sept5a (sept5,LOC102226618)


Basic Information

Item Value
gene id sept5a
gene name sept5,LOC102226618
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 26459626 ~ 26470702 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804406.1
TTTCCCTCCCTCTCAGTGAGAATTCCTCCGTACCTGTCTGAACAGGGAGAGTCGGACCGCTGTAGggcagaggaaagaaagaaatagaaagaaaagaaagggaaTCAGGAGAAAGAAAGTAGGAGAAACAAAAGGCACATATTTAAAGAGCACGGAATAGAGGTGTGTTAGAGACAGTTTTGGAACGGACACAGAGCGAGAGACGAGTTTATCAAGGTCTCGAGGCTTCACATTTGCTTTTTTCCCTGCTCCCTGCTGGGctgtttttcaactttctgagaCCCGTGGCTATTTTGGTCCGTCAGTGTCGGAGTGGTTTGGGATGGATGCCATCATGCTGCAAGAAAAACTGGTGGAACGGCTGCTGTGCCCACGAGTGAGAACAGCCAGGCAGAAGGAGAAACAGTATGTGGGTTTTGCAACTCTGCCCAACCAGGTCCACAGGAAGTCGGTGAAGAAAGGCTTCGATTTCACACTGATGGTGGCAGgaGAGTCTGGTATGGGTAAATCCACCCTGGTCAACAGCCTGTTCCTCACAGACCTCTACAAAGACAGGAAGTTACTGAATGCTGAAGAGCGTATCAACCAAACTGTGGAGATCATAAAACACACTGTAGACATTGAGGAGAAAGGAGTCAAGCTCAAGCTGACCATCGTCGACACGCCGGGGTTCGGAGACGCAGTCAACAACAACGAtctttggtCGCCAATCACAGACTACATAGATCAGCAGTTTGAGCAATACTTCAGGGATGAGAGCGGGCTGAACAGAAAAAACATTCAGGACAACCGAGTCCACTGCTGCCTTTACTTCATCCCTCCATTTGGGCACggGCTGCGTCCTGTGGATGTTGAGTTCATGAAGGCTCTGCATGAAAAAGTGAACATAATTCCTCTCATTGCAAAAGCCGACTGCCTCACGCCCAACGAGATAAAAAAGCTCAAAGACAGAATACGAGAGGAAATAGACAAGTTTGGGATCAAAGTATACCAGTTCCCCGAATGTGACTCAGATGAGGATGAAGAGTTTAAACAACTTGACAAAGAGCTGAAGGAGTGCACCCCGTTCGCTGTGATCGGTAGTAACACAGTGGTGGAAGCTCGAGGgcagagagtgagagggagacTGTACCCCTGGGGAATTGTTGAAGTGGAGAACCAGTCGCACTGTGACTTTGTGAAACTGAGGAACATGCTGATTCGTTCACACATGCACGACCTCAAAGACGTGACCTGCGACGTCCACTACGAAAACTACAGAGCGCAGTGCATACAGGAGATGACCAGTAAACTGGCTCAGGACAACCGTATGGAGAGTCCCATACCCATCCTGCCGCTGTCCACCCCGGATGCGGAGACTGAGAAACTAATCAAAATGAAAGATGAAGAGCTGAAGAGGATGCAGGAGATGCTGAATAAGATGCAGCAGCAGATGCACGACAAAGACTAGTCTCACCGGAGCAGAGCTGGGCTgcagcgccacctgctgtttcTCCCCTGACCGACAGTGAGACCTTCAGACATTGAACATGGATATCGCGTGTTAGTGGCAACTCTGGCTGTACATTTATCCTCAGTTTGGTGCTTTGTATAGTTTGTCTGCCTGGACGGTTGTTTgtcagagcatttttttttgtctctgaaACCATCTGTTTGCCCAATTTGAGCCCCTCGCTGTGGTTTAACAGTCttaacatatataatataaatgcgTAATTTAAATTACTACTCAGTGTGTCTAATTTATAAATGCAATGCTAAACTTTTTGGATATTTTGTCAGGGTATGATGTGTACAAGATGTTTTGTAAAGAAATTTAGTTTGTTGGTAATGTTAAGATTTGATggatattgttttttattatgtgtTTGTGAGTTTGTGTTTGGGTGCGTGAGTGTTTGTATTTCATGACATTTCCTCCAGGTATCCGTCCATAAAACTCCATTTTATTCACAGTGACTATCCTTTTTTTAATCCAACTTTTGCTCTTATTAATTTGCTCTCTGATTGTCATAAATACCTTCATGTGACATTTTTTCCACATATGGCAAGTCAAAATATTCTCTCCCAGCAGTTTTATATGTGCTGGCTGAGCTGAAAATGCACTTATTGCCAGTGGTTAACTGTGAATGGCGATCCTTTGACATAATGTGAGGGTCAGTGCGTGCAGGGTGCATGTACAGGCATGCTGCCATTACTCATATACGCTAAATGCTGTGGGCCTATTTTTACTCCTTTATAGCCGATGCCCTCTGCTTGTATTAAATGCATCATGATCTACAGTATGTTGCCGCTGCGgtaaaaatagataaataatgaGGAGTGGATACTGTGTCCATGCTTCGGTTTTAAATGTCTCTTTGgaagtgaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgctgaggaACGTACTTATTCTGCCTGAAAGCTGAGCTCAGCCTGTGCCCCATTTATAAAAGTGTGACAAATAAACTCTTATTTCTCGTC

Function

symbol description
sept5 septin 5

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K04557 SEPT5, PNUTL1, CDCREL1; septin 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804406.1 True 2614 mRNA 0.45 12 26459626 26470702

Neighbor

gene id symbol gene type direction distance location
zgc:63587 LOC101064433 coding upstream 12113 26415890 ~ 26447513 (+)
cdc45 cdc45 coding upstream 56965 26395798 ~ 26402661 (+)
plpp5 plpp5,LOC102777825 coding upstream 65225 26384409 ~ 26394401 (+)
sprn2 NA coding upstream 130698 26324749 ~ 26328928 (+)
LOC120561147 rassf2 coding upstream 151998 26295751 ~ 26307628 (+)
gp1bb gp1bb,LOC102779926 coding downstream 2072 26472774 ~ 26475318 (+)
dhx37 dhx37 coding downstream 5486 26476188 ~ 26488401 (+)
ufd1l ufd1l coding downstream 18619 26489321 ~ 26493564 (+)
acaa2 acaa2 coding downstream 28871 26499573 ~ 26505004 (+)
rpl6 rpl6 coding downstream 35943 26506645 ~ 26511245 (+)
G64764 NA non-coding upstream 137670 26303850 ~ 26321956 (+)
G64677 NA non-coding upstream 530468 25928924 ~ 25929158 (+)
G64663 NA non-coding upstream 537238 25922163 ~ 25922388 (+)
G64658 NA non-coding upstream 541533 25917765 ~ 25918093 (+)
G64657 NA non-coding upstream 542150 25917187 ~ 25917476 (+)
G64834 NA non-coding downstream 41763 26512465 ~ 26514759 (+)
G64836 polb non-coding downstream 61050 26531752 ~ 26533420 (+)
G64838 polb non-coding downstream 64310 26535012 ~ 26537695 (+)
G64839 NA non-coding downstream 67566 26538268 ~ 26538541 (+)
G64840 NA non-coding downstream 67956 26538658 ~ 26540223 (+)
G64814 cldn5,LOC103357131 other upstream 45029 26412869 ~ 26414597 (+)
nsd3 whsc1l1 other upstream 75783 26359120 ~ 26383843 (+)
LOC120560359 NA other upstream 531030 25926087 ~ 25928596 (+)
LOC120560031 LOC104941040,LOC103357154,LOC102795853 other upstream 544049 25914279 ~ 25915577 (+)
LOC120561182 LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747 other upstream 763050 25684964 ~ 25696576 (+)
c6h22orf39 clg12h22orf39 other downstream 23582 26494284 ~ 26496987 (+)
cltcl1 LOC100691387,LOC103359525 other downstream 143535 26614237 ~ 26644167 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other downstream 173959 26644661 ~ 26661895 (+)
ndufs4 ndufs4 other downstream 541508 27012210 ~ 27039599 (+)
G65084 lipg other downstream 734532 27205234 ~ 27370959 (+)

Expression


Co-expression Network