unm_hu7912 (LOC102295462,LOC101483439,LOC103375604,LOC100694328)


Basic Information

Item Value
gene id unm_hu7912
gene name LOC102295462,LOC101483439,LOC103375604,LOC100694328
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 367381 ~ 376915 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804336.1
CCAGAGGCACGCGCACAAGCGCAGGCTCAGACACACCTCCTCCTTCccctccatcacacacacacacaaacacacaagagagCATCGCCGGGTGAAGTAGACAACATGTAAAGGCAGCGGGAAGGACAAGCGCTCGGCTCCGGCAGGCTCGCGGCAGGTGCGGTAGGCTACGGCCGAAGCTGCACGGTCTCGCGGAGGACGGGCTGCCTTTTCACCATGCCCCCCGCATCCCGACTACTCTCTGGCGAGACGGCTGTGGTGATCTTGAATCACACTGAATGGAGAGCATCGAAAGTTCATTAAGATGACACGAACACACCCCCCTGATATACTGGCATCAACTCTATTTCGGGACTTCACTCTAAATCCCATCCCTGACCCCTCCATTTCTCTCCACTCCTCCCGGCAATGTGACTTGAAAATGATTGACAAACCGGAAATCATCAACAAAAGACACTGCCGTAGCTTTGACTTCATTGAGTCCCTGGACGACCCGCAGTCCCTCGCTTCCTCAATGGAGTACCCTTACAAGAGGGCCGAGCATCAGACATTAAACAAAGATCCAATGTGGAATGGACTAGATCAACCGGGGCACCTTCGCTTTTCTTCTCCCGATCTGTTCAACACCAGGCTCTTCCAGCAGCACACCACCCAGGACAAAACCAGCCACCTTACGTGGTCAGACTCTAAAAAGAGAACACGATCTAGAAGCGCTCCGAGAATTAAGTCCACCCTCACTCCTGTGCCCATCTCCGTGTCTCCCCCAGGAgcccggaaggggagggacgcGCCTCAGGTCGCGTCAGATACCTTGAGGACTTCCGAAACAAACCGAGAACCCTACTCCTCCTCAAACAGGGCTTTTTTAAATGAGGTGCATCCCATCAAACTGCAGCCTCAGTCTCCCCTCTACGTTTCAGACTGTTTCGAGGAGGATAAACCGGATAAACCAGCCCTAACCCCTCATGTCAGGTGCCGTGTGGACATTAAACCAGATGCTGCTGTACTGCAGCACACATCTCGGCAGATTCCCAATGTACGGCCTGAGCATCTTTGGCAGAGATACTCCCAGGCCAGTAGCAGTAGGGGTTTGTATGTACCTCGGCAGATTGCCTCCTCACCAACGCCCACTCCGAGCGAATGCTACAGTGGAGATTTTAGACAAGGATATCACTATACCACCAGCATGTCTCCCATCTCATACCAGCATCTTGACATGCACAGAATGCCGTCACCGACAGCACCATATCTGAGTCAGGAACAAAGAGCTTACTCAAATCCTAACATACCAACCAAGTTTTTCTATACAGAGGACCCTGTTCGGTATCCAGTCCATCCCTACTCTAGAGCATACTTTCAGGACGACCGGTCCAGTCTGACCAGCCATGGTAGTACAATGACTAGTCAGTATGATCCAAGGACTCGATGGGTGCACACACTTCCTGTCAGGCCGTATTACACCGAAAATCTTTCCAACAGAGAGCCAGCACACTCTGTATATAGTAGGCCTTACTCCACCAGTGAGGCAGGATCATACTTTTCTCAAAGCCCACTGTCTAGATCTTTCTATGGAGAGGACAGCCGGTTCAATCCATACCATATGAGTAACCCaaagttgttttattccaaaccaTGCTCTCCTGAGGAGCAGTACTTTCCACCAAGGCCATACCATACGGAGGGTCGCCGACGCCCTCGAATGTCGCAGGCCTTATCAGATGACTGGTATCGCTCGAGTATATCTGGTTACTCTAACCAGTCCTCCCAGCACACACCACTGAGAGTAAGGCAAGACCCCAGTATACCCCCGTGGTTTACTAACAGCTGTGTGGAGACAAGTAGACTAGGTGCAGAGGTCAGAAACCACTCCAAGTCTTGGGACAATATTCTATATCCGCGGCAGGACAGAGAGCAATCTGTGCCTCGTGGCCGGAGCTATGAGAACCTGTTTCACCAAGCAAAGCAAGCAGCATCGTCTGAAGTTACATCTCAACCTGTTATCCTTAACCTGTCGAGTTCACCGAGGCGCTACGCCGCCCTTTCGCTCTCTGAAAGCTCATTAGAGAGGGGCTCAAGCAATCCGTGGAGGAATACCAAGAGCGGGCACTGGTTTGTAACTCCTGAGATCACCATAACAGATAACGACATATGTGCAGGCAACAGAAAGCGGCGCGACGTGCACTCTGTCAGCTGGGATACGTTGGACGAGGAAAAGACACCGTCTCCCAGAGTAATGCATCACAAGCAGCCACAAAATACACCGGACATTACCAAAGAGAGGAAACACAACAACTTCTCCCTCCAGCAGAGTCTCGAGCAACTGGATGAGCTCTTAGCTGATTTGGTTATTGATTACAAACCACCCACTAGCAGAAAGTCAAGCGTAGACATTTTAGACCAGCTGAAACAACTCATTACCGAAGATGACGACAAAGACCGAGGATCTTCTGGGCTTGAAAACGTAGGATGTCTGAACTCACAGCTCCCGTCCTCTAAATCCAGCCCAGACACAATCAAAGACCCTGACAGTGGGTTCGACGCTTTACAAAGGAGTGCAGAAGAATGTTCTCCAGACCACAGCACCGACGACGACGACACTATGGTGTGCTCCAACAAGAAGTGCAACCGGATCGAGAGCATGTTCAACGCCTGCTTGTACTTCAAATCATGCCACAGTTGCTACACGTTCTACTGCTCGCGAAACTGTCGCAGGGATGACTGGGAGATCCACAAAGACACCTGTCTGTACGGCCGCGTGAACAGCGTGTGTCGACACGCTCTAAAGTTCTGCAGAGAGAATTCAGAGATCCACAAAGCCTTCTCTCGCGTCGCTAAAGCTGGCTTCCTCTCCAGAGGGAGAGGCGTTCTCTTTCTGGGTTTTGCTAATCCGGAGACAGCCGACAACTTCCTCCAAGTTGGGCTGGAGAGCCTCCTCATGTCTCCCACATACCTATCTCTCAGAGAGCTGGACGGCTTCAGGGACAACCTCGGTGAATACTGCAAGGAACTACAGCACGCAGGTAACGAGTACGACCCCAACGAATGTTTCCTTCTGAATGTATCTGTGGCTGTCGGTGAACTAGTGCCTAACAGACCTTCACCAAGGGTCCAAGCACCAACAGTTCGAAAATATGCAAAGGTATCCTTGGCCTCCTCAAGCCCTGACAAAAAGGTACTCAGGAAGGACAGCGAAATGGAAACCCTCATACTCACTCCGCCTCCAGGCACACCGGACATTGacaaggagggggaggagggaaggaaggccAGAGAGGTGTGCTTCGTCAATATCCAGCGCGAGCTCAGGACCAGGGGAGTCTTCCTACGTCACGAGTACCCCAGAATCTATAATCAGCTGTGTGGGTTTGTGGAGAGCAACAAAGGGTTCACGCCAACTACAATTTACCCAATAGATAAGAGAACAGGGAAACAGTTCATGTGCATGATCATGGCTGCATCCGAGCCAAGGACACTGGACTGGGTGGGTACCCCTCATCTCTTGGATGATATAATATAGTAGGCTACAGCACTAAATGATAATGATGTCAGCAACActaaatgtacatactgtaaatacatgGCGTGGTTTAGCAAATTGAGCGTTGATATGGAactgtgtgtatactgtatgtgaccaatctctctttctgtctctctcctcttctttctctctgtcgcCACAAACACAATGTCACTCGAGCGCGTGcgcacacaaacaacacacacaca

Function

NR:

description
PREDICTED: uncharacterized protein C9orf172 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804336.1 True 3729 mRNA 0.51 2 367381 376915

Neighbor

gene id symbol gene type direction distance location
syn1 syn1,LOC102209911 coding upstream 11028 340977 ~ 356353 (+)
LOC120561159 rasal1 coding upstream 123187 223141 ~ 244194 (+)
LOC120560800 NA coding upstream 150882 213036 ~ 216499 (+)
ccdc157 ccdc157 coding upstream 180037 183677 ~ 187344 (+)
LOC120560558 brd3,LOC101484219,LOC107386174,LOC101063386,LOC103397963 coding upstream 267877 79632 ~ 99504 (+)
gapvd1 gapvd1,LOC102777314 coding downstream 4257 381172 ~ 432629 (+)
pbx3b pbx3 coding downstream 155898 532813 ~ 593805 (+)
mvb12bb LOC104950954 coding downstream 355782 732697 ~ 773213 (+)
zbtb34 zbtb34,LOC100694860,LOC102780544,LOC102300203 coding downstream 493116 870031 ~ 877817 (+)
adamts13 adamts13 coding downstream 652342 1029257 ~ 1052283 (+)
G58024 dtx1,LOC106585516,LOC106579922 non-coding upstream 107684 257568 ~ 259697 (+)
G58021 dtx1 non-coding upstream 115309 245891 ~ 252072 (+)
G58011 NA non-coding upstream 156705 209281 ~ 210676 (+)
G57994 NA non-coding upstream 241118 121847 ~ 126263 (+)
LOC120560560 NA non-coding upstream 257320 108566 ~ 110061 (+)
G58057 NA non-coding downstream 164975 541890 ~ 572532 (+)
G58151 NA non-coding downstream 502339 879254 ~ 882251 (+)
G58156 NA non-coding downstream 515182 892097 ~ 892439 (+)
G58157 NA non-coding downstream 521978 898893 ~ 899506 (+)
G58209 crat,LOC107393635,LOC102215149,LOC101477431 non-coding downstream 676100 1053015 ~ 1053413 (+)
LOC120560799 NA other upstream 154998 210742 ~ 212383 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other downstream 412490 789405 ~ 837861 (+)
dock5 dock5 other downstream 1896763 2273678 ~ 2312665 (+)
lman2lb NA other downstream 2501459 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 3058250 3435165 ~ 3522756 (+)
G59086 NA other downstream 3740364 4117279 ~ 4117631 (+)

Expression


Co-expression Network