cmklr1


Basic Information

Item Value
gene id cmklr1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 19120145 ~ 19122475 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804624.1
ATAGGTTGTGCAGTGTTTCTAACAAGTCTAAAGGACGCAGCAGCTCTGTTGACACTAAACTCTGGACACCATCAAGTCAACAGCAGTGAAAGGTCTGTGCTGCAGAAATCAAAATGGATTTTACATATGAAGAGTTTACTGAATTTTACTCTACACTTAACTACAGTTATGAAAGCAATGAAGGCGATAACACTCCACACGAGGAGTCAGTTTATCAGCACCAATCAACATGTTCAAAGGAAATCTTTTGTGTATCTTTACTCGTGCTCAATGTGGTCATATTTCTGCTGGGCTTCTGTGGAAACATACTGGTCATCTGGATTTCTGGCTTCAAGATGAAGAAGACGGTCAACACCACCTGGTACCTGAGCCTTGCGATCTCTGACTTCGTCTTCTGTGCCTTCCTCCCTTTCAGCATCACCAACATGGCGATGGATGAGTGGATCTTTGGCCAATTCATGTGCAAATTCGCCCCCTCTGTTATGTTCCTCAACATGTTCAGCAGCATCTTCCTCCTGGTCGTCATCAGCGTCGACCGCTGTGTGTCAGTCATGTTTCCAGTTTGGGCTCAGAACCATCGCACTGTTAAAAAGGCATCCATTGTTGTTGTCATGTCCTGGCTTCTCGCTATTGCACTGAGCTTTCCCTCTGTCATCTTCCGGGATGTTAGCAGTCACATGGGTAGGACCATTTGCcacaacaaatataattcaaACCAACATGTGATAGTTGCAGTGAGCCGCTTCCTTGCAGGGTTCATTGTCCCTTTCATCGTCATCGTCATCTGCTACTCTATCATCATCCTCAGACTTCGAACCAACAGGATGACCAAATCTTCCAAACCCTTCAAAGTCATGTCTGCACTCGTCGCTGCTTTCTTCATCTGCTGGCTGCCCTATCACGTGTTCGTCCTACTTGAGCTCAGCCATCAAAACTACAACCACGGCCTTTTAACTGCTGGACTCCAAATAGGTACTGCTTTGGCTTCAGCTAACAGCTTCCTTAACCCAGTGTTGTATGTTTTCATGGGCAATGACTTCAAGCGGAAGTTCAAGAGCTCCGTGCTCTCAAAGATGGAGAATGCAATGGTAGAGGAAGGCCGAACCACCAGCCGATACCTTTCCAGGTCCAGCTCCATGGACGGCAGAGCTTCTACACACATCTAGAGACATTTATCCAAAACTGTATACatacttttatatatttatatatatatatatatacgttttCAAATATGCAATAACTaaacacaatatataaaaaatgtcatacatTCACAATGCTTATGAGCATTTCTGTTGCACTTTTCTACTGTTGGCAGCATGGAGAAAGCTGTTGCCAATTCTGGCTCACAAACATAATGTAGTTGAAGAATGCGAGCTTGAGCCAATCTCTAAACTTGTACTTTACTCGTTGTGCACTGCAGGGCGACATCAATCTCATCCAGCAGAAGGAATATTTTCAGAGCAGTATTTGTGGAAAGTTTTGCAGGCAGTTTTTACTGCAGCACATAGATGAATTTAAGTTGTAAAATACAAGGGCTGTAAAATATGATGTATATTGTCTCATAATAAACATAAAAGTATATTAGCATTATTTCAAGCAATGTCTGAAATTATATTTAGCAAAAGGACACCTCAAGGAGCTCCTTTCAcaaacaatgtgtgtgtatgaatggtGACAGTATAGATTTTAGATTGCAGATACATTTGTGAGTCGTGCAGGGCTCTTGCATGATTGCAATTATGTAATTCACTTTGAATATTTTCTTCAGTTTGTTGAATTGATTATTGTAAAGTTTTAATTTGACCACTGAACAATTGACtttgaaacagaaacagaagatCATGAAGAACACTGGCAGAAGGAAAAGAGGCAAGAATTGATTACTGGTATTTCTTTTTCACGCACCTCAGCTGTCCAAAAAGGGATGTTCTGGAGTTGTATTTACCGACACCACAGTATATGCAACAATTTTTGTGTTGCAGCATTTATGTGTTGTATCAGACTGACCCAAATACAATGTGCCAATGGTTGGAGGACTGCTATTGAAATAAGTGCAGTGTAGTTAGCTCTTATGAATCATAGAAATACCACACACCCAGCTCCTATTACTAGATGacaatatttttgttatttcatGTATGAGAGCTGTACAGTGAATGTGACTTGTGCAataaatgtttctgttttttttaaataaagctgTAACTATCAAaatcag

Function

NR:

description
PREDICTED: chemokine-like receptor 1

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004982 N-formyl peptide receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804624.1 True 2224 mRNA 0.40 2 19120145 19122475

Neighbor

gene id symbol gene type direction distance location
sart3 sart3,LOC102781133 coding upstream 20541 19087797 ~ 19099604 (+)
LOC120560931 coro1c,LOC102291280,LOC106937262,LOC107393983,LOC107091240,LOC102218412 coding upstream 45803 19029407 ~ 19074342 (+)
ssh1a ssh1 coding upstream 97264 19002296 ~ 19022881 (+)
svopa svop coding upstream 127166 18985376 ~ 18992979 (+)
alkbh2 alkbh2 coding upstream 146831 18970284 ~ 18973314 (+)
limk2 limk2 coding downstream 85304 19207779 ~ 19226925 (+)
tctn2 tctn2 coding downstream 128701 19251176 ~ 19255928 (+)
atp6v0a2b atp6v0a2 coding downstream 134311 19256786 ~ 19269028 (+)
dnah10 dnah10 coding downstream 147061 19269536 ~ 19296674 (+)
emid1 emid1 coding downstream 176080 19298555 ~ 19357146 (+)
G62836 NA non-coding upstream 33283 19084934 ~ 19086862 (+)
G62796 NA non-coding upstream 137522 18966083 ~ 18982623 (+)
G62755 NA non-coding upstream 255338 18864575 ~ 18864807 (+)
G62741 NA non-coding upstream 347037 18772755 ~ 18773108 (+)
G62732 NA non-coding upstream 371649 18747490 ~ 18748496 (+)
LOC120560789 NA non-coding downstream 29058 19151533 ~ 19153584 (+)
G63005 LOC104920315,LOC103374896,LOC100704901 non-coding downstream 426935 19549410 ~ 19554906 (+)
G63007 NA non-coding downstream 432908 19555383 ~ 19562350 (+)
G63015 LOC107394186,LOC104941583 non-coding downstream 453086 19575561 ~ 19633642 (+)
G63016 NA non-coding downstream 459497 19581972 ~ 19584473 (+)
tmem119a LOC103353570,LOC104946818 other upstream 38491 19076561 ~ 19081654 (+)
mvk mvk,LOC102798305 other upstream 377746 18737518 ~ 18742399 (+)
acacb acacb other upstream 434682 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 645414 18441347 ~ 18474731 (+)
tbx5b tbx5,LOC103470367 other upstream 700555 18407348 ~ 18419590 (+)
rasl10a rasl10a other downstream 307926 19430401 ~ 19448950 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 637121 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 1278472 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 1351176 20473651 ~ 20490586 (+)
G63480 rbm19 other downstream 1553942 20676417 ~ 20677916 (+)

Expression


Co-expression Network