LOC120560032


Basic Information

Item Value
gene id LOC120560032
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 25839136 ~ 25843093 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639405.1
ACTTTCAGTAACCCAGTAGTTGGGTTAATGGTTTTGGACTGTGCCTTGATCTGAATAACCCAACCAATGATCATTTTAACCCAGTGGTTGGGTTACATTCAAGTTTGGGTTCCTCCTCCAacggtctttttcttttctccgaGGCGGGAGAACACTTTTGGAAACACTGAAGCGATTGAATATGGAGGACTTTGTTAAGCTAAAGTTAACAGAACGGCAACTTCTTGAGCTGATTGACACTTTTGCAGATTGTGCAGGACTTCGAGGTTCTTCATAAAGAGGCATCAGACTAAATCTTTGACCTGGAGGAGGTTCAGCGAGAAGCTTGTTCATGCGGCCCAGTGGGAGGGGTAGAAGCTCCACgtgcagacagagacagagtctTTGTCTCAAGgCTCCAAAGACTACATTGCCCTGATGGTTCTGCCAGGTCTGATTCCACCTGCAGTCTTCAGGATGGGCCGAAAGACCGTGAGGACTACAGTGTCTGACGCCATGAAGGCCTTCATCGATCTTAAGCCTgTCGGAGCCAACATGGTGGAGTACCTTCAGGCAGCAGAGCAGGCCATACCCCTGCACCCTGGTGTTGGGAGGCGAGGACTGCTGCTCTCAGGCATTCACCGTTCCCAGTGGGCCGGCCCTGGAGCACGACAGCG

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639405.1 True 656 lncRNA 0.51 5 25839136 25843093

Neighbor

gene id symbol gene type direction distance location
LOC120559963 LOC100704176,LOC102304428,LOC102794704,LOC102195896,LOC101487439 coding upstream 55099 25774378 ~ 25784037 (+)
LOC120560092 LOC101464110,LOC102227132,LOC106956827,LOC106513657,LOC105931341,LOC103374419,LOC101075487 coding upstream 76230 25757088 ~ 25762906 (+)
LOC120560772 pdxp,LOC102792570 coding upstream 179675 25655685 ~ 25659461 (+)
LOC120560771 ugt3a2,LOC108233592 coding upstream 185980 25647115 ~ 25653156 (+)
spef2 LOC104950669 coding upstream 192659 25626004 ~ 25646477 (+)
LOC120560362 izumo1 coding downstream 96683 25939776 ~ 25949337 (+)
dusp2 dusp2,LOC106948589,LOC103145864,LOC102224120,LOC103470063 coding downstream 106361 25949454 ~ 25952579 (+)
adra2b LOC104943288,LOC102796455,LOC102308546,LOC103357149,LOC102212827,LOC100694621,LOC101484392,LOC105931407 coding downstream 115706 25958799 ~ 25964487 (+)
gpat2 LOC101483931,LOC102796756,LOC102305881,LOC102195621 coding downstream 137815 25980908 ~ 26161608 (+)
zgc:152830 LOC103357146 coding downstream 331131 26174224 ~ 26180116 (+)
G64607 NA non-coding upstream 43695 25788457 ~ 25795441 (+)
LOC120560927 NA non-coding upstream 91247 25713910 ~ 25747889 (+)
G64592 NA non-coding upstream 139352 25697063 ~ 25699784 (+)
G64578 NA non-coding upstream 175751 25663027 ~ 25663385 (+)
G64495 NA non-coding upstream 283355 25552939 ~ 25555781 (+)
G64643 NA non-coding downstream 72851 25915944 ~ 25916892 (+)
G64657 NA non-coding downstream 74094 25917187 ~ 25917476 (+)
G64658 NA non-coding downstream 74672 25917765 ~ 25918093 (+)
G64663 NA non-coding downstream 79070 25922163 ~ 25922388 (+)
G64677 NA non-coding downstream 85831 25928924 ~ 25929158 (+)
LOC120561182 LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747 other upstream 142560 25684964 ~ 25696576 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other upstream 1001688 24823718 ~ 24837448 (+)
prxl2c aaed1 other upstream 1016070 24821314 ~ 24823066 (+)
G64108 NA other upstream 2145845 23692662 ~ 23693291 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other upstream 2276851 23487967 ~ 23562285 (+)
LOC120560031 LOC104941040,LOC103357154,LOC102795853 other downstream 71186 25914279 ~ 25915577 (+)
LOC120560359 NA other downstream 82994 25926087 ~ 25928596 (+)
nsd3 whsc1l1 other downstream 516027 26359120 ~ 26383843 (+)
G64814 cldn5,LOC103357131 other downstream 569776 26412869 ~ 26414597 (+)
c6h22orf39 clg12h22orf39 other downstream 651191 26494284 ~ 26496987 (+)

Expression


Co-expression Network