ptgs1 (LOC103362336)


Basic Information

Item Value
gene id ptgs1
gene name LOC103362336
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 29203493 ~ 29214795 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804594.1
ACCACCCATTCGTGTTATAGATGTTAGTAGCAGGCCTATGGGTTGTTGTGCAGAAAGTAGCCAACCCATGTGTCTGAAATTACTTTTGAGAAACAGAAGAACACTGTTAACCAAAACTTTTTAAATTTGAGCCCTCACAGAACGACCCAGGTGTGGAAATCATGAAAGAGTTTAGGATCTTCTCCATCTGGTTTTTCAACCTGTTGCTGCTGGAGAGCTCATCATGTGCTGGTGACTCAAGTGTTGTGAATCCCTGTTGTTACTACCCTTGTCAGAAcgtaggagtgtgtgtgagatttgGTGCAGACCGCTACGAATGTGACTGCACTCGCACAGGCTTCTATGGAGACAACTGTACTGTTCCGGAGCTCTGGACCAGAGTTCGTCTCATGCTGAAGCCGAGGCCTGCGACGGTTCACTTTATCCTCACCCACTTCCAGTGGTTCTGGGACATCGTCAACAGCTCTTTCCTGCGTGGCACATTCATGAGATTAGTGCTGACGGTCAGAAGCGACCTTATTCCAAGCCCTCCAACCTACAATTCTAAATATGGATACCTCAATTGGGAGTCCTACTACAACATCTCCTACTACACCCGTCTCCTCCCTCCTGTACCTGAAGACTGCCCTTTGCCGATGGGAACTAAAGGTAAACCTGATCTTCCTGATCCCAAAGTGTTGGCCGAGAGGTTTTTTAAGAGAAAGAAATTCAGGCCAGATCCTCAGGGAACCAACCTGATGTTTGCCTTCATGGCCCAACACTTCACCCACCAGTTTTTCAAGACAAACAAGGAAGTTGAAGATGGTTTCACTAAGGCTTTAGGCCATGGGGTAGATGCGAGCAATATCTATGGAGACAACCTGATACGACAGCTTCAACTCCGGCTTCATCAAGATGGAAAGCTAAAATATCAGTTGATACATGGTGAGATGTACCCccctactgtatctgatgtcccTGTGCACATGGTGTATCCTGAACACTTCCCCCCAGAGAAGCGTCTGGTCACTGGTCATGAGGTATTTGGCCTCCTGCCGGGCCTCACCATGTACGCCACCATATGGCTGAGGGAGCATAACAGAGTCTGTGACATCCTGAAGGCAGaacatcccacctgggacgatGAGCAGCTCTTCCAGACCACCAGACTCATCATGATTGGAGAGATCCTCAACATTATAATCGAAGAGTACGTGCAGCATCTGAGTGGTTACCTGCTGAAACTGAAATTTGATCCCGCCCTGCTCTTCAGCGTACGTTTCCAGTACAGCAACCGCATCGCTCTGGAGTTCTGCCACCTCTACCACTGGCATCCACTGATGCCTGACAGCTTCCTCATCGACGGAGATGAAATCCCATACTCCCAGTTTATTTACAACACCTCCCTCATCATGCACTATGGGGTGGAGAAACTAGTGGATGCCTTCTCccaacaacctgcaggacagATAGGTGGAGGTCGCAACTCTCATGCGGTAGTGCTCAAAGTGGCAGAAATGGTCATCAGAGAGTCTCGAGCAACACGTGTGCAGCCCTTTAATGAATACAGGAAGAAGTTTAACCTGAAGCCATACACATCTTTTTATGAATTTACTGATGACATAGAGATGGCCAGAGGTTTAGAGGAGCTCTATGGTGACATAGATGCTCTGGAGCTCTACCCCGGCGTCCTGCTGGAGAAAACCCGTCCTAACAGCCTATTTGGTGAGAGTATGGTGGAGATGGGTGCTCCATTTTCCCTGAAAGGCCTGCTGGGAAACCCCATCTGCTCCCCTGAGTACTGGAAGCCCAGCACCTTTGGGGGAGAGACGGGCTTCAATATCGTCAAAACTTCCACTCTGAAGAAACTGGTGTGCCTCAACACCAAGTGGTGTCCATACGTGGACTTTCATGTTCCACGAAAAGAGGAGGACACAAAACCAAGAAAATCACCCACTGAACTTTAATGAGTATTTCATTAATCACAATCAGTTTATTACTATACTGACTGTGGGAGACATAGTAGTTGTCAATGTGTTGTAAATTCTTGTCATATTCTCATTCAGACCATATGTATTGCTGTTGGGGAGAAAGGGTGACTTTTATACTACATGTGCTAATGCAGTGGTTTTATTCCTGGCTTCAGTGAATGACATACTCTGCATTTAAGCAGGTCTACCTCCAAAAAATACAGCTGACAAATTCTATAGTTTCCGGAGAATGAAAATTCCTCTAGACCTCGGAGAAGTATTTTAATTTGCTAATGATGAAACTCAGTATAACTTTTTTGtttgggtttttgttttttcccctcttcttTTCAGAGTAAAGGTATTGTATCACTATATCTTCTTGAATACCAACAATTAAATTACGTTACTGTACAGATGACCTGTTCAAAGAAGAGAATGAATACACTGTATTTTAAATtgccaaaaataaaagtaagaaATAGTTCATGAATTATAAGTAATGATCTGCAGACAGTTATTATTGTTGCATATTAGAAGAAACCCATGTCATTTAGGTCAAAATTACATTCAATCAATGTTTATAATCTgtacaaaagaaaatgttgcaattcaaaaataaaagttgGCCACTA
>XM_039804595.1
GGCAAATCCAGGccgaaaaagaaaataaagaaaagttcAGTCATTTATTGAAGAAACGAAAACCTTTTATACTGTCTACGGTGAAAACACATACGCTTACAGGCAGGTAGAGGTACATTTCCCACATTTCAGGGTTAAGAGAAAGCAAGGCACGAAGCAACATTGACAATCATGCAGGGCTGATGAGGGAAAGTGGAAACAGGTGAGCAGGTGGATGTGAGACACAGGGACAGGTGGGAGAGTCTGAGGGTatctggtggatggatggaaaatgGCAGTTCCATGGCCTGGGAGAAGTGAGAAGCTTGAATCCCTGTTGTTACTACCCTTGTCAGAAcgtaggagtgtgtgtgagatttgGTGCAGACCGCTACGAATGTGACTGCACTCGCACAGGCTTCTATGGAGACAACTGTACTGTTCCGGAGCTCTGGACCAGAGTTCGTCTCATGCTGAAGCCGAGGCCTGCGACGGTTCACTTTATCCTCACCCACTTCCAGTGGTTCTGGGACATCGTCAACAGCTCTTTCCTGCGTGGCACATTCATGAGATTAGTGCTGACGGTCAGAAGCGACCTTATTCCAAGCCCTCCAACCTACAATTCTAAATATGGATACCTCAATTGGGAGTCCTACTACAACATCTCCTACTACACCCGTCTCCTCCCTCCTGTACCTGAAGACTGCCCTTTGCCGATGGGAACTAAAGGTAAACCTGATCTTCCTGATCCCAAAGTGTTGGCCGAGAGGTTTTTTAAGAGAAAGAAATTCAGGCCAGATCCTCAGGGAACCAACCTGATGTTTGCCTTCATGGCCCAACACTTCACCCACCAGTTTTTCAAGACAAACAAGGAAGTTGAAGATGGTTTCACTAAGGCTTTAGGCCATGGGGTAGATGCGAGCAATATCTATGGAGACAACCTGATACGACAGCTTCAACTCCGGCTTCATCAAGATGGAAAGCTAAAATATCAGTTGATACATGGTGAGATGTACCCccctactgtatctgatgtcccTGTGCACATGGTGTATCCTGAACACTTCCCCCCAGAGAAGCGTCTGGTCACTGGTCATGAGGTATTTGGCCTCCTGCCGGGCCTCACCATGTACGCCACCATATGGCTGAGGGAGCATAACAGAGTCTGTGACATCCTGAAGGCAGaacatcccacctgggacgatGAGCAGCTCTTCCAGACCACCAGACTCATCATGATTGGAGAGATCCTCAACATTATAATCGAAGAGTACGTGCAGCATCTGAGTGGTTACCTGCTGAAACTGAAATTTGATCCCGCCCTGCTCTTCAGCGTACGTTTCCAGTACAGCAACCGCATCGCTCTGGAGTTCTGCCACCTCTACCACTGGCATCCACTGATGCCTGACAGCTTCCTCATCGACGGAGATGAAATCCCATACTCCCAGTTTATTTACAACACCTCCCTCATCATGCACTATGGGGTGGAGAAACTAGTGGATGCCTTCTCccaacaacctgcaggacagATAGGTGGAGGTCGCAACTCTCATGCGGTAGTGCTCAAAGTGGCAGAAATGGTCATCAGAGAGTCTCGAGCAACACGTGTGCAGCCCTTTAATGAATACAGGAAGAAGTTTAACCTGAAGCCATACACATCTTTTTATGAATTTACTGATGACATAGAGATGGCCAGAGGTTTAGAGGAGCTCTATGGTGACATAGATGCTCTGGAGCTCTACCCCGGCGTCCTGCTGGAGAAAACCCGTCCTAACAGCCTATTTGGTGAGAGTATGGTGGAGATGGGTGCTCCATTTTCCCTGAAAGGCCTGCTGGGAAACCCCATCTGCTCCCCTGAGTACTGGAAGCCCAGCACCTTTGGGGGAGAGACGGGCTTCAATATCGTCAAAACTTCCACTCTGAAGAAACTGGTGTGCCTCAACACCAAGTGGTGTCCATACGTGGACTTTCATGTTCCACGAAAAGAGGAGGACACAAAACCAAGAAAATCACCCACTGAACTTTAATGAGTATTTCATTAATCACAATCAGTTTATTACTATACTGACTGTGGGAGACATAGTAGTTGTCAATGTGTTGTAAATTCTTGTCATATTCTCATTCAGACCATATGTATTGCTGTTGGGGAGAAAGGGTGACTTTTATACTACATGTGCTAATGCAGTGGTTTTATTCCTGGCTTCAGTGAATGACATACTCTGCATTTAAGCAGGTCTACCTCCAAAAAATACAGCTGACAAATTCTATAGTTTCCGGAGAATGAAAATTCCTCTAGACCTCGGAGAAGTATTTTAATTTGCTAATGATGAAACTCAGTATAACTTTTTTGtttgggtttttgttttttcccctcttcttTTCAGAGTAAAGGTATTGTATCACTATATCTTCTTGAATACCAACAATTAAATTACGTTACTGTACAGATGACCTGTTCAAAGAAGAGAATGAATACACTGTATTTTAAATtgccaaaaataaaagtaagaaATAGTTCATGAATTATAAGTAATGATCTGCAGACAGTTATTATTGTTGCATATTAGAAGAAACCCATGTCATTTAGGTCAAAATTACATTCAATCAATGTTTATAATCTgtacaaaagaaaatgttgcaattcaaaaataaaagttgGCCACTA
>XM_039804596.1
GGCAAATCCAGGccgaaaaagaaaataaagaaaagttcAGTCATTTATTGAAGAAACGAAAACCTTTTATACTGTCTACGGTGAAAACACATACGCTTACAGGCAGGTAGAGGTACATTTCCCACATTTCAGGGTTAAGAGAAAGCAAGGCACGAAGCAACATTGACAATCATGCAGGGCTGATGAGGGAAAGTGGAAACAGGTGAGCAGGTGGATGTGAGACACAGGGACAGGTGGGAGAGTCTGAGGGTatctggtggatggatggaaaatgGCAGTTCCATGGCCTGGGAGAATGAATCCCTGTTGTTACTACCCTTGTCAGAAcgtaggagtgtgtgtgagatttgGTGCAGACCGCTACGAATGTGACTGCACTCGCACAGGCTTCTATGGAGACAACTGTACTGTTCCGGAGCTCTGGACCAGAGTTCGTCTCATGCTGAAGCCGAGGCCTGCGACGGTTCACTTTATCCTCACCCACTTCCAGTGGTTCTGGGACATCGTCAACAGCTCTTTCCTGCGTGGCACATTCATGAGATTAGTGCTGACGGTCAGAAGCGACCTTATTCCAAGCCCTCCAACCTACAATTCTAAATATGGATACCTCAATTGGGAGTCCTACTACAACATCTCCTACTACACCCGTCTCCTCCCTCCTGTACCTGAAGACTGCCCTTTGCCGATGGGAACTAAAGGTAAACCTGATCTTCCTGATCCCAAAGTGTTGGCCGAGAGGTTTTTTAAGAGAAAGAAATTCAGGCCAGATCCTCAGGGAACCAACCTGATGTTTGCCTTCATGGCCCAACACTTCACCCACCAGTTTTTCAAGACAAACAAGGAAGTTGAAGATGGTTTCACTAAGGCTTTAGGCCATGGGGTAGATGCGAGCAATATCTATGGAGACAACCTGATACGACAGCTTCAACTCCGGCTTCATCAAGATGGAAAGCTAAAATATCAGTTGATACATGGTGAGATGTACCCccctactgtatctgatgtcccTGTGCACATGGTGTATCCTGAACACTTCCCCCCAGAGAAGCGTCTGGTCACTGGTCATGAGGTATTTGGCCTCCTGCCGGGCCTCACCATGTACGCCACCATATGGCTGAGGGAGCATAACAGAGTCTGTGACATCCTGAAGGCAGaacatcccacctgggacgatGAGCAGCTCTTCCAGACCACCAGACTCATCATGATTGGAGAGATCCTCAACATTATAATCGAAGAGTACGTGCAGCATCTGAGTGGTTACCTGCTGAAACTGAAATTTGATCCCGCCCTGCTCTTCAGCGTACGTTTCCAGTACAGCAACCGCATCGCTCTGGAGTTCTGCCACCTCTACCACTGGCATCCACTGATGCCTGACAGCTTCCTCATCGACGGAGATGAAATCCCATACTCCCAGTTTATTTACAACACCTCCCTCATCATGCACTATGGGGTGGAGAAACTAGTGGATGCCTTCTCccaacaacctgcaggacagATAGGTGGAGGTCGCAACTCTCATGCGGTAGTGCTCAAAGTGGCAGAAATGGTCATCAGAGAGTCTCGAGCAACACGTGTGCAGCCCTTTAATGAATACAGGAAGAAGTTTAACCTGAAGCCATACACATCTTTTTATGAATTTACTGATGACATAGAGATGGCCAGAGGTTTAGAGGAGCTCTATGGTGACATAGATGCTCTGGAGCTCTACCCCGGCGTCCTGCTGGAGAAAACCCGTCCTAACAGCCTATTTGGTGAGAGTATGGTGGAGATGGGTGCTCCATTTTCCCTGAAAGGCCTGCTGGGAAACCCCATCTGCTCCCCTGAGTACTGGAAGCCCAGCACCTTTGGGGGAGAGACGGGCTTCAATATCGTCAAAACTTCCACTCTGAAGAAACTGGTGTGCCTCAACACCAAGTGGTGTCCATACGTGGACTTTCATGTTCCACGAAAAGAGGAGGACACAAAACCAAGAAAATCACCCACTGAACTTTAATGAGTATTTCATTAATCACAATCAGTTTATTACTATACTGACTGTGGGAGACATAGTAGTTGTCAATGTGTTGTAAATTCTTGTCATATTCTCATTCAGACCATATGTATTGCTGTTGGGGAGAAAGGGTGACTTTTATACTACATGTGCTAATGCAGTGGTTTTATTCCTGGCTTCAGTGAATGACATACTCTGCATTTAAGCAGGTCTACCTCCAAAAAATACAGCTGACAAATTCTATAGTTTCCGGAGAATGAAAATTCCTCTAGACCTCGGAGAAGTATTTTAATTTGCTAATGATGAAACTCAGTATAACTTTTTTGtttgggtttttgttttttcccctcttcttTTCAGAGTAAAGGTATTGTATCACTATATCTTCTTGAATACCAACAATTAAATTACGTTACTGTACAGATGACCTGTTCAAAGAAGAGAATGAATACACTGTATTTTAAATtgccaaaaataaaagtaagaaATAGTTCATGAATTATAAGTAATGATCTGCAGACAGTTATTATTGTTGCATATTAGAAGAAACCCATGTCATTTAGGTCAAAATTACATTCAATCAATGTTTATAATCTgtacaaaagaaaatgttgcaattcaaaaataaaagttgGCCACTA

Function

NR:

description
prostaglandin G/H synthase 1-like isoform X1

GO:

id name namespace
GO:0006979 response to oxidative stress biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0004601 peroxidase activity molecular_function
GO:0020037 heme binding molecular_function

KEGG:

id description
K00509 PTGS1, COX1; prostaglandin-endoperoxide synthase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804594.1 False 2584 mRNA 0.44 11 29203493 29214795
XM_039804595.1 True 2644 mRNA 0.45 10 29204121 29214795
XM_039804596.1 False 2634 mRNA 0.45 10 29204121 29214795

Neighbor

gene id symbol gene type direction distance location
zgc:152968 NA coding upstream 131326 29060747 ~ 29072167 (+)
LOC120560378 st8sia3,LOC104919001,LOC100693561,LOC102785111,LOC102199258,LOC101477372 coding upstream 153269 29041940 ~ 29050224 (+)
LOC120560871 ccng2,LOC102294549,LOC100696397,LOC102783398 coding upstream 162664 29036015 ~ 29040829 (+)
zgc:158260 NA coding upstream 186568 29013606 ~ 29016925 (+)
LOC120560307 LOC103366435,LOC100706955,LOC101475748 coding upstream 224007 28963413 ~ 28979486 (+)
LOC120561007 NA coding downstream 6059 29220854 ~ 29223680 (+)
pmpca pmpca coding downstream 27927 29242722 ~ 29248901 (+)
LOC120560903 LOC103397900,LOC107386316,LOC108233556,LOC101070320,LOC106510880,LOC100705620,LOC101474073 coding downstream 44123 29258918 ~ 29260327 (+)
LOC120560594 LOC103353434 coding downstream 82327 29297122 ~ 29343400 (+)
camsap1b camsap1 coding downstream 139325 29354120 ~ 29382295 (+)
LOC120560778 NA non-coding upstream 72277 29072941 ~ 29131216 (+)
G65570 NA non-coding upstream 97884 29103988 ~ 29105609 (+)
G65565 LOC108233773,LOC103375797 non-coding upstream 105180 29078426 ~ 29098313 (+)
G65473 NA non-coding upstream 201313 28985613 ~ 29002180 (+)
G65418 NA non-coding upstream 387093 28816185 ~ 28816400 (+)
G65710 NA non-coding downstream 332654 29547449 ~ 29614880 (+)
G65713 NA non-coding downstream 374212 29589007 ~ 29591364 (+)
G65734 NA non-coding downstream 556844 29771639 ~ 29771864 (+)
G65738 NA non-coding downstream 597177 29811972 ~ 29812218 (+)
G65745 NA non-coding downstream 721098 29935893 ~ 29936995 (+)
mboat4 NA other upstream 354022 28845626 ~ 28849471 (+)
G65084 lipg other upstream 1832534 27205234 ~ 27370959 (+)
ndufs4 ndufs4 other upstream 2163894 27012210 ~ 27039599 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other upstream 2541598 26644661 ~ 26661895 (+)
cltcl1 LOC100691387,LOC103359525 other upstream 2559326 26614237 ~ 26644167 (+)
ubac1 ubac1 other downstream 129785 29344580 ~ 29351756 (+)
fbxo21 fbxo21 other downstream 972053 30186848 ~ 30212108 (+)
LOC120560820 NA other downstream 1032092 30246887 ~ 30251519 (+)
G65899 taok3 other downstream 1359291 30574086 ~ 30578159 (+)
LOC120561064 NA other downstream 1642785 30857580 ~ 30893280 (+)

Expression


Co-expression Network