LOC120559961


Basic Information

Item Value
gene id LOC120559961
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 39162719 ~ 39168563 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639394.1
CAATTAGTTTTAAGAACTACAATTATTAGACAACTCAACTTAATATTTTTGGAGACTTTACTAAACAACTTAAAAGAACGAGTAAGTGGGTAGGACGTGACGTCATTTCCTAACGGTTCTGGCTCAGAGAGCCGACACCAGGGATGTGGCATGGCGGGCTCAGCTACTCCACGGTCTTACTGGACTCCACCGACAATACCTCAAatggaaaacagcagaaaaagaaaatatgagAGAAACTGGAGCGACAGGAAGgcgtgtgtgagaaagaggggAGGACACCAGCGAAGGACAGCAGGCCATATTTGAACTTAGGTCACAGCGTAAAGGACTGAGCCTCACAGGACACGATCCACTAGCTATCGAGGCTCCCTAGCTTTTATTCCTCTTTAAGgtcaacGCAGAGTTTCAACAAATCACCACCATAAATCTTGAGGCAAAATTCATGTCAATTTTGGACCTTCATTCCCCTAAACTCCTTTCCAGAGAGAAACATCGTGCAGAAATGAATATTTCCTACAGAGTGGAATTTCCATTCAGAAAACCATAGAAGTCATCCGATCAATCatcaatgatcaatcatcaatcACCTTGGTGAAGATGATCAAAGAGTTTGAGGTGATGGCTGTGTACCTGTTCCGGAATAAAAGTGGACAGGTCAATGATGTTGGGATCGTCATTGAAGGTTCCATTGTACTCAACCATCTTGGGGATCTTAGCAGATCCTGTTGCTTCCTGCTAGCACTGACCCTATGCTTTGGATCTGAAATATCCCAAAActcatgaatacatttttgagTTTGCTTGTGGAAGTGGATTCCGGAAACCTTTCAGCAAAGGTGCAAAGACTGAAACAATGTGGTCATATAGGTTGCTGAGAGGCAGCTGTTCAgatgagaaaatatgttttatttaatcaGACAATCTCCAGGTGTGGTCAGGCTCAAAGTGTTGGACAGATTTCAATTCTTATAACAAGAATGAATTTATTACGCTTTATTTTTCCATGTCTTTGGGTgtaaacacatttacaacatAAGTTCCTTATGACTGGGCCATTTAGTTGTTTATTCCTTTTAAAACATTGCTCTGGGTTGTCCTTTTATATTCGAAGTAGATGTGTATAAAATCAGTGTCTCACCCTGCCTGCAGACTGTAATGTGTTGTGTAAATGTAGAATGCTAAAAGATGACTACAGTATTTTTTGAGTGTAAATGATTGATACCCGATGGCCGGAGTCAAGTTTTTGCATCTAACAGGTTCAGATTGTTATAAGTGTCTAGCGACATTGTGAATAGGATACCTTATGCACTTCTCACTTATTTGCGCTATACTTTGTCATTGATGTTGCTACTAGTGTTTCACATGTGCATGCATTGCAATCAAATAAAACGTTCATGTTTTGTGAGA

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639394.1 True 1410 lncRNA 0.40 6 39162719 39168563

Neighbor

gene id symbol gene type direction distance location
zgc:153044 LOC104946530 coding downstream 314766 38845687 ~ 38847953 (-)
ube2d4 LOC104946535,LOC101482088,LOC101172587,LOC101069170,LOC108236573,LOC107393720,LOC103397347,LOC104935329 coding downstream 488827 38662069 ~ 38673892 (-)
dbnlb dbnl,LOC102783933 coding downstream 505185 38637016 ~ 38657534 (-)
arid5a NA coding downstream 542256 38600352 ~ 38620463 (-)
gins4 gins4 coding downstream 583371 38560362 ~ 38579348 (-)
mn1b mn1,LOC102781903 coding upstream 198114 39366677 ~ 39394822 (-)
LOC120560407 ttc28 coding upstream 281370 39449933 ~ 39841426 (-)
LOC120560309 hectd4 coding upstream 718040 39886603 ~ 39997858 (-)
LOC120559991 rph3a,LOC101477332,LOC102779512,LOC104921713 coding upstream 872807 40041370 ~ 40131231 (-)
dpysl2a LOC100711297,LOC102201039,LOC101475506 coding upstream 1052966 40221529 ~ 40269220 (-)
G67996 NA non-coding downstream 28850 39133038 ~ 39133869 (-)
G67986 NA non-coding downstream 196710 38965753 ~ 38966009 (-)
G67976 NA non-coding downstream 245272 38826670 ~ 38917447 (-)
G67972 NA non-coding downstream 336748 38825291 ~ 38825971 (-)
G67969 NA non-coding downstream 377402 38782839 ~ 38785317 (-)
G68052 NA non-coding upstream 297989 39466552 ~ 39466977 (-)
G68672 NA non-coding upstream 345287 39513850 ~ 39514118 (-)
G68706 NA non-coding upstream 714482 39883045 ~ 39883634 (-)
G68715 NA non-coding upstream 745824 39914387 ~ 39971420 (-)
G68686 NA non-coding upstream 877132 40045695 ~ 40128272 (-)
LOC120560036 NA other downstream 817923 38336088 ~ 38344796 (-)
G67577 NA other downstream 1607952 37535859 ~ 37554767 (-)
G67523 NA other downstream 1817636 37344461 ~ 37345083 (-)
adrb3a adgra2,LOC104963277 other downstream 1836318 37229742 ~ 37326401 (-)
G67483 pdlim2,LOC104963286,LOC103470528,LOC100702294 other downstream 2011073 37098792 ~ 37151646 (-)
LOC120560826 pitpnb,LOC104952320 other upstream 241676 39410239 ~ 39461568 (-)
G68717 NA other upstream 766809 39935372 ~ 39935846 (-)
LOC120560061 NA other upstream 831443 40000006 ~ 40026743 (-)
ppp2r2aa LOC104921711,LOC103356615,LOC108236503,LOC104961741,LOC106520125 other upstream 1144806 40313369 ~ 40330695 (-)
G68952 NA other upstream 1755511 40924074 ~ 40950607 (-)

Expression


Co-expression Network