LOC120561368 (LOC104951926)


Basic Information

Item Value
gene id LOC120561368
gene name LOC104951926
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 16495235 ~ 16504736 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804459.1
TGCATgaacttttgtcaccgcccacTTGCACTTGTTACTGTTGCAGGCTGAATTGCCACGGGAGACCCCAAACTATCTGTGCCTGTCATCGCCATCGCCATGGGAAGAAGCCTGCCGTGTGTCTATTTGCTTGTCTTAGTCATTTTCCAAGAGGCGTGTGGCTTAAAGATTCAGAACAAGCTGCTGGGTAAATGTCTGCAGGTGCATGAAGGAACTTTGGGAGGCAGAGTATCTCTGGGTGACTGCAGCCCATATTCGGCCCTACAGGAATGGCGTTGGCTACCAGAGAGCCAGGCTCTCAGCAATCACCACACTGGGGAGTGTCTGACTGCACCAGGAGAGCAGTATGAAGGTGTCCTCCTGCAGCGCTGCGTCTTTCGGGCTGGAAGTGATGAGTCTGATGCCGGATTGGCAGCGGTGGATACAGGCAGAGGGGCAAGCAGCCAGGCATGGTCCTGTTCCAAAAAAGGACACCTCACTTTGAAAGGAAGGGGGCTACATCTTAGTGCCACACAAGAATCTACTTTGGTCTTCCTTTCGAGGGAACATAAGCAGCCTGGCAGCAGGTGGCGGACATTTGATAACCAGACACTATGCAATGGGAGAGACAGCAAACATTACCAACACCAACCTCATCACCATCTGGGTAAATCTTTGGAACCTGGGATTTTTCCAAGTGCCATCTCTGATACACAAAGACAGGCTGAACCATTTGGAGGTATAATGGCCGGGGATGTCACAGAAACATATTATCCAGTAATGGATGTGCCTCTTTGGTCCCTAAGCACCAAATCCCCTGCAGATCCCACCATGGTTTTCTTCCGTATGGACTACGGGATGGGCTGGAAGATAACCATGCTGGTACTAAGCTCTTTGGCTCTGGTCCTGGGGACTGTGATTCTTATCCTCAATGTTTACTCCAATAGAAGGAAGAAggtggtgtgtgttttgaagTCATACACTCCGAGGCCAGAGGTGAGTGTTCCTGGTTCCCCAGCAGCCAGTGAAAGAGCCCTGCTGACAGAGCATGCCATGCGCCTCCCACACTCCTCCCCCACTTTACGAGGAGAAATCCTGATTGAGTGGAAAGATGGCACTGTCACTCCACTGTACGAGGCCTGAAGACTGTACTGTATCTTTTGAACCTAGGTGTGTTTATGCAAGCATGGTTTCTTGTGCAAGGTTATGTAACTGAATGTGTCTAAAGGAGGGGAACatgaggaaaaacaaaaggcaaaataagtatttttgttgtttctgttgGCATGGAAATGACAGTAAGCAAACTATTTCATAAAATGGAAAGTTCATGGATCAGTATCAGACCGTTTCTGTAAGACTTAGCTGCCACAGGAAGATAAACGCTGTTGTGAAGCTGCCAGAATATTGTAGGACCATATGTTTTCCAAAATACAGAGTCCTGACTTCTGCTGTTTGAGATTTGAGGGAGTGCTTGTTGGATGAAAggactgtaaaataaatgtaagaaTTGAGTCATTGTTTTTCGGCTTTATATAAGTAAAATCCAAGGGCTCAACAATGTACCCGATAACTTAGGCCTTTATTTAGATAAATACTTAGGAACCTAATCTTTGTTTTCCTATGTCTGAAGTATCATCTAGCCccaatttgtcattttttgtgCTGTGGGATGAGCTCAGATGTCTCTTTACATAATACATAATTGCTTTTGAAGAATTTTGAATGTCTGCATGCATTTTTGACATATCTGTGATTTAACATGATGTCTTACAACCTATCACAATATACACTGGCTCCTGAGACCCACACCCTTTATAATGGCAGTTACTGGGCTATTTTAGGATAATACAATTGTGTTGCAAGAAACACTGATTGATGAAAGTTGTTTTCCTAACataattttgtattttctgtatttcagAAGAAAATCTTGTTTATGTAGGAAATGTCTGTAGTCTGacacatttcattattttaatgGACTTTGCTTTGTACTGACATTAcataaacatttattaatttaaattgtTCATAGAAACAGTGCTTTTAACCGACCTGGACCTATTATATCTCCTTGGAAACAGCAGTTGATGAAACTGTCTTCCCTTAAGGTCCACTTGAGCTTTTAACCTTGATGTTTAAACTTTCCATTATTCTCAACACTTTTGGGACCATCTCAATCTTAACATTTCACTGGGAAGACCGTATGATATAGTTGAAAGCTCCAAAACCTCTAGTAGAGACCTCCAGGTTGACTTTTTTTGAATTTATATGTGGCAACCTGATAAACCACTAATTTGTGCTGTTAGTCTTTTAACAAAATAAGTATTTttataatgttaactagcaAATAAaatgggatatatatatatatacacacacacacacacacacacacacacacacacacacacacacacacacacacactgtacacagtTGACTTGTACTGTTTTTATTATCATGATCAGGCTTGCAGAGAACATTAAATTCCCAGTGGCACAGAAAACTCCCAGCGGGAGGAACCTGTTTACAACAGAGAACCAAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC104951926

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804459.1 True 2530 mRNA 0.42 6 16495235 16504736

Neighbor

gene id symbol gene type direction distance location
LOC120561387 NA coding upstream 2600 16487394 ~ 16492635 (+)
LOC120561386 NA coding upstream 11206 16477498 ~ 16484029 (+)
LOC120561380 NA coding upstream 27259 16461238 ~ 16467976 (+)
kiaa0825 kiaa0825 coding upstream 556382 15811685 ~ 15938853 (+)
trnac-gca_21 NA coding upstream 876091 15619073 ~ 15619144 (+)
LOC120560896 LOC103362386,LOC102790232,LOC102295658,LOC102208013 coding downstream 32390 16537126 ~ 16540185 (+)
wdr54 wdr54 coding downstream 45514 16550250 ~ 16554512 (+)
rhobtb4 LOC103362416,LOC103470451 coding downstream 67592 16572328 ~ 16616256 (+)
si:dkey-40c11.2 LOC104955420,LOC104955419 coding downstream 123785 16628521 ~ 16663697 (+)
mef2cb mef2c coding downstream 320079 16824815 ~ 16895188 (+)
G61975 NA non-coding upstream 296364 16123200 ~ 16198871 (+)
LOC120560394 NA non-coding upstream 352436 16134594 ~ 16142799 (+)
G61968 NA non-coding upstream 438530 16035451 ~ 16056705 (+)
G61970 NA non-coding upstream 444542 16048383 ~ 16050693 (+)
G61966 NA non-coding upstream 449397 15961601 ~ 16045838 (+)
G62033 aqp3,LOC103362379,LOC107393848,LOC105031174 non-coding downstream 7435 16512171 ~ 16514043 (+)
G62082 NA non-coding downstream 62746 16567482 ~ 16567714 (+)
G62085 NA non-coding downstream 105741 16610477 ~ 16620136 (+)
LOC120560795 NA non-coding downstream 391852 16896588 ~ 16943176 (+)
G62126 NA non-coding downstream 448189 16952925 ~ 16953637 (+)
LOC120560890 NA other upstream 19330 16468310 ~ 16475905 (+)
fam172a fam172a,LOC102785942 other upstream 395751 15943698 ~ 16099484 (+)
mctp1a mctp1,LOC102782783 other upstream 718094 15636798 ~ 15777141 (+)
LOC120560526 NA other upstream 962439 15518780 ~ 15532796 (+)
zgc:101664 NA other upstream 1060300 15431708 ~ 15434935 (+)
LOC120560897 LOC105925468 other downstream 28180 16532916 ~ 16534175 (+)
LOC120560947 edil3 other downstream 780912 17285648 ~ 17414595 (+)
tmem167a tmem167a,LOC103397084 other downstream 1063277 17568013 ~ 17572705 (+)
cmya5 cmya5,LOC106958347,LOC104953151 other downstream 1493950 17998686 ~ 18011030 (+)
thbs4a thbs4,LOC104953147,LOC106958346 other downstream 1510669 18015405 ~ 18029386 (+)

Expression


Co-expression Network