LOC120561380


Basic Information

Item Value
gene id LOC120561380
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 16461238 ~ 16467976 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804474.1
TAAcataaacaaggaaatgaatttgacccgttctccctGCCGCTTGGTCAGTTGCTGCGCGATATggagccccggctgtcaatcaatgtcttccagtgatgcgggcccctgattggaccagGCCCGTAAGCAACCGtgtaccctgcttaccgatagttaggcatctgaatcactcaattctcattggctacccgccaaagtggcaggtagattgacagtgttacccgccaattgcaaaattcacccgcatttggcgggtgggcgggtgttaatttcatgccTTGCACCCAAAACTTGTCTTTTGGGCTTTACCTCTTTCCCAGCAAGTCTCCGAGACCCGCTTAGTAGGATGCCATTCATCATGGCCCCTTAAGTTTATCCAGCAATTGGCCATCAGCTGTTTTCTACGGAGCCTCCCACATCACTATTCCTTCCTATGCACCATATATCCATGTGTTGCACAGGGTTGTCCGCACCTATCAGCCCACAGTCTCTCCTTTGTACACTAGATGGTAGTAGAGATCTTTGAGCAGACTATGGAAAGACTTTCTTATATAGGCGTGTCTTCACGACAGCCTGTGGtggtcatggatgtattaagggAATTAAGGTGGTGGTCTTCTAGTTTTCCCACAGTTCAGATGGTAGACTGTTTATTCATTTAACcagtacatttttcatttacGACAATGCCTGCGATTCAAAGCTTAACGATGACTTACGACGCGCTGAATGAGTACGGGACGTTTTCAGAGGGAGACACTCTCACTGGAAAAGTAACGCTGGCCTTGTCAAAGGACACCACAGTTGAAAGCCTGTTTGTCAAAGCTAAAGGAGACGCTGATGTACGTTGGACGAAAAAGGTCGGCGATCGCAACCATACATACTCTGCACACAAGAGATATTTCAAGCTGAAGCAGTTTTTGATCCCCGAGAACTCTAATGAAACTCTAGTTCCCCAAGGAACCCATGTCTATAAATTCAGCTTTACCATACCACCAGGAAGCAGCCCTTCATCTTTCAAGGGGAGTCATGGAAAGATTGTCTACAAGCTGGAAGCCAAGCTGTCCAGGAGCTGGAGGCTTAACCGTACAGTAGAAACGGACATACATTTTGTCTCCAAGGCCTTTCCAAACCTTCATTCTCTGGTGTCACGTCAAGTTGGTTCAACAAAGAAAGACATGGGGCTTTTCTCAAAAGGACATGCACACATGGATGTCATTGTTGACAGGAAAGCCTATGCCCAAGGTGAAACAATGGTGATTGTTGCAAAAATCGACAACTCCTCATCCAGTGAGATGATACCCAAATTCAGTTTAATCAAGGATGTGGTGTACCGTGCCAATGGCCATACCAAGCATGAGAGCAGCGTTATCCAGAAATTGGTAGACAACTGTATTAAATCCCGAACACAGAGGGATGTCAGGTGTGCAATCAAGATTCCTCGTGATCAGACGCCAACAATCCAGAATTGTGATATTATCTCAGTGGAATACCATTTAAAGgCGTATCTGGACATCAGCTTTGCTTTCGATCCAGAGGTCATTTTCCCAGTGGTCATTATTCCACAAGACTTATCTCCTGGCCCTCGGCCTGGTGTGCCTATGGGTCCCTATCCAGCTGGGGCTATTGGGGGCCCGAGTGTAAGCGACTTCCCTCCCCCTGCGGTGTCTATGGGTCCCTATCCAGCTGGGGCTATTGGGGGCCCGAGTGTCAGCCACTTCCCTCCCCCTGCGGTGTCTATGGGTCCCTATCCAGCTGGGGCTATTGGGGGCCCGAGTGTCAGCCACTTCCCTCCCCCTGCGGTGTCTATGGGTCCTTATCCTGTATCCCTACACTCAGGCAGTTATGGATACCCAGGAGCCCAAATGTCCTCGGCACCACCACGAGTGCACCCAGATAACCCACCGGCGTATCCTGGTACACCAGGTGTCTACCCTGCACAGCCGGCACACATTAATGGGGGCTACAATAACCCAGTGCCACCGCTGGCTGCTCTGTATGGATCtccattttcttcttcatcatcatcttctgTGCTTCACCCGCCGCCTACTGCCCCAACATTTCAACCACCCCCACCTGCCCCAGAGCTCCACCCATCCCGTCCTCCTCCTCAACCCTTCAACACATCCCCAACTGCTCCGACATACACCCTGCTGCCTTCTGCACCAATGATGAACACCGACTTCCTGTCTCAATCGGATGAAGCTCCTCCAGCATATTCACTCCTTTTCCCATCTTCTGCTACTGACAAatctgttgcaaaataatagaacGTATGCATTGCTTAATGACTAAATCAGTTCATGAATTATGATGTCAAATTCTAATGCTTAGGATAGTTTGGAATGTGAAATACATTCACCTATATTGTGTCTTTAACACTTTATTAGTGTTGTTGAATTAAAAGTCTAAATTTGAAATATGAATGGCACTATTGCCATATTTACTCTTTGTATGTAAACAGTTGCATACGAAAATAGGACTTTTGCATTGTATGTGATGGCTGTTTTCTGGTCAGTTCAGGTTGCTAGTTGGCTTTGTCTAGCTGCTAACCTAATCACTCAAACCTTAATCATCAGGATACACTGTGTGGCCCATGTTTTGTAGCAAAAGGCTTGTTGAGGCAGTTTTCATGTCTGTCTTGGACTATGGTGATGTGATTTATAGACCTGCATCATCTTCAGCTCTTAAATCTTTGGACTCAGTCTATCACTCCACCTTGAGACTCATAACCGGTCATGTCTATGGTAAACatcattgtattttttatttttttatatatttaaatatgaaaatggTATCTGGTATCTCTTTATCGATAAGGCTTGAATTGGAAAACTGCCATCTTACCTTACAGAACTTCTCTGTTACTCAGAGGGACATTATCAGACTCGCTCTGCTAACTGGCTTTTACTTCATGTTCCACGAGCTCGGTCTGAACTTGTAAACACTGCTTTTAGTTTCAGTGCACATGACTCCTggaacaaattacaaaaaacacttTCTTAAAATCAACTCAGTTGTGCCTCTTGGACAATCTAGAAATCTGGTTTCAAACCTTCAAACTTATTCTTATAACTGCtttacataattgtattttcttttgcatcccTATTATcctaatgtatttattaaatttCCAATTCTGTCCTTCTGTATTTCTTATGATTGtactttctgtgttgttgttctgtatttgtctttgtGCTCTGACTGAATTGCACGTGCCTTGTTCAACTCAAGTGCCTAGACGGATCATTTATAAAGTGTTATAGTTTATACCTGCCCTCTCTACCTCACTCTTTTGCTTGGAgacttattaaaagaaaatagacatgtgacttcattttttattaaagtcAACTAAGAGGCtaattatacatttatttttatttttcaccagtAACGCCAGACAACTACTTCTATTTAATTACACAGTACTGTTTTCTCTGATTTgtaaatttaaataaagaacTGCCAGTGAAA
>XM_039804475.1
TAAcataaacaaggaaatgaatttgacccgttctccctGCCGCTTGGTCAGTTGCTGCGCGATATggagccccggctgtcaatcaatgtcttccagtgatgcgggcccctgattggaccagGCCCGTAAGCAACCGtgtaccctgcttaccgatagttaggcatctgaatcactcaattctcattggctacccgccaaagtggcaggtagattgacagtgttacccgccaattgcaaaattcacccgcatttggcgggtgggcgggtgttaatttcatgccTTGCACCCAAAACTTGTCTTTTGGGCTTTACCTCTTTCCCAGCAAGTCTCCGAGACCCGCTTAGTAGGATGCCATTCATCATGGCCCCTTAAGTTTATCCAGCAATTGGCCATCAGCTGTTTTCTACGGAGCCTCCCACATCACTATTCCTTCCTATGCACCATATATCCATGTGTTGCACAGGGTTGTCCGCACCTATCAGCCCACAGTCTCTCCTTTGTACACTAGATGGTAGTAGAGATCTTTGAGCAGACTATGGAAAGACTTTCTTATATAGGCGTGTCTTCACGACAGCCTGTGGtggtcatggatgtattaagggAATTAAGGTGGTGGTCTTCTAGTTTTCCCACAGTTCAGATGGTAGACTGTTTATTCATTTAACcagtacatttttcatttacGACAATGCCTGCGATTCAAAGCTTAACGATGACTTACGACGCGCTGAATGAGTACGGGACGTTTTCAGAGGGAGACACTCTCACTGGAAAAGTAACGCTGGCCTTGTCAAAGGACACCACAGTTGAAAGCCTGTTTGTCAAAGCTAAAGGAGACGCTGATGTACGTTGGACGAAAAAGGTCGGCGATCGCAACCATACATACTCTGCACACAAGAGATATTTCAAGCTGAAGCAGTTTTTGATCCCCGAGAACTCTAATGAAACTCTAGTTCCCCAAGGAACCCATGTCTATAAATTCAGCTTTACCATACCACCAGGAAGCAGCCCTTCATCTTTCAAGGGGAGTCATGGAAAGATTGTCTACAAGCTGGAAGCCAAGCTGTCCAGGAGCTGGAGGCTTAACCGTACAGTAGAAACGGACATACATTTTGTCTCCAAGGCCTTTCCAAACCTTCATTCTCTGGTGTCACGTCAAGTTGGTTCAACAAAGAAAGACATGGGGCTTTTCTCAAAAGGACATGCACACATGGATGTCATTGTTGACAGGAAAGCCTATGCCCAAGGTGAAACAATGGTGATTGTTGCAAAAATCGACAACTCCTCATCCAGTGAGATGATACCCAAATTCAGTTTAATCAAGGATGTGGTGTACCGTGCCAATGGCCATACCAAGCATGAGAGCAGCGTTATCCAGAAATTGGTAGACAACTGTATTAAATCCCGAACACAGAGGGATGTCAGGTGTGCAATCAAGATTCCTCGTGATCAGACGCCAACAATCCAGAATTGTGATATTATCTCAGTGGAATACCATTTAAAGgCGTATCTGGACATCAGCTTTGCTTTCGATCCAGAGGTCATTTTCCCAGTGGTCATTATTCCACAAGACTTATCTCCTGGCCCTCGGCCTGGTGTGCCTATGGGTCCCTATCCAGCTGGGGCTATTGGGGGCCCGAGTGTAAGCGACTTCCCTCCCCCTGCGGTGTCTATGGGTCCCTATCCAGCTGGGGCTATTGGGGGCCCGAGTGTCAGCCACTTCCCTCCCCCTGCGGTGTCTATGGGTCCTTATCCTGTATCCCTACACTCAGGCAGTTATGGATACCCAGGAGCCCAAATGTCCTCGGCACCACCACGAGTGCACCCAGATAACCCACCGGCGTATCCTGGTACACCAGGTGTCTACCCTGCACAGCCGGCACACATTAATGGGGGCTACAATAACCCAGTGCCACCGCTGGCTGCTCTGTATGGATCtccattttcttcttcatcatcatcttctgTGCTTCACCCGCCGCCTACTGCCCCAACATTTCAACCACCCCCACCTGCCCCAGAGCTCCACCCATCCCGTCCTCCTCCTCAACCCTTCAACACATCCCCAACTGCTCCGACATACACCCTGCTGCCTTCTGCACCAATGATGAACACCGACTTCCTGTCTCAATCGGATGAAGCTCCTCCAGCATATTCACTCCTTTTCCCATCTTCTGCTACTGACAAatctgttgcaaaataatagaacGTATGCATTGCTTAATGACTAAATCAGTTCATGAATTATGATGTCAAATTCTAATGCTTAGGATAGTTTGGAATGTGAAATACATTCACCTATATTGTGTCTTTAACACTTTATTAGTGTTGTTGAATTAAAAGTCTAAATTTGAAATATGAATGGCACTATTGCCATATTTACTCTTTGTATGTAAACAGTTGCATACGAAAATAGGACTTTTGCATTGTATGTGATGGCTGTTTTCTGGTCAGTTCAGGTTGCTAGTTGGCTTTGTCTAGCTGCTAACCTAATCACTCAAACCTTAATCATCAGGATACACTGTGTGGCCCATGTTTTGTAGCAAAAGGCTTGTTGAGGCAGTTTTCATGTCTGTCTTGGACTATGGTGATGTGATTTATAGACCTGCATCATCTTCAGCTCTTAAATCTTTGGACTCAGTCTATCACTCCACCTTGAGACTCATAACCGGTCATGTCTATGGTAAACatcattgtattttttatttttttatatatttaaatatgaaaatggTATCTGGTATCTCTTTATCGATAAGGCTTGAATTGGAAAACTGCCATCTTACCTTACAGAACTTCTCTGTTACTCAGAGGGACATTATCAGACTCGCTCTGCTAACTGGCTTTTACTTCATGTTCCACGAGCTCGGTCTGAACTTGTAAACACTGCTTTTAGTTTCAGTGCACATGACTCCTggaacaaattacaaaaaacacttTCTTAAAATCAACTCAGTTGTGCCTCTTGGACAATCTAGAAATCTGGTTTCAAACCTTCAAACTTATTCTTATAACTGCtttacataattgtattttcttttgcatcccTATTATcctaatgtatttattaaatttCCAATTCTGTCCTTCTGTATTTCTTATGATTGtactttctgtgttgttgttctgtatttgtctttgtGCTCTGACTGAATTGCACGTGCCTTGTTCAACTCAAGTGCCTAGACGGATCATTTATAAAGTGTTATAGTTTATACCTGCCCTCTCTACCTCACTCTTTTGCTTGGAgacttattaaaagaaaatagacatgtgacttcattttttattaaagtcAACTAAGAGGCtaattatacatttatttttatttttcaccagtAACGCCAGACAACTACTTCTATTTAATTACACAGTACTGTTTTCTCTGATTTgtaaatttaaataaagaacTGCCAGTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804474.1 True 3492 mRNA 0.44 7 16461238 16467976
XM_039804475.1 False 3423 mRNA 0.44 8 16461238 16467976

Neighbor

gene id symbol gene type direction distance location
kiaa0825 kiaa0825 coding upstream 522385 15811685 ~ 15938853 (+)
trnac-gca_21 NA coding upstream 842094 15619073 ~ 15619144 (+)
trnac-gca_20 NA coding upstream 842423 15618744 ~ 15618815 (+)
trnac-gca_19 NA coding upstream 843282 15617885 ~ 15617956 (+)
LOC120561471 NA coding upstream 848656 15604966 ~ 15612582 (+)
LOC120561386 NA coding downstream 9522 16477498 ~ 16484029 (+)
LOC120561387 NA coding downstream 19418 16487394 ~ 16492635 (+)
LOC120561368 LOC104951926 coding downstream 27259 16495235 ~ 16504736 (+)
LOC120560896 LOC103362386,LOC102790232,LOC102295658,LOC102208013 coding downstream 69150 16537126 ~ 16540185 (+)
wdr54 wdr54 coding downstream 82274 16550250 ~ 16554512 (+)
G61975 NA non-coding upstream 262367 16123200 ~ 16198871 (+)
LOC120560394 NA non-coding upstream 318439 16134594 ~ 16142799 (+)
G61968 NA non-coding upstream 404533 16035451 ~ 16056705 (+)
G61970 NA non-coding upstream 410545 16048383 ~ 16050693 (+)
G61966 NA non-coding upstream 415400 15961601 ~ 16045838 (+)
G62033 aqp3,LOC103362379,LOC107393848,LOC105031174 non-coding downstream 44195 16512171 ~ 16514043 (+)
G62082 NA non-coding downstream 99506 16567482 ~ 16567714 (+)
G62085 NA non-coding downstream 142501 16610477 ~ 16620136 (+)
LOC120560795 NA non-coding downstream 428612 16896588 ~ 16943176 (+)
G62126 NA non-coding downstream 484949 16952925 ~ 16953637 (+)
fam172a fam172a,LOC102785942 other upstream 361754 15943698 ~ 16099484 (+)
mctp1a mctp1,LOC102782783 other upstream 684097 15636798 ~ 15777141 (+)
LOC120560526 NA other upstream 928442 15518780 ~ 15532796 (+)
zgc:101664 NA other upstream 1026303 15431708 ~ 15434935 (+)
spinb spin1,LOC103373448,LOC108245887,LOC101477468,LOC100698355,LOC106527790 other upstream 1108613 15249744 ~ 15352625 (+)
LOC120560890 NA other downstream 334 16468310 ~ 16475905 (+)
LOC120560897 LOC105925468 other downstream 64940 16532916 ~ 16534175 (+)
LOC120560947 edil3 other downstream 817672 17285648 ~ 17414595 (+)
tmem167a tmem167a,LOC103397084 other downstream 1100037 17568013 ~ 17572705 (+)
cmya5 cmya5,LOC106958347,LOC104953151 other downstream 1530710 17998686 ~ 18011030 (+)

Expression


Co-expression Network