LOC120561433 (ppic)


Basic Information

Item Value
gene id LOC120561433
gene name ppic
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 35675371 ~ 35683544 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804555.1
GAGTGGTCTGTTGATGTGGCCGAGTTTGGAGCGCTGTATCACGGCCAGCCTCCCAGCTGTGACTCGCTgtcatttccttttcttcttcttcttctccccccgccgacccccccccccccctcgccgTTACTCCCAGCAGGGCCCCGGCTGCCGCCGCTGTCTCCCGTAAAGATGGAGCTCCGGACGATCATACCcgctctgctcttcctctctgccgCCTGTCTGCAGTCGGTGTCCGGCGCGGCATCACGGAGAGGACCGAAAGTCACCGAGAAGGTGTTTTTTGACATCACAGTGGCAGGTCACGAGGTGGGGCGGATCGTCTTCGGCCTTTTTGGGGAGGTTGTCCCACTCACTGTCAATAACTTTGTCGCCCTGGCAACTGGAGAGAAAGGTTACGGCTACAAAGGGACAAAGTTCCACAGAGTCATCAAGGACTTCATGATCCAGGGAGGAGACTTTACAGCTGAAGATGGAACTGGAGGTCACAGCATCTATGGAACAACTTTTGCTGATGAAAACTTCAAACTGAAGCATTTAGGAGCCGGCTGGGTGAGTATGGCGAATGCCGGTCCGGACACCAACGGATCGCAGTTCTTCATCCTGGCTGCCAAAGCACCGTGGCTGGATGGGAAACACGTGGTttttggcaaagtcctggatggGATGTCCGTGGTTCACACCATCGAGCTCCAGGACACCAACGACAGGAACCTGCCGTACACCGAGTGTGTGATCGTCAACAGCGGCAGGATCCCCGTCAAAGAGCCCTTcgtggtggaggtggagggcTGGTAGACGCCACTGTTAGACGGTTTACTGTAGAGCAAGGACACTGTGATTATTAAATTCTGGTGAGCAATCAGAAGTCCAGTTTGCCAAATTCACATTCTCATATTATCACTTTTGCATGTTAACGTGCTGACACCAATATGCTAGCAACTAGGGCTGAGTAtttgtttgaaatgttttgatTCTCTATGCTCAGGTGAAAACCTTATATCTCCAAAATGGCCACTTTTTTAGGATTGCCACGTTTTGAACTAGATTCAATTTCGACGACCGAGCAACTTTAGAATCAGCAGATTtgggctttttctttttttattttacaaccaaaagattttaaaaagatTCATGAGCCTTAAGCCATGCTTTTAGTTGTATAGATCTAGTGAGAAAGTCTCTAAGATGGCAACACtgatctgtttatttattcGTAACGTACCCTTTGTAAAAGGACGTGTCATAGATGAGCATGTGAAACAAACGCCAAAACACACTATATGCAGAGAGAATTCATCAAGTTTACTGTGGTTCATGCTAACTTTTTTATGTTAGCTGGCATACTTGCATATTTAGTGGATGGTGCCAGTTAGCATCCTCCCTAAAATTCTGTATCAAACTAAATAATGAACTGTGCTTTAAACATGACAAACACCATGGAAACTTGAATTTACAGAACTATGTAGCTCCTCTTTTAATCTCTAATTGCCAAAATCATTCTCTGTTTGCCATTTGCTTGCATTTTCTATGCAACTAATCGATACTTAAATATCTTCATTTCAATTACTGTTAACAAACATATGCAAAAAAGTGTAGCAAGTGTCAAACGCCATTCTTGCACTTTATCTTTACATCGTTGAAAATGAAGATTTCCTTTCTCCTGTTTTCATTAAATGGAGATATTGTCTTCCTGATGCTTTATGAACCATATCATGTTTGCAAAAACTACAGCACAAATTGCACAGGAAGGAAAATTAAGTGTGGAAGTGTGTATTAATACTGTAGCTGTCCCCTCAGTAATGATTTAAATGCTGAGGTGTGTTATATCTGTCTGACTATGACCAGATCAGTAAACTAATTCTGACTGTAAATGTcatttgttattgttcttttaatGTTGTGGTTGCGATTTCTGTTAAAACCGAAACTGTCACGGTAGCGTAATAATCCAGGAAGGTTATGACTGATAATCTTCACGTCGCTCAAGTAAATGCAGCATTTAAAACCTCTTCAACAAACATATCAGgagttttgttttcattatttataGTAACAGCAGAAGAAGAGTGCCAACATGTGTGTTTTATACAATAAACAATATGCTGTTACAAACAAA

Function

symbol description
ppic Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to act upstream of or within protein folding and protein peptidyl-prolyl isomerization.

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase C

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K09563 PPIC, CYPC; peptidyl-prolyl isomerase C (cyclophilin C)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804555.1 True 2122 mRNA 0.43 6 35675371 35683544

Neighbor

gene id symbol gene type direction distance location
LOC120560626 NA coding upstream 55505 35613850 ~ 35619866 (+)
LOC120560627 NA coding upstream 63389 35607468 ~ 35611982 (+)
LOC120560628 NA coding upstream 72034 35596806 ~ 35603337 (+)
znf608 znf608,LOC102795784 coding upstream 153259 35463291 ~ 35522112 (+)
LOC120560914 NA coding upstream 280872 35380725 ~ 35394499 (+)
rnf214 LOC104937101,LOC104945828,LOC102078715,LOC101469573,LOC102289946,LOC102794451,LOC102193077,LOC104967173 coding downstream 105547 35789091 ~ 35796234 (+)
LOC120561090 NA coding downstream 343766 36027310 ~ 36035340 (+)
trnai-aau_2 NA coding downstream 477854 36161398 ~ 36161471 (+)
trnaf-gaa_4 NA coding downstream 492935 36176479 ~ 36176551 (+)
cemip2 tmem2 coding downstream 494685 36178229 ~ 36217618 (+)
G66997 NA non-coding upstream 257564 35388776 ~ 35417807 (+)
LOC120561203 NA non-coding upstream 417299 35255661 ~ 35258072 (+)
G66907 NA non-coding upstream 673175 35000278 ~ 35002196 (+)
G66834 NA non-coding upstream 845717 34828892 ~ 34829654 (+)
G66830 NA non-coding upstream 859044 34815589 ~ 34816327 (+)
LOC120560688 NA non-coding downstream 211607 35895151 ~ 35898183 (+)
G67202 NA non-coding downstream 372140 36055684 ~ 36059486 (+)
G67216 NA non-coding downstream 411271 36094815 ~ 36096123 (+)
G67219 NA non-coding downstream 437351 36120895 ~ 36128995 (+)
G67263 NA non-coding downstream 574162 36257706 ~ 36257913 (+)
LOC120560625 cep120 other upstream 126140 35522665 ~ 35549231 (+)
LOC120561428 fam163b,LOC103374717,LOC102797860,LOC101061299,LOC102298266,LOC101485828,LOC104964271,LOC102215914 other upstream 615740 35046844 ~ 35059631 (+)
G66832 NA other upstream 810681 34861499 ~ 34864690 (+)
LOC120561070 NA other upstream 901565 34765930 ~ 34773806 (+)
cfap157 NA other upstream 1147966 34514010 ~ 34527405 (+)
G67146 NA other downstream 157330 35840874 ~ 35852056 (+)
G67145 NA other downstream 157990 35841534 ~ 35854161 (+)
G67152 NA other downstream 187879 35871423 ~ 36023264 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other downstream 558035 36241579 ~ 36492695 (+)
LOC120560081 NA other downstream 794254 36477798 ~ 36481311 (+)

Expression


Co-expression Network