gadd45ga (gadd45g)


Basic Information

Item Value
gene id gadd45ga
gene name gadd45g
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 24213241 ~ 24215089 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804577.1
CAAGAAAGATTGTAATCTTGCCCCACGTGGGGTTGTCAACATGCTCAGCGTAACTGCCCGGGGACTTTTGCTTTCCTCATCACGACTGCTCTGAGCCAATGGTAGGAGGCATGAGCGGAAAAGACCGCCCATGCCGAGAAACTACGCTGATCTGCTATAAATCCACCCACAGACTGTTCCGAGCTCAGAATAACGCAAGAGACTACATAGAGAACTACacagccttttctgttcactgcAAAAATCTCGATCGCGCTTGGATTATAACTATGACTCTGGAAGAGATCCGCGGACAAGAGAACACAATGGAAAACGCAGATAGgGTGCAAAGTGCAGGCGCAGCCCTGGAAGAGCTGCTGGTCGCTGCTAAGAAGCAGGATTACCTGACAGTTGGAGTTTATGAATCTGCTAAAGTCATGAATGTTGACCCAGACAGCGTGGCATTCTGCGTCCTCGCCACCGATGAGGAGTACGAATGTGACATTGCTCTCCAGATCCACTTCACCCTCATCCAGGCGTTCTGCTTCGATAACGACATCAACGTGGTGCGCGTCAATGACATCGAGCGCCTGGCCGACCTCGTGAGCGCAGACGAGACCGGCGAGCCCAAGGACGCGCACTGCATTCTTGTCACGagcCCCAGTGCAAACCCATGGAAAGACCCGGCTCTGGACAAGTTGAGCCTGTTCTGTGAGGAGAGCCGCAGTGTGTACGACTGGGTGCCCACCATCACGCTCCCAGAGCGCTGAAGTGACATCCCACTAACAATGCTtcacatgatgatgatgaagatgatgaaaaGAAAGTCAAGGAGCTGAGCCTCAGTTGGGGTTGTGAAGCCTTTCTGCCTCACTTTCTGGATTAAGGGGCTGTGGCTGTAACCCCCTGCAAGAGCACAACCTACCAGTGCATTCTGGGTCAGCACGTTGGTTCTGGATTACCCTGAGGAAGGGTTCAAGTTCAGAAGTCAAGTGCAGACTGGGTCAGGTGAATGTGGAATGGACAGAAAGCCTGATGGACACAGAAGGATTTGGAATGTACTGCAAAGTGCATGAATAGACGAGAAGTGGCGTCCCTGCTGCTGCCCTAGTTAAAAGGCAATGGGGAACTGAGCGGAGCAGGTCACAGAGACCTTGCAAGAAATGGACTTGTGAAAGTGCAGAGGCTGGACTGAATCTCATCAGAGGGTAACAAGGAAGATGCTGGTTCAGAAGAAGGTGTCTGAAATGTCTAAATGGActtaacttttctttttacagtgCAGCTATCAGGAAGTTCTTGGAATAAGCAGAGACTTTGCTTGTAAATCCTGATTTGAGCTGTGTCTGAACCTGTGACACTTTCTCATggactattattattactttgaaATATGCAGACAAATATGCAATATTGTTTGAATTGTAcacatttttaatgttttgtgaatAAACATTTGAAATCAA

Function

symbol description
gadd45g Predicted to enable identical protein binding activity. Involved in positive regulation of JNK cascade; positive regulation of apoptotic process; and positive regulation of p38MAPK cascade. Located in cytoplasm and nucleus.

NR:

description
growth arrest and DNA damage-inducible protein GADD45 gamma-like

GO:

id name namespace
GO:0051726 regulation of cell cycle biological_process
GO:0006950 response to stress biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K04402 GADD45; growth arrest and DNA-damage-inducible protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804577.1 True 1445 mRNA 0.49 4 24213241 24215089

Neighbor

gene id symbol gene type direction distance location
creb3l3l LOC103366202,LOC104958765 coding upstream 2799 24203522 ~ 24210442 (+)
nim1ka nim1k coding upstream 10257 24181917 ~ 24202984 (+)
znf131 znf131,LOC102798529 coding upstream 31430 24174441 ~ 24181811 (+)
ghra LOC103366197 coding upstream 50771 24126863 ~ 24162470 (+)
fbxo4 fbxo4,LOC102798721 coding upstream 96058 24110320 ~ 24117183 (+)
znf367 znf367,LOC102779640 coding downstream 628617 24843706 ~ 24849355 (+)
smyd1b smyd1,LOC107394125,LOC100708974 coding downstream 679973 24895062 ~ 24901099 (+)
znf366 znf366 coding downstream 709440 24924529 ~ 24932594 (+)
mrps27 mrps27,LOC106943511 coding downstream 720571 24935660 ~ 24948527 (+)
ptger4a LOC103360740,LOC104967800 coding downstream 743073 24958162 ~ 24962478 (+)
G64200 NA non-coding upstream 43713 24164677 ~ 24169528 (+)
G64188 NA non-coding upstream 108889 24101506 ~ 24104352 (+)
G64183 NA non-coding upstream 154480 24049968 ~ 24058761 (+)
G64172 NA non-coding upstream 196173 24015078 ~ 24017068 (+)
G64130 NA non-coding upstream 463406 23744939 ~ 23749835 (+)
G64235 NA non-coding downstream 19185 24234274 ~ 24234488 (+)
G64251 NA non-coding downstream 147386 24362475 ~ 24362909 (+)
LOC120560123 NA non-coding downstream 299730 24514819 ~ 24518873 (+)
G64279 NA non-coding downstream 645160 24860249 ~ 24862730 (+)
G64287 NA non-coding downstream 661473 24876562 ~ 24892517 (+)
G64108 NA other upstream 519950 23692662 ~ 23693291 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other upstream 650956 23487967 ~ 23562285 (+)
G63905 NA other upstream 1283036 22929899 ~ 22930205 (+)
LOC120560787 NA other upstream 2613952 21588876 ~ 21599289 (+)
G63480 rbm19 other upstream 3535325 20676417 ~ 20677916 (+)
prxl2c aaed1 other downstream 606225 24821314 ~ 24823066 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other downstream 608629 24823718 ~ 24837448 (+)
LOC120561182 LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747 other downstream 1469875 25684964 ~ 25696576 (+)
LOC120560031 LOC104941040,LOC103357154,LOC102795853 other downstream 1699190 25914279 ~ 25915577 (+)
LOC120560359 NA other downstream 1710998 25926087 ~ 25928596 (+)

Expression


Co-expression Network