LOC120561386


Basic Information

Item Value
gene id LOC120561386
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 16477498 ~ 16484029 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804482.1
CCCATTTGCAGAGCCAGACAGTCAATACTTTGAGCTACAAGTTTGGGAAACAGATCGTGTTTTGGCtgacatatttaaaatgtctccGATTAAAGACTTATGTCTGGCTTGTGAAGCTATCAACGAAGAAGCAACTTTTTCTGAAGGAGACACTGTCGCAGGCACAGTCACTTtcactttgaagaaaaaaaccaaAGTGAAGAGTGTGATGGTGAAAGCCAAAGGGGACGCGAACGTATCCTGGTCAGAAGGCAGCGGAGACGACGAGAGATCTTACACCGACCACAGGAGATACTTTAAACTAAAAGAGTACTTAGTTGCAGAAGATTCCGAAGGCACTGTTCTTCCCCAAGGAGTCCATTGCTTTAAGTTCAGGTTTCAAATTCCACAGGGGGATATGCCATCATCCTTCAAGGGGTTTCATGGAAAGATTGTCTACATGCTTGAAGCCAAGGTGTCCAGGGGCTGGCTGAGGCGTTCTCGAGTACAAACAGAGTTCAATTTTGTTTCAAAGTCCTTTCCACACCTTGGCCATGGAATGTGTCCCCAGTCTGGTTCAGTGGCTAAAGAAATCGGGGTTTTCTCTAAAGGACAGGTCCAACTGTCTGCTACCGTTAACACAAAGGTTTGCTCTCCAGGTGACACTTTATCTGTTGTTGCCAAGATTTGCAACTCCTCTTCCAAAAAAGTGAAGCCCAAATTCAGTTTACAGCAGAAAACAGTGTACCGCGCCAGTGGCTCCACCAATTCTCGTGACCAAACTCTATGCAAAATAGTTGGAGAGACTATCGCACTGAACTCAGAGGAAACTGTCTCCTGCCAATTGAAGATTCCTGCCGATGCCATTCCTACACTCCATCATTGTGAAATCATCTCAGTTGACCATTACCTCAAGGTGTATTTGGACATCAGTTTTGCCACTGACCCAGAGGTGGTGTTTCCACTGGTCATCGTTACTTCCAGCTTTGCCCACCCTTACCCTGGTGAGGCTGTGGGGCCTTACCCAGCTGGGGCCCCAAGTTACAGCGACTTCCCTCCCCCTGCTTTCCCTATTGGTCCTTATCCTGTACCTGCAGGTCCAGGTGCTTATGGGTACCCAGCGTCAGATCCCACTCAAAATGGAACCATAAGTGGCTGTAATAATCAGTGGCCACAACAGGCCCCTTCATGTGGTTTTTCAACTACAGCTTCATCTTTAATGCAGCAACAAGCCCCTACTGCTCCGCCTCTAGTTCAACAGGGAGAAGATCCTCCCTCTTATATGTCCCTTTTTTACCCTTCTCAGGACACTCTCAGTAGCACTGGGTCAGAGCACAAAAGCTGAGCTTCAAAAAGAATACAAATGTCCCTCCTGATTGTTTAGAATTGGCCTGAAAGTACCGAGCCCCGGAGAtgacatggaggaaaaaaaataaataaataaatacatgtactgGGGGCAAACAAAGTCAAGATCTTgagagtgtttttttatttgttcgttttttttttcccctccatgtcacctccggggctcTGTATGAAAGACATACCAATGtgaactttctggagggctcccatgaagctttgtgctggggagagacatGTGTGATGGgtttatggtgttgtcattcatacatggtttattgtctattttgttattattttgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804482.1 True 1649 mRNA 0.46 6 16477498 16484029

Neighbor

gene id symbol gene type direction distance location
LOC120561380 NA coding upstream 9522 16461238 ~ 16467976 (+)
kiaa0825 kiaa0825 coding upstream 538645 15811685 ~ 15938853 (+)
trnac-gca_21 NA coding upstream 858354 15619073 ~ 15619144 (+)
trnac-gca_20 NA coding upstream 858683 15618744 ~ 15618815 (+)
trnac-gca_19 NA coding upstream 859542 15617885 ~ 15617956 (+)
LOC120561387 NA coding downstream 3365 16487394 ~ 16492635 (+)
LOC120561368 LOC104951926 coding downstream 11206 16495235 ~ 16504736 (+)
LOC120560896 LOC103362386,LOC102790232,LOC102295658,LOC102208013 coding downstream 53097 16537126 ~ 16540185 (+)
wdr54 wdr54 coding downstream 66221 16550250 ~ 16554512 (+)
rhobtb4 LOC103362416,LOC103470451 coding downstream 88299 16572328 ~ 16616256 (+)
G61975 NA non-coding upstream 278627 16123200 ~ 16198871 (+)
LOC120560394 NA non-coding upstream 334699 16134594 ~ 16142799 (+)
G61968 NA non-coding upstream 420793 16035451 ~ 16056705 (+)
G61970 NA non-coding upstream 426805 16048383 ~ 16050693 (+)
G61966 NA non-coding upstream 431660 15961601 ~ 16045838 (+)
G62033 aqp3,LOC103362379,LOC107393848,LOC105031174 non-coding downstream 28142 16512171 ~ 16514043 (+)
G62082 NA non-coding downstream 83453 16567482 ~ 16567714 (+)
G62085 NA non-coding downstream 126448 16610477 ~ 16620136 (+)
LOC120560795 NA non-coding downstream 412559 16896588 ~ 16943176 (+)
G62126 NA non-coding downstream 468896 16952925 ~ 16953637 (+)
LOC120560890 NA other upstream 1593 16468310 ~ 16475905 (+)
fam172a fam172a,LOC102785942 other upstream 378014 15943698 ~ 16099484 (+)
mctp1a mctp1,LOC102782783 other upstream 700357 15636798 ~ 15777141 (+)
LOC120560526 NA other upstream 944702 15518780 ~ 15532796 (+)
zgc:101664 NA other upstream 1042563 15431708 ~ 15434935 (+)
LOC120560897 LOC105925468 other downstream 48887 16532916 ~ 16534175 (+)
LOC120560947 edil3 other downstream 801619 17285648 ~ 17414595 (+)
tmem167a tmem167a,LOC103397084 other downstream 1083984 17568013 ~ 17572705 (+)
cmya5 cmya5,LOC106958347,LOC104953151 other downstream 1514657 17998686 ~ 18011030 (+)
thbs4a thbs4,LOC104953147,LOC106958346 other downstream 1531376 18015405 ~ 18029386 (+)

Expression


Co-expression Network