LOC120561362


Basic Information

Item Value
gene id LOC120561362
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 3272451 ~ 3293307 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804453.1
GCCGAGCATGCGCAGAGTGTCGCAGCTAACCACATCAGAAACCAATCCATAAACGTGTTTACGgaatttaaattaaacaacAGCGAGAGTTTTCAAGGAAAGAGAAGCTTCCTGTGAAGAGTACAGgGATGAAGTTCCCTGTGGATCTCCTGGCTGATGTTAGCCACACAGAACTGGAGCGGCTGGCCCACACCTACATGAACAACCTTCTTTACAGCAACCCGGATGCTCCTGAACACCTCACCCTCCCTGACTCCACCCAGGTCACCATCAACATTTGCAGTGTGGGCTTCGTCCCTCTGTATGGATCCAGTGATAAGCAGAAGGTCCTGGCCCTCTTCTCTCCCACTGAGCCGCTAACTGCTGTGGCTCTGTACCTGCTGGACCAGTGGTGGCCCGTGGATGACATCCTCAAGACAGCAGACCCTGCTCGGGATGGAGCGGTGGAGgtgGAGACAGTAGGAGAGAGAATAGTTCTGTACATCCTTAACCGTGTGGTCTATAGAGCCAGAGAGATGAGCTCTGAAGAGCTGCCCTTCCTCTGCCACGGAGAAAAAGATCACGCCAAAATCCTCTGGAGTAACGGAGAGGCTGTGGGCTTCTACTCAGTCAAACCCTCAGGCAGCTTTTCTAATTCGTTTGCCACCAGAAGCTATCAGCTCCCTGTGATGGACTCCATCTTTGTGAGGAGATGTCAGCGTGGGAAAGGCTTTGGCCTGCAGATGCTGGAGGACTTTGTGCTCAGTTTCAAAGAGGACTGTCTGGGGTTGAGGTACCCCCTCACAAAATCCATGTATAAAGTGTGTGAGAAGTACCTGAGGCAGTTCCCAGGAGACACAGACCTGCTGTGGGAGGTGGAGAGCGTCGGTGGGCCCAACCAGAGGACCAACATGGCCAGCAAGATCCAGGCCATGGATCACAGCgCAGTATCCAGGAGTCTGTCCTTCACAGAGGAATCACTTGTGATTACTGAGATGACTGAGAAGGATGTGGTCATCACCACTCAAATAAAAGAAGCTGAATCCATCGAATGCACAGTTGAAATCGtgGAGGAAGTGACAGTCCTGAGCACTACCAAAGCAGGTTCAGAGGCTGAAGTTCCACTCACAGCCCGGGGCCGGAGCAGTGGCTCAAAACGAAGGAAGACTGCAGAGGAAAAGGTTATCAGAATCGAGGACATTGAAGCAGAAACCCccagagaggagcaggagaatgTCTCTGAGTCGATGCAGACTAAGGCTGTCAGTGTGGCTCCTGAAGAACAGGGACAGGATGTAGTTGACACTGCAGCCACCAAGTCGGAACAACCAGATGCTGTCCTGAAGCCACAAGACCCTGAAACAGCTGATGTGACATCAGCTGCTACGACTGAGGAGGCACCAGCGGAAGCCGACGCCCCCCAGGATCTGAACAACACCGCCCGGGACTCACAGATCACAGTTGAGAATGTGGCATCAGAATTGGAGGAAGAGTGTCCGGAGGAAGACACTGCAGTGCCGGCAGTCTCTAAAGAAGTGTTGGAGTTACACACAGAAGCAGAAACGCTGGATAAAGTGGGGGAGGAAACTCAGATCACTGATGAAAAGTGGGAAGAAAGAGTTCCACAACACGAGGTAAGTCTGTCACCACGTGAAACATCAGAGAATGGCGAAGCAGGAATAACAGGAGGAACAACTGTCCAGCGTAAAACCCCCAGACGGAGATATACACGCCACAGCAAGCCGGAGGAGGGGGTGAAGGAGGAAACTGCAGCCCAGGACGGAGGGATAAGTTTGAGAAGAAGAACGGTCAtgaacacacccacacccaaaCGCAAATACACCAGACGCTGCCAGAAAGTCTGTGAAGACTCAGAGGAAGAGGTGGAAGAGGTGGCAGAGGAGAATGACGTTTCGGCTGAAGGAGTGGAGGAGTTAGCTGAAACTGGAGAAGGAGTAAAAGAGGATGCAGTTGAGCTGGAGGAATTAAGAGAAGAAAAGCAACAGCTGGAAGATGAACAACAACTGACAAATGAAGAGAAGACGGAGAAACAACCAGAGGCGGAGGGGACTGCActgacagaggaagaggagggtgaACATGTAACGCATGGatctgagagagaaaaagaagctGACCTGGGAGCAGGAGCTTCCACTGGGGGAGAGCAAGCACATGAACAAGAGGAGGTCGCTGACAGGCCAGAAAAAGAGATATCCACCGAGGAACTAAGCGCTGTGGAAGAAGAGACGATTCCAAAGGCAGAGGAAGCAGCAGGGGACGTTATAGCTTCAACTGAGGGGAACGGGGAGGAGAGCAAGGACGAGACGGAGCCTGTCTCGGTGATGGAAGCAGCAGAGGAGGGAGAGGCCGTCagtgtctctgctgctgcagatACAGCTGTCAGAGACACTGCTGCTGATGTAGAAACAGCAGTCAGAGACACTGCTGCTGATGCAGAAACAGCTGTCAGAGACACTGCTGCTGATGTAGAAACAGCAGTCAGAGACACTGCTGATGTAGAAACAGCTGGCAGAGACACTGCTGCTGATGTAGAAACAGCAGTCAGAGACACTGCTGATGCAGAAACAGCTGGCAGAGACACTGCTGCTGATGTAGAAACAGCTGGCAGAGACACTGCTGATGCAGAAACAGCTGTCAGAGACACTGCTAATGCAGAAACAGCAGTCAGAGACACTGCTGCTGATGTAGAAACAGCTGGCAGAGACACTGCTGCTGTAGAAACAGCTGGCAGAGACACTGCTGCTGATGTAGAAACAGCTGTCAGAGACACTGCTGCTGATGTAGAAACAGCTGTCAGAGACACTGCTGATGTAGAAACAGCAGTCAGAGACACTGCTGATGCAGAAACAGCTGTCAGAGACACTGCTGCTGATGTAGAAACAGCTGTCAGAGACACTGCTGATGCAGAAACAGCAGTCAGAGACACTGCTGCTGATGTAGAAACAGCAGTCAGAGACACTGCTGATGCAGAATCAGCTGTCAGAGACACTGCTGATGCAGAAACAGCTGGCAGAGACAGTGCTGCTGATGCAGAAACAGCTGGCAGAGACAGTGCTGCTGATGTAGAAACAGCTGGCAGAGacactgttgctgctgctgcagaaacTGCCGTCAGACAGGCTGAAGAGCCTCAGGAAAAGGAATCTGGCTCTGAAACCTCCAAGCTCCAGAAAGCCACCGTCATCCTAGTGGACATCAAAACAAGCTGCCATTATCTCAGTGTGAAGAAGGCAGACGAAACATCTGCTGATGCACAGAGTGCTGCTGCAGAAAAGcaacaggaagaggaggatggagggaaGCAGGAAGACATTACAGACCTATGTGTAGAGGTGAGTGCCGAGGCCCAGACTGCCGAGAAGGAAAAGCTTCAAGAAGACAACtctgaaaaagagaaagaatctGTGGAGGAAAAAAGTGAAGCAGAGGAAGCACTGGTTCCTGAAACAAGAGACAACACAGGTGAGGGTGTTAGTGAAGAAGCAGCAAGAGGCACTGATGAGGTGGAGGCTGTGGCAATCACACCGGAGGAGAAGCAGTCTGCAAATGGAGAGCCAGAGGACGCTGACCAGAGTCCCCCAGCAGCCGAAGTGGACGAGACGGACAAGGCGATGAGcttggaggaggaggaagcgCCAGTTGTTGAGACCAGAGCTCTGAGACGTAGAACAAAAACTAGCACAGCCACACCGAGACGCAAAACAAGAAGCAGAAAGCAAGTGGATGCACATGAAGCAGAAGAAGAACCAGCAGTGACTGCAAGAACACTGAGAGGTGGGAGGACATCTGCATCGCACACACCTAAAGGCAAATCCAGGAGAGGCCGCAAACACATCCAGGAAGAAGAGCGAAAGGGAGAAGAGGAAACGggagcagaggaggaagaggcagCAAAGGAAACAGCCGAAGAAAATACAGATATagagggagaggaaaaggaaaaggtTGAGGAAGAGGTAGAGGCAATCGTTGAAGAAGTGGGAAAGGAAAAGGTtgaagaagagggagaggaaaaggaaaaggtTGAGGAAGCGGGAGAAGAAAAGGTGGAGGAAGAGGGAAAGGTtggggaagagggagaggaaaaggTGGAGGAAGAGATGGAGGCAAAGGTTgaagaagagggaaaggaaaagGTTGAGGAAAAGGTGGGgggagaggaaaaggaaaaggttgaggaagagggaaaggttgaggaagagggagaggaaaaggTGGAGGAAGAGATAGAGGCAAAGGTTgaagaagagggaaaggaaaaggttgaggaaaagggagaggaaaaggtggagggagaggaaaaggttgaggaagaggaagagggaaaggTTGAGGGAGAGGAAAAGGGAGAGGGAAAGGTTGAGGAAGCTGCCCcagaaagaggggagggtgtAGAGCCAGAAATCGATGCGGAGGAAGGGGAAGCTGTGGCAGAGCGAGGCCGAGATGCAGCGGAAGATCCGTCAGAAGGCGTATCCAGAGATGcagacagggaggaagaggcctTAGGGGAAGAGTGTGGTGAGAGGAAAGCAGCCAAGGGGGGTGAGGAGGGGGAACTAGCACCAACCACTGTGACTAGATCTCTGAGGAGTGGTGGGAAGACGTCCAAGGCTCCAAAAAGCAGGTCCAGACGAAGCAAGAAGCAGCCAgccaaagaggaagaggaggagggacagAGACAACTCCAGAACCAGAAAGAGGGACCAAAGGAATCAGCTGAGgaagcagaggaagaggaaaaaacaGGGCTGGGGTCAGTCGAAGACCCCCCGACAGAAGGGGAGGAAGCTGtcacagcagaaacaggagagCCGTCAGAAGGAACTCTGCCGGTGGCTGAAGAGGAAGCTGCAGAGGATTCAGTACAAGAAGGAGACACTGACACTTCATTACCCAAAGCCAGCGTGGACTCAGCTGTACTGCCACCGAGTGGAGAAGAGGGGCAACAGGCAGCCCAGCTCTCGGTAAGCCATACTGATGTCCAGGAAGAAGCTGCAGCTGCAGAGGAGGCTCTTCCTGCTgaggcagaggaggagcagagagaggaagCAGCTATTGCAGAGGAGGATGTTCCTGAGGGGACAGAAAACTCTGAGCTGGAGAAGGCGACAGGGGAAGAGGATAAAGTGGAAGCAGTCCCAACAGCAGACCCAGGGGAGGGCAGAGCTAatgaagaggaggctgaagGTGTTAAGGATGAGGAGCAGGAAGCTACAGTCCCAGAAACCAGAGCACGCAGGAAGCAGGCAGGCCAAGCCACGCCCAGAAGTAGACTAACAAGAAGCAGACAGGAGAATGCTGAGGTAGGAAAGGACGCAGCTTCAGAAAGTCAGAAAGAGGAACCGACAGTCCGGGTTctgaggagggggaggaagCTTATCCCTGTCACGCAAAGACGTACAACAAAAAGAACCCACCcagatgaagaggagggaggagatgaATCTGCAGCAGGTGAGGCgagagaggcagaggaagaagaggaacaGCAGCAGATTGTTGATCAGGAGAAGGAAAAGAGACTTGATGAAAGGGATGCAACTGAACGAGTAGAAACTATGGACGCAGAAATGAGCCAAGACAAAGAGGAGACTGTGGCAGAGGAAGCTGTCTTACAACAAGATGCCTCAGAGCAGGGACAGGGCCACGGGACCGGGACAGTTGCAGATGTGGACACAGATGTTGGACAGCCTGCTGATGAGGGGAAGAGCTCGGATGTTCAAGAAGAAGTAGTCCCAACACAAGAGACAATGGAGGGGGAACAGTCAACCTCAGCAGTGATGGGAAGTCCCCAAGAGACCCTAGAGACAGCAGAGGACGACGAGGCAAAAGGTGTgtctgaggaggaggaagcaCCCGTTACTGAAAGAGGCAAAACCACCAACATACAAGAGGAAGAGGCAGCTGGAGAGAAAAGCACGGAAGCCGATGAACCAGTGGTAGGAACAAGAGTTCTGAGGAAGGGTCGGAGGTCTGCTGCTGCCACACCTCAGCGTAAACCCAAAAGAGTCCGCACACAGCCTCAGACAAAGGAAGAGCAAGAGGAAGTAGCTGCTCCTGCTGAAGAGACACAAGCAGAGGAAGCCAAAGCTGATGAGAAGGAAGACAACAGTGATGAGAAGACTGAAGAAAGAGATGGGGATGAAGCTGCACCAGAGCAGGAAGAAGAAGCTATAGAGCCAGAGGTTGAGATGGAAAAAGAAGACACGGTGGCAAAGGAAGAGGACCGGTCTGCTGTTTCTGAGCCATGtgaagacagacagggagagacgtCCGCTGGGGAAAGAGCTGAAGAGACACCAAATACAGATGAGGGAAAGGTTACTGACCAGGAAGAAGCAGAAAGTGTTGAAACAACAGTCCTGAGAAGCGGTAAAAAGACAGGGAGAGCCACAACCAGAAGCAAAACCACAAAAAGGCCAGAGGAAGAGGCAGCTGGAGAGAAAAGCACGGCAGACGGTGAACCAGCGGTAGAAACAAGAGTTCTGAGGAAGGGAAAAAGGTCTGCTGCTGCCACACCTCGGGGTAAATCCAAAAGAGTCCGCACACAGCCTcagacaaaggaagaggaagaagctgctcctgctgaagAGACACAAGCAGAGGAAGCCAAAGCTGATGAGAAGGAAGACAACAGTGATGAGAAGACTGAAGAAAGAGATGGGGATGAAGCTGCAGCAGAGCAGGAAGATGAAGAGGCAGGGCAGGAACCACTTGAGGAGAAAGGGGAGGAAGCAGAGGAAGAAGGAAAGAGTATGGAAatggacaaagacaaagaagtgCGAGAGGAAGAGTCTGCTGTAGGAGATGCAGAGCAGATGAAGGAAGTATTGCCTGAAGAAGAGGACAAGAGTGCGGAAGCTGTGGAAGAGAGTTCACCAGCTGAGGTAGAAGAGACAACGTCAGCCGAGGAAGAGGAAACCACCGTCACAGAAGGATCCCCTGAAGTGGGAGGTGACAGTGGCGTCGCTGGAGAAGAGGATCTATCTGTGGCGGCAGAGGAAGAAGCTCCGGCTGTAACAACCAGAGCGCTGCGGAGCAAAACAAAAACTTCAGCCGCCACTCCATCACGGAGGTCCAGGAGAGGAGCAGTGCAGACGCAGcagcaggaagaggaagatCCTGAGGAAGAAGAAGTGCACCAATCGACTGGTGACTCACCTCGAAGATCGGTGCGAAAAAAGCCCCGAGTGGATTACCGAGAAAACGATGATGAAGGAGAGCGAGGCGAGACGGAGGCCACAGCTGACCAGCAggaagaggatgaagaggaggacagagaggacgAGAAAGCGAAACGTTCTGCAGAGCAGCCGGCAGAGAAGCTGGACAATCTGAGTTTAGTGTTAGACACAGATGAGGAGGGGGAGACAGCAGGGTTGAGTCCAGAGGACCAAGAAGAGGAGCAGAATATGTCAGAGGAAGAGGCGGAGCCTGTAGTGATTGGAAAGAGAGTTTTAAGAGGGAGGTCAGTTCCTTCAGTGATAATCACCCCCCAGGCTAAGTCCACACGCCGCAGTGCTAGAGTTCAGAAAgcggaggaggaagaagagaagagccCGCGCTCCGCTCAGAAGAGAAGAGCTGAAGGAACACCAGCTCGCAGATCTCAGCGTTACAGCAGAGTTTAGGATGCTCTGAATGCTACGATCAACAtccacacaaaatacatgtagtAGTGTGCAGTCACAGAACTGGGAAATGCAAAAGAAACAACACATGCTCATAGTCAATGTTTAATGCAAGCTTCGGCAGTGTGCAGGCAGGCTCACAGCGTACACTTACAAACACCTGTGTGTCCTCCATGTGGACTTAGAGCGAGACCCTTTGAAATGTTAGTTAGTGAACATGAACACACGTTTCAGCATGAACCATTAACCTGTGacagagccccccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804453.1 True 7903 mRNA 0.52 12 3272451 3293307

Neighbor

gene id symbol gene type direction distance location
traf2a traf1,LOC106956159,LOC103356465,LOC106930528,LOC103141905,LOC108249884,LOC102784265 coding downstream 60452 3196486 ~ 3211999 (-)
b3galt8 NA coding downstream 224649 3045676 ~ 3047802 (-)
zgc:162952 LOC103356462,LOC104930869,LOC101468259,LOC102311328,LOC100693656 coding downstream 230195 3015609 ~ 3042256 (-)
LOC120561357 NA coding downstream 416748 2853308 ~ 2855703 (-)
hps4 hps4,LOC102793116 coding downstream 588748 2670234 ~ 2683703 (-)
LOC120561352 gcnt4 coding upstream 17760 3311067 ~ 3315203 (-)
LOC120561346 NA coding upstream 22509 3315816 ~ 3354947 (-)
apba1a apba1 coding upstream 261766 3555073 ~ 3603158 (-)
ptar1 ptar1 coding upstream 313088 3606395 ~ 3621480 (-)
pias2 pias2 coding upstream 505725 3799032 ~ 3816820 (-)
G58852 NA non-coding downstream 26054 3246081 ~ 3246397 (-)
G58818 NA non-coding downstream 110324 3161885 ~ 3162127 (-)
G58807 NA non-coding downstream 259070 3011390 ~ 3013381 (-)
G58806 NA non-coding downstream 273036 2999199 ~ 2999415 (-)
G58748 NA non-coding downstream 398822 2873355 ~ 2873629 (-)
G58922 NA non-coding upstream 141905 3435212 ~ 3467122 (-)
G58931 NA non-coding upstream 194656 3487963 ~ 3488550 (-)
G58932 NA non-coding upstream 196498 3489805 ~ 3490230 (-)
G58933 NA non-coding upstream 197413 3490720 ~ 3492557 (-)
G58935 NA non-coding upstream 202937 3496244 ~ 3496596 (-)
si:ch211-102c2.4 NA other downstream 32388 3232606 ~ 3240063 (-)
tnc tnc,LOC104930867,LOC103356464 other downstream 137902 3049669 ~ 3134549 (-)
LOC120561349 donson,LOC102310661 other downstream 425844 2834188 ~ 2846607 (-)
LOC120561394 LOC107097799,LOC103353613,LOC101077666 other downstream 579908 2690610 ~ 2692543 (-)
si:ch211-107p11.3 LOC103353652,LOC102075650,LOC108234931,LOC104950460 other downstream 583364 2685891 ~ 2689087 (-)
G58919 NA other upstream 103862 3397169 ~ 3397496 (-)
G58920 LOC106099046,LOC107687292,LOC107712180,LOC107663003 other upstream 122320 3415627 ~ 3416854 (-)
G58994 NA other upstream 395322 3688629 ~ 3689338 (-)
golph3a golph3,LOC103397487,LOC108249570 other upstream 916441 4209748 ~ 4224568 (-)
sub1b sub1 other upstream 1130842 4424149 ~ 4430090 (-)

Expression


Co-expression Network