCGAAGAGGAAGCGACAACACAAGTCCATCTACCGCTGGCTCTCAAAACCCTGACGGCGACTCCCAGCCTGCCCAGGCGCTGTCTCGGCAGACGAGTGTAGGGAAGCCGACAGTGAGCGCTTCGGTTCCGCAGGTGGACAGCAGGTCTGAGCCAGAGAAAGACACCCAGCGGCTGGTAGACAGTCTGCGGCAGGAGAACAAGGAGCTGAAGGCCGCCATGGCGGAGCTGCAGTCGGCTTTGGAGGCAGATCGCCACCGCGTGGCCGCTCTGGAGATCTGCCTGAGGAATGCAGAGCGCAGCCGCGACGAGGCCCAGAGACGCAATGACCAGCTGCAAAGAGACATTCAGCAGTTCCTCCCCAAAAAGCCACACGCTCCCACCTAACAGTTGTTTTCAGACTCACTGGTCTATGGATTTATGACTAGCGTTAACCTCAACAGAGCTAATTTCACATGAACTGGTTATGGAAAATACTATTGTCCTCCAGTGGGATGACACTGGATCATTTCCATCTGAGATGTTTGCTTCTCAAGATAAATTATTGGCGCATTTGTTTGTGCCTGTGAGTGTTATGTAGAGATCTAAATGGCCGTTAAAATTTCTATTCACATTAGAGACTTTACACAACACGAGTTGGTTCCTCCCTACTGCAGGAGTCATGGCACTGTATATGAACTTGATCTGGTGTGTCCATGGAAATGCAAGGCCGGACAACTTCAGCTTAGACGGAACCCTTTGTTCAACTGGACTGAATTAATGTTAATGGTGGACAGTACAAATACTATTTGTGCCATTTGCAGAGTGAATAGTCCATCATTTCATGTTTCATTTCAGTggtcaaataataaaacagcacaCATGTAAGTGTA
>XM_039804327.1
TCAGAACAAGTATGAACATGGAAGTAAAGGCAACGTGAGGGGACGCGTTTAGAAAggcctgaaaaaaaaagaagaagaagaaagattaACACACAGGAAGTAGGAAGTGTGATCTGCGATATctccagtttgtttgtgtgagtgagtgagcgtgtgtgtgtttgagtgtgtgtatatcaaattgtgtgtgtgtgcgtgtgtgtgcgcgcatgctCCGGCgtggtgtatgtgtgaaatGAAACGCTGACCTGTGTAATGAGCTAAGGACAATGTCTCTCAAACTACCTCGCAACTGGGACTTCAGCACCTTCAAGGCTGAGACAGCTCGCATAGCTTTTTTGTGGTGTTTGGCAGCGCGATCCAGGAGTGTGATACCGGGAGAGGGAGGTCCCGGCCCGGGCTCGCCGCGCTCCTCCAGGTCCATGGAGAGGCCGCTGAAGGCCGGCTGGCTCAAGAAACAGCAGAGGTCTTTAGTCaagaactggcagcagcgttACTTTGTGCTCAGAGGAACCACTCTGACCTACTACAAAGATGACAAGGAGACCACTGTCCAGGGAGTCATCCAGCTGCGGTTCAGTAAAGTTAATGAACTCCCTCCGAACCCAGATGATCCTGGGAAGTACCTCTTCGAGATCATACCACGTCCAACTGGAGACAGAGAGCGATGTCCCTATGTGTTCATGGCAAACTCCCAGAGTGACATGGAGGAGTGGGTCCGCACTATGCGCAGGGTCATTGGAGTACCAACAAGTGGAGTGTTTGGAAAGAGTCTCATGGACACAGTAACATATGAGCAACGGTTCGGGCCTCACATGGTGCCAATCCTCGTGCAGAAGTGTGTGGAGTTCATCAAAGAGCATGGCCTGAATGAGGAGGGCATCTTTCGCCTCCCGGGTCAGGACAATGCTGTCAAACAGTTCAGAGATGCCTTTGATGCAGGAGAGAGACCCTCCTTCCCCAGTGACACAGATGTCCACACGGTGGCGTCGCTGCTCAAGCTGTACCTGCGCGAGCTTCCTGAGCCCGTGGTGCCCTGGACTCAGTACCAAGACTTCCTGGACTGCACCAACAACATGCCGGACATCAGCACCACAGAGGGTTGGGAAAAGTTGGACAAACAAATCGCCCTTCTCCCCAAAACCAACTACAACCTTCTCAGTTATGTCTGCCGGTTTTTGTTTGAGGTGCAGCTGTACTCCAAGGTGAATAAGATGAATGTGGAGAACTTAGCTACAGTGATGGGGATCAACCTGCTCAAACCTCAGATAGAAGACCCCATCACTGTGATGAAGGCAACTCCTCAGATCCAGAGGCTGATGACAGTGATGATCAGACAGCATGAGACTCTGTTTCCTCTCTCCAAAGACGTgcttccctcccctccctcaaACAAGGCCGAAAGCCAGAAGAACACGCCCCGAAGCTTCGTGGGCTGGGAGTCTGCAGAGaTGGGTGATGCATCTCTCTCTGAGTCtccagaagaggaggaggacaatGACAGTCCAGGTCCAGGCAGAGGAAACTGCAGCCCCCAAAACCTGCCTCAGGAGCCTCGCTCACCTACCACAGACTGGATAAGCCCGCGCAAACGCACTCAGACCCTGCCCACCTTCAACTGCCCCCTCACCGGGATGGCAGCCAAGGCGGAGGCCCTCAACCGCTGGAGTAACATCCAGGAGAGCGTGGAGGAGAAGAGCGGGACGCTGTCAGAGGACATTTTTAAGATCCTGGACCTCCGGAGTTCAGGTTCATTGTTCGGGGGGGCTCAGATCAGTAACAAGGATGGAGAGGATAGGTTAACAGCCCGAAGAGGAAGCGACAACACAAGTCCATCTACCGCTGGCTCTCAAAACCCTGACGGCGACTCCCAGCCTGCCCAGGCGCTGTCTCGGCAGACGAGTGTAGGGAAGCCGACAGTGAGCGCTTCGGTTCCGCAGGTGGACAGCAGGTCTGAGCCAGAGAAAGACACCCAGCGGCTGGTAGACAGTCTGCGGCAGGAGAACAAGGAGCTGAAGGCCGCCATGGCGGAGCTGCAGTCGGCTTTGGAGGCAGATCGCCACCGCGTGGCCGCTCTGGAGATCTGCCTGAGGAATGCAGAGCGCAGCCGCGACGAGGCCCAGAGACGCAATGACCAGCTGCAAAGAGACATTCAGCAGTTCCTCCCCAAAAAGCCACACGCTCCCACCTAACAGTTGTTTTCAGACTCACTGGTCTATGGATTTATGACTAGCGTTAACCTCAACAGAGCTAATTTCACATGAACTGGTTATGGAAAATACTATTGTCCTCCAGTGGGATGACACTGGATCATTTCCATCTGAGATGTTTGCTTCTCAAGATAAATTATTGGCGCATTTGTTTGTGCCTGTGAGTGTTATGTAGAGATCTAAATGGCCGTTAAAATTTCTATTCACATTAGAGACTTTACACAACACGAGTTGGTTCCTCCCTACTGCAGGAGTCATGGCACTGTATATGAACTTGATCTGGTGTGTCCATGGAAATGCAAGGCCGGACAACTTCAGCTTAGACGGAACCCTTTGTTCAACTGGACTGAATTAATGTTAATGGTGGACAGTACAAATACTATTTGTGCCATTTGCAGAGTGAATAGTCCATCATTTCATGTTTCATTTCAGTggtcaaataataaaacagcacaCATGTAAGTGTA
>XM_039804328.1
TCAGAACAAGTATGAACATGGAAGTAAAGGCAACGTGAGGGGACGCGTTTAGAAAggcctgaaaaaaaaagaagaagaagaaagattaACACACAGGAAGTAGGAAGTGTGATCTGCGATATctccagtttgtttgtgtgagtgagtgagcgtgtgtgtgtttgagtgtgtgtatatcaaattgtgtgtgtgtgcgtgtgtgtgcgcgcatgctCCGGCgtggtgtatgtgtgaaatGAAACGCTGACCTGTGTAATGAGCTAAGGACAATGTCTCTCAAACTACCTCGCAACTGGGACTTCAGCACCTTCAAGGCTGAGACAGCTCGCATAGCGCGATCCAGGAGTGTGATACCGGGAGAGGGAGGTCCCGGCCCGGGCTCGCCGCGCTCCTCCAGGTCCATGGAGAGGCCGCTGAAGGCCGGCTGGCTCAAGAAACAGCAGAGGTCTTTAGTCaagaactggcagcagcgttACTTTGTGCTCAGAGGAACCACTCTGACCTACTACAAAGATGACAAGGAGACCACTGTCCAGGGAGTCATCCAGCTGCGGTTCAGTAAAGTTAATGAACTCCCTCCGAACCCAGATGATCCTGGGAAGTACCTCTTCGAGATCATACCACGTCCAACTGGAGACAGAGAGCGATGTCCCTATGTGTTCATGGCAAACTCCCAGAGTGACATGGAGGAGTGGGTCCGCACTATGCGCAGGGTCATTGGAGTACCAACAAGTGGAGTGTTTGGAAAGAGTCTCATGGACACAGTAACATATGAGCAACGGTTCGGGCCTCACATGGTGCCAATCCTCGTGCAGAAGTGTGTGGAGTTCATCAAAGAGCATGGCCTGAATGAGGAGGGCATCTTTCGCCTCCCGGGTCAGGACAATGCTGTCAAACAGTTCAGAGATGCCTTTGATGCAGGAGAGAGACCCTCCTTCCCCAGTGACACAGATGTCCACACGGTGGCGTCGCTGCTCAAGCTGTACCTGCGCGAGCTTCCTGAGCCCGTGGTGCCCTGGACTCAGTACCAAGACTTCCTGGACTGCACCAACAACATGCCGGACATCAGCACCACAGAGGGTTGGGAAAAGTTGGACAAACAAATCGCCCTTCTCCCCAAAACCAACTACAACCTTCTCAGTTATGTCTGCCGGTTTTTGTTTGAGGTGCAGCTGTACTCCAAGGTGAATAAGATGAATGTGGAGAACTTAGCTACAGTGATGGGGATCAACCTGCTCAAACCTCAGATAGAAGACCCCATCACTGTGATGAAGGCAACTCCTCAGATCCAGAGGCTGATGACAGTGATGATCAGACAGCATGAGACTCTGTTTCCTCTCTCCAAAGACGTgcttccctcccctccctcaaACAAGGCCGAAAGCCAGAAGAACACGCCCCGAAGCTTCGTGGGCTGGGAGTCTGCAGAGaTGGGTGATGCATCTCTCTCTGAGTCtccagaagaggaggaggacaatGACAGTCCAGGTCCAGGCAGAGGAAACTGCAGCCCCCAAAACCTGCCTCAGGAGCCTCGCTCACCTACCACAGACTGGATAAGCCCGCGCAAACGCACTCAGACCCTGCCCACCTTCAACTGCCCCCTCACCGGGATGGCAGCCAAGGCGGAGGCCCTCAACCGCTGGAGTAACATCCAGGAGAGCGTGGAGGAGAAGAGCGGGACGCTGTCAGAGGACATTTTTAAGATCCTGGACCTCCGGAGTTCAGGTTCATTGTTCGGGGGGGCTCAGATCAGTAACAAGGATGGAGAGGATAGGTTAACAGCCCGAAGAGGAAGCGACAACACAAGTCCATCTACCGCTGGCTCTCAAAACCCTGACGGCGACTCCCAGCCTGCCCAGGCGCTGTCTCGGCAGACGAGTGTAGGGAAGCCGACAGTGAGCGCTTCGGTTCCGCAGGTGGACAGCAGGTCTGAGCCAGAGAAAGACACCCAGCGGCTGGTAGACAGTCTGCGGCAGGAGAACAAGGAGCTGAAGGCCGCCATGGCGGAGCTGCAGTCGGCTTTGGAGGCAGATCGCCACCGCGTGGCCGCTCTGGAGATCTGCCTGAGGAATGCAGAGCGCAGCCGCGACGAGGCCCAGAGACGCAATGACCAGCTGCAAAGAGACATTCAGCAGTTCCTCCCCAAAAAGCCACACGCTCCCACCTAA

Function

symbol description
arhgap25 Predicted to enable GTPase activator activity. Predicted to be involved in several processes, including activation of GTPase activity; negative regulation of small GTPase mediated signal transduction; and phagocytosis, engulfment. Predicted to act upstream of or within signal transduction. Predicted to be active in phagocytic cup. Orthologous to human ARHGAP25 (Rho GTPase activating protein 25).

NR:

description
PREDICTED: rho GTPase-activating protein 25

GO: NA

KEGG:

id description
K20642 ARHGAP22_24_25; Rho GTPase-activating protein 22/24/25

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804325.1 True 2702 mRNA 0.52 10 7113668 7136851
XM_039804327.1 False 2677 mRNA 0.52 11 7108813 7136851
XM_039804328.1 False 2171 mRNA 0.55 11 7108813 7136366

Neighbor

gene id symbol gene type direction distance location
cds2 LOC104924982,LOC103361071,LOC106535345,LOC107098564,LOC105938002 coding upstream 6919 7075326 ~ 7101894 (+)
mxd1 mxd1,LOC106535940,LOC102787379 coding upstream 81926 7008164 ~ 7026887 (+)
snrnp27 snrnp27,LOC102787093 coding upstream 101554 6997153 ~ 7007259 (+)
figla figla coding upstream 140717 6951936 ~ 6968096 (+)
npffr1l2 LOC104924995 coding upstream 254409 6829697 ~ 6854404 (+)
bmp10 bmp10,LOC101468345 coding downstream 3346 7140197 ~ 7143020 (+)
rchy1 rchy1 coding downstream 375188 7512039 ~ 7519772 (+)
LOC120560565 LOC103361063,LOC101470473,LOC101159109,LOC100710325,LOC108235010,LOC107393511 coding downstream 413763 7550614 ~ 7572968 (+)
si:ch211-12e13.1 NA coding downstream 439384 7576235 ~ 7597214 (+)
LOC120560421 p2rx4,LOC102791813 coding downstream 495841 7632692 ~ 7639409 (+)
G59694 NA non-coding upstream 1959 7082014 ~ 7106854 (+)
G59687 NA non-coding upstream 79504 7027298 ~ 7029309 (+)
G59627 NA non-coding upstream 293307 6815248 ~ 6815506 (+)
G59543 NA non-coding upstream 367524 6741041 ~ 6741289 (+)
G59544 NA non-coding upstream 367885 6740664 ~ 6740928 (+)
G59696 NA non-coding downstream 42642 7179493 ~ 7263343 (+)
G59803 NA non-coding downstream 357037 7493888 ~ 7494204 (+)
G59804 tia1,LOC104967008 non-coding downstream 361638 7498489 ~ 7504014 (+)
G59833 NA non-coding downstream 450944 7587795 ~ 7588630 (+)
G59826 NA non-coding downstream 493655 7630506 ~ 7631241 (+)
zgc:65851 LOC103361079,LOC101467048,LOC102210174 other upstream 58041 7009646 ~ 7050772 (+)
add2 LOC102210956,LOC102786375 other upstream 111957 6969119 ~ 6996856 (+)
kat6a kat6a,LOC102311194,LOC106937639,LOC106932925 other upstream 389929 6674864 ~ 6718884 (+)
G59347 NA other upstream 1611059 5495155 ~ 5497754 (+)
golga3 golga3,LOC102797501 other upstream 1639603 5448061 ~ 5469210 (+)
LOC120560567 ier3ip1,yee9,LOC103361062,LOC100710589,LOC107393509,LOC105014506,LOC103152384 other downstream 437874 7574725 ~ 7576136 (+)
susd1 susd1 other downstream 463241 7600092 ~ 7623715 (+)
zbtb26 LOC104940087,LOC100710858,LOC102306976,LOC102206222,LOC101473380,LOC102792103 other downstream 488885 7625736 ~ 7630180 (+)
atp2a2a atp2a2,LOC102794349,LOC101476777,LOC102310403 other downstream 710820 7847671 ~ 7878371 (+)
cux2b cux2,LOC102795992 other downstream 810401 7947252 ~ 8051340 (+)

Expression


Co-expression Network