Gene
RNA
| Item | Value |
|---|---|
| gene id | psmd9 |
| gene name | psmd9 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053117.1 |
| NCBI id | CM020914.1 |
| chromosome length | 43979800 |
| location | 20168720 ~ 20172092 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| psmd9 | Predicted to be involved in proteasome regulatory particle assembly. Predicted to be active in cytoplasm and nucleus. Orthologous to human PSMD9 (proteasome 26S subunit, non-ATPase 9). |
| description |
|---|
| 26S proteasome non-ATPase regulatory subunit 9-like |
| id | name | namespace |
|---|---|---|
| GO:0000502 | proteasome complex | cellular_component |
| id | description |
|---|---|
| K06693 | PSMD9, RPN4; 26S proteasome regulatory subunit N4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039804640.1 | True | 1292 | mRNA | 0.42 | 6 | 20168720 | 20172092 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120561472 | LOC104952314,LOC103366651 | coding | upstream | 561 | 20161997 ~ 20168159 (+) |
| clip1a | clip1,LOC102789884 | coding | upstream | 58736 | 20083913 ~ 20109984 (+) |
| zcchc8 | zcchc8 | coding | upstream | 85730 | 20076882 ~ 20082990 (+) |
| rsrc2 | rsrc2 | coding | upstream | 94456 | 20067457 ~ 20074264 (+) |
| LOC120560988 | kntc1 | coding | upstream | 134623 | 20031875 ~ 20034097 (+) |
| LOC120561473 | NA | coding | downstream | 9092 | 20181184 ~ 20191466 (+) |
| LOC120561477 | NA | coding | downstream | 19827 | 20191919 ~ 20220630 (+) |
| pcsk5b | pcsk5 | coding | downstream | 54228 | 20226320 ~ 20300395 (+) |
| LOC120560539 | NA | coding | downstream | 140469 | 20312561 ~ 20327903 (+) |
| foxb2 | foxb2 | coding | downstream | 181150 | 20353242 ~ 20381491 (+) |
| G63204 | NA | non-coding | upstream | 141554 | 20026910 ~ 20027166 (+) |
| G63203 | NA | non-coding | upstream | 141965 | 20025755 ~ 20026755 (+) |
| G63202 | NA | non-coding | upstream | 142972 | 20024913 ~ 20025748 (+) |
| G63192 | NA | non-coding | upstream | 150308 | 20018117 ~ 20018412 (+) |
| G63190 | NA | non-coding | upstream | 152059 | 20016232 ~ 20016661 (+) |
| G63385 | NA | non-coding | downstream | 220315 | 20392407 ~ 20392631 (+) |
| G63377 | NA | non-coding | downstream | 270062 | 20442154 ~ 20442952 (+) |
| LOC120560275 | NA | non-coding | downstream | 386248 | 20558340 ~ 20564445 (+) |
| G63451 | NA | non-coding | downstream | 393576 | 20565668 ~ 20566142 (+) |
| G63457 | NA | non-coding | downstream | 463497 | 20635589 ~ 20637358 (+) |
| c6h2orf68 | c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 | other | upstream | 405196 | 19759596 ~ 19763524 (+) |
| rasl10a | rasl10a | other | upstream | 719770 | 19430401 ~ 19448950 (+) |
| tmem119a | LOC103353570,LOC104946818 | other | upstream | 1087066 | 19076561 ~ 19081654 (+) |
| mvk | mvk,LOC102798305 | other | upstream | 1426321 | 18737518 ~ 18742399 (+) |
| acacb | acacb | other | upstream | 1483257 | 18661157 ~ 18685463 (+) |
| vps13a | vps13a | other | downstream | 228855 | 20400947 ~ 20442093 (+) |
| wdr31 | wdr31,LOC102796061 | other | downstream | 301559 | 20473651 ~ 20490586 (+) |
| G63480 | rbm19 | other | downstream | 504325 | 20676417 ~ 20677916 (+) |
| LOC120560787 | NA | other | downstream | 1416784 | 21588876 ~ 21599289 (+) |
| G63905 | NA | other | downstream | 2757807 | 22929899 ~ 22930205 (+) |
