LOC120561387


Basic Information

Item Value
gene id LOC120561387
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 16487394 ~ 16492635 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804483.1
CCAGACAGTCAATACTTCGTACCGTTTAGCCACAAGTTTGGGAAACAGAGCGTGTTTTGGCCGATATATCTAAAATGTCTCCGATTAAAGACTTATGTCTGGCTTGTGAAGCTCTCAACGAAGAGGCAACTTTTTCTGAAGGAGACACTGTCGCAGGCACAGTCACTTTCACTTTGAAGAAAGAAACCAAAGTGAAGAGTGTGATGGTGAAAGCCAAAGGGGACGCGTACGTAGACTGGACAGAAGACAAAGGAGGCGACGGCCCATCTTACAAAGCCCACAGGAGATACTTCAAACTAAAAGAGTACTTAGTTGCAGAAAGTTCCGAAGGCACTGTTCTTCCCCAAGGAGTCCATTGCATTAAGTTCAGATTTAAAATTCCACAGGGagATATGCCATCATCCTTCAAGGGGATTCATGGAAAGGTTGTCTACATGCTTGAAGCCAAGGTGTCCAGGGGCTGGCTGAGGCGTTCTCAAGTACAAACAGAGTTCAATTTTGTTTCAAAGTCCCTTTCACACCTTGGCCATGGAATGCGTCCCCAGTCTGGTTCAGTGGCTAAAGAAATCGGGGTTTTCTCCAAAGGACAGGTCCAACTGTCTGCTACCGTTAACACAAAGGTTTGCTCTCCAGGTGACACTGTATCTGTTGTTGCCAAGATTTGCAACTCCTCTTCCAAAAAAGTGAAGCCCAAATTCCGTTTACAGCAGAAAACAGTGTACCGCGCCAGTGGCTCCACCAATTCTCGTGACCAAACTCTATGCAAAATAGTTGGAGAGACTATCGCACTGAACTCAGAGGAAACTGTCTCCTGCCAATTGAAGATTCCTGCCGATGCCATTCCCACACTCCATCATTGTGAAATCATCTCAGTTGACCATTACCTCAAGgtgtatTGGACCATCAGTTTTGCCATTGACCCAGAGGTGGTGTTTCCACTGGTCATCGTTACTTCTAGCTTTGCCCGCCCTTACCTTGGTGAGGCTGTGGGGCCTTACCCAGCTGGGGCCCCAAGTTACAGCGACTTCCCTCCCCCTGCTTTCCCTATTGGTCCTTATCCTGTACCTGCAGGTCCAGGTGCTTATGGGTACCCAGCGCCAGATCCCACTCAAAATGGAACCATAAGTGGCTGTAATAATCAGTGGCCACAACAGGCCCCTTCATGTGGTTTTTCAACTACAGCTTCATCTTTAATGCAGCAACAAGCCCCTACTGCTCCGCCTCTAGTTCAACAGGGAGAAGATCCTCCCTCTTATATGTCCCTTTTTTACCCTTCTCAGGACACTCTCAGTAGCACTGGGTCAGAGCACAAAAGCTGAGCTTCAAAAAGAACACTAACCTCCCTCCAGATTGTTTAGAATCGGCCTGAAAGACATaccaaattgttggaaatgtaagacagaggACAGCTAACtacttcatgtcctatggtcctgtgataaggtccagggATTTTGGactgggaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804483.1 True 1467 mRNA 0.47 6 16487394 16492635

Neighbor

gene id symbol gene type direction distance location
LOC120561386 NA coding upstream 3365 16477498 ~ 16484029 (+)
LOC120561380 NA coding upstream 19418 16461238 ~ 16467976 (+)
kiaa0825 kiaa0825 coding upstream 548541 15811685 ~ 15938853 (+)
trnac-gca_21 NA coding upstream 868250 15619073 ~ 15619144 (+)
trnac-gca_20 NA coding upstream 868579 15618744 ~ 15618815 (+)
LOC120561368 LOC104951926 coding downstream 2600 16495235 ~ 16504736 (+)
LOC120560896 LOC103362386,LOC102790232,LOC102295658,LOC102208013 coding downstream 44491 16537126 ~ 16540185 (+)
wdr54 wdr54 coding downstream 57615 16550250 ~ 16554512 (+)
rhobtb4 LOC103362416,LOC103470451 coding downstream 79693 16572328 ~ 16616256 (+)
si:dkey-40c11.2 LOC104955420,LOC104955419 coding downstream 135886 16628521 ~ 16663697 (+)
G61975 NA non-coding upstream 288523 16123200 ~ 16198871 (+)
LOC120560394 NA non-coding upstream 344595 16134594 ~ 16142799 (+)
G61968 NA non-coding upstream 430689 16035451 ~ 16056705 (+)
G61970 NA non-coding upstream 436701 16048383 ~ 16050693 (+)
G61966 NA non-coding upstream 441556 15961601 ~ 16045838 (+)
G62033 aqp3,LOC103362379,LOC107393848,LOC105031174 non-coding downstream 19536 16512171 ~ 16514043 (+)
G62082 NA non-coding downstream 74847 16567482 ~ 16567714 (+)
G62085 NA non-coding downstream 117842 16610477 ~ 16620136 (+)
LOC120560795 NA non-coding downstream 403953 16896588 ~ 16943176 (+)
G62126 NA non-coding downstream 460290 16952925 ~ 16953637 (+)
LOC120560890 NA other upstream 11489 16468310 ~ 16475905 (+)
fam172a fam172a,LOC102785942 other upstream 387910 15943698 ~ 16099484 (+)
mctp1a mctp1,LOC102782783 other upstream 710253 15636798 ~ 15777141 (+)
LOC120560526 NA other upstream 954598 15518780 ~ 15532796 (+)
zgc:101664 NA other upstream 1052459 15431708 ~ 15434935 (+)
LOC120560897 LOC105925468 other downstream 40281 16532916 ~ 16534175 (+)
LOC120560947 edil3 other downstream 793013 17285648 ~ 17414595 (+)
tmem167a tmem167a,LOC103397084 other downstream 1075378 17568013 ~ 17572705 (+)
cmya5 cmya5,LOC106958347,LOC104953151 other downstream 1506051 17998686 ~ 18011030 (+)
thbs4a thbs4,LOC104953147,LOC106958346 other downstream 1522770 18015405 ~ 18029386 (+)

Expression


Co-expression Network