acaa2 (acaa2)


Basic Information

Item Value
gene id acaa2
gene name acaa2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 26499573 ~ 26505004 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804369.1
ACTGTACTGCGTTCTCTCTCATCCATTATATTTAGGAGAAAGGTCGCAGTAATCAGGTCTATAATCATCACGGACAGATTCAGAGTGCCACAAGAAGACATCGGCCCAAGAGTTTGATCCTGCTGGTTTGTTGATTCTGCATTATGGCGCTTCTCAGAGGTGTATTTGTTGTAGCTGCCAAGCGCACTCCGTTTGGTACCTATGGTGGCGTGCTGAAGGATCACAGTGCAACAGACTTGGCTGAGCATGCAGCCAAAGCCGCCCTTGCTGCAGGGAGCATTGCACCAGAACTTATAAACAGTGTCATCATGGGAAATGTCATGCAGAGCTCAGCTGATGCACCCTACATTGCTCGTCATGTGGGTTTGAGGTGTGGTGTTCCCATCCCAGTGCCTGCTCTTACTGTGAACAGACTGTGTGGATCTGGCTTCCAGTCCATCATCAATGGCGCTCAAGAGATTTGCCTTAGGGAGTCAGAGGTGGTCCTGTGTGGAGGCTCAGAGAGCATGAGCCAGGCTCCATATGCTGTTCGCAACATACGATTTGGTACAAAGTTTGGAGTCGATCTCaagCTAGAGGACACCTTGTGGGCGGGTCTGACTGACCTGCATGTCAAAATCCCAATGGGCATCACAGCAGAAAACCTGGCAGAGAAATACCAGATCACACGAGAAGAAGTTGACAACTATGCATACCAGACGCAACAAAAGTGGAAGGCCGCTCATGAGGCTGGTTACTATACAGCCGAAATTGCTCCCATTGATGTGAAAGCTAGAAAAGGCAAGGTGTCCATGGCTCAGGATGAACACCCTCGTCCACAGACAACACTAGAACAGTTAGCCAAACTGCCTCCTGTCTTCAAGAAGGGAGGGACTGTTACTGCTGCCAATGCTTCAGGTGTATCTGAtggtgctgcctgtgtggtGATTGCGAGTGAAGATGCGCTGAATGAACACAAGCTCACTCCACTGGCTAGAATTGTGGCCTATCATGTGTCAGGCTGTGACCCGAGCATTATGGGAATTGGTCCCGTTCCAGCAATCACAGGAGCTCTTAAAAAAGCCGGACTGACTCTCAACGACATGGATCTTGTGGAGGTGAACGAGGCTTTTGGTGCTCAATACCTGGCTGTTGCTAAGTCTCTTGGACTGGATCCAGCGAAAAGCAACGTTAACGGTGGAGCTATTGCCATCGGACATCCTCTCGGTGCTTCTGGAGCACGTATCACTGCCCACCTGGTTCATGAGCTCAGGCGACGAGGAGGCAAGTATGCTGTTGGCTCTGCCTGCATTGGTGGTGGTCAGGGCATCGCTATCATCCTTGAAAAGTACTGACCAAAATAGGTGCCAATATCAGAGGAATTCCTGTAGAAGAATGTCTTGTCCCACCATCTACTCGCATAAAATAAAACTCAGGTCATACATGCTAAAAAGAGATTTCCTTCACGTACAGATCAATGGCAAATCTTATCTTAACGTGAGGTACTGCTGGTCTGTTTTTCCCTGGCACACAAAGAaaactcaacattcattttttttgctgtaaCTCTAACTTCTTTCagcctatataaaaaaaaaaatggacaacAAATGTTTCAGTCCAGTTTTGCCTTGGAAGCCATGTGAAGATAAAGAGCTAACTCATGTTTCTGTGGTCGTTGCACCAGACTGTTTATGGATGTGCCTGAGACGCATAGCTAGTTCCTTGGTCTCATTAACTTGTGTAGCATAGCATTAACTCATAAAGTACAGTTTGTGTTGGGTTATAGTAAGGTTTAATGGAACTCTGAACTAAAAATGTTGCCATTAAAATGTTGTCTATCAGTCCATTATCAGGAATCATTTGTCTGACCTGTGATGGCTCCAGCAAAAGTTGTAATTCTGTGTCAAAGAAtctcaataaatacattttccaaaAA

Function

symbol description
acaa2 Predicted to enable acetyl-CoA C-acetyltransferase activity. Acts upstream of or within lymph vessel development and regulation of fatty acid beta-oxidation. Predicted to be active in mitochondrion. Orthologous to human ACAA2 (acetyl-CoA acyltransferase 2).

NR:

description
PREDICTED: 3-ketoacyl-CoA thiolase, mitochondrial-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups molecular_function

KEGG:

id description
K07508 ACAA2; acetyl-CoA acyltransferase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804369.1 True 1918 mRNA 0.46 10 26499573 26505004

Neighbor

gene id symbol gene type direction distance location
ufd1l ufd1l coding upstream 6009 26489321 ~ 26493564 (+)
dhx37 dhx37 coding upstream 11172 26476188 ~ 26488401 (+)
gp1bb gp1bb,LOC102779926 coding upstream 24255 26472774 ~ 26475318 (+)
sept5a sept5,LOC102226618 coding upstream 28871 26459626 ~ 26470702 (+)
zgc:63587 LOC101064433 coding upstream 52060 26415890 ~ 26447513 (+)
rpl6 rpl6 coding downstream 1641 26506645 ~ 26511245 (+)
vdac3 vdac3 coding downstream 38022 26543026 ~ 26553731 (+)
plat plat coding downstream 80776 26585780 ~ 26597313 (+)
si:dkeyp-117b11.1 NA coding downstream 92991 26597995 ~ 26607634 (+)
si:dkey-178e17.3 sbspon,LOC103359527 coding downstream 161729 26666733 ~ 26679998 (+)
G64764 NA non-coding upstream 177617 26303850 ~ 26321956 (+)
G64677 NA non-coding upstream 570415 25928924 ~ 25929158 (+)
G64663 NA non-coding upstream 577185 25922163 ~ 25922388 (+)
G64658 NA non-coding upstream 581480 25917765 ~ 25918093 (+)
G64657 NA non-coding upstream 582097 25917187 ~ 25917476 (+)
G64834 NA non-coding downstream 7461 26512465 ~ 26514759 (+)
G64836 polb non-coding downstream 26748 26531752 ~ 26533420 (+)
G64838 polb non-coding downstream 30008 26535012 ~ 26537695 (+)
G64839 NA non-coding downstream 33264 26538268 ~ 26538541 (+)
G64840 NA non-coding downstream 33654 26538658 ~ 26540223 (+)
c6h22orf39 clg12h22orf39 other upstream 2586 26494284 ~ 26496987 (+)
G64814 cldn5,LOC103357131 other upstream 84976 26412869 ~ 26414597 (+)
nsd3 whsc1l1 other upstream 115730 26359120 ~ 26383843 (+)
LOC120560359 NA other upstream 570977 25926087 ~ 25928596 (+)
LOC120560031 LOC104941040,LOC103357154,LOC102795853 other upstream 583996 25914279 ~ 25915577 (+)
cltcl1 LOC100691387,LOC103359525 other downstream 109233 26614237 ~ 26644167 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other downstream 139657 26644661 ~ 26661895 (+)
ndufs4 ndufs4 other downstream 507206 27012210 ~ 27039599 (+)
G65084 lipg other downstream 700230 27205234 ~ 27370959 (+)
mboat4 NA other downstream 2340622 28845626 ~ 28849471 (+)

Expression


Co-expression Network