LOC120560076


Basic Information

Item Value
gene id LOC120560076
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 11873492 ~ 11876959 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639416.1
CGGGACAGTTCAATTAGTTGTTCATCCAGGTCTGTGGGCCGGGACAATTCAAGCAGTCGTGTACACAGGTCCCAGGCTGTGGAAGGTCTTTCACATGAAATGTCCAGTTATAATAGGGATGTGCCAACCACATTCCCCCTGTCAGAAGCGAAATTCCAAAAAATAGTGCTGACAAAGCTGGTGACTCTCACTGATGAGGTCAAACAACTCCAGAGGAGCATGCCTAAatctagcattgagatcataAAGATTAACACCTTGGAAGAGTTCGAGAGGGAGGAGGCTTCTCTTCTGg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639416.1 True 295 lncRNA 0.47 5 11873492 11876959

Neighbor

gene id symbol gene type direction distance location
LOC120561470 LOC107749966 coding upstream 25352 11837758 ~ 11848140 (+)
stxbp1b LOC103353854,LOC103141940,LOC100712335 coding upstream 82863 11728462 ~ 11790629 (+)
LOC120561249 fut7,LOC103353858 coding upstream 297138 11573980 ~ 11576354 (+)
ankrd34bb NA coding upstream 596008 11275018 ~ 11277484 (+)
gtf2h2 LOC100696048,LOC102788170,LOC101466805,LOC102292669,LOC102204724 coding upstream 641605 11218951 ~ 11231887 (+)
dpp7 dpp7 coding downstream 244466 12121425 ~ 12158698 (+)
LOC120561040 NA coding downstream 597122 12474081 ~ 12501550 (+)
LOC120561039 NA coding downstream 597214 12474173 ~ 12485766 (+)
fgf17 fgf17,LOC100689794 coding downstream 863907 12740866 ~ 12748536 (+)
fkbp15b NA coding downstream 875551 12752510 ~ 12794431 (+)
G60876 NA non-coding upstream 376 11868625 ~ 11873116 (+)
G60864 NA non-coding upstream 77165 11795981 ~ 11796327 (+)
G60822 NA non-coding upstream 269056 11603778 ~ 11604436 (+)
G60821 NA non-coding upstream 269881 11603180 ~ 11603611 (+)
G60780 NA non-coding upstream 328833 11488366 ~ 11544659 (+)
LOC120560077 NA non-coding downstream 14 11876973 ~ 11880769 (+)
G60891 NA non-coding downstream 21134 11898093 ~ 11898916 (+)
G60892 NA non-coding downstream 22764 11899723 ~ 11899950 (+)
G60893 NA non-coding downstream 28687 11905646 ~ 11905914 (+)
G60894 NA non-coding downstream 29484 11906443 ~ 11906869 (+)
LOC120561144 NA other upstream 1121052 10748116 ~ 10752440 (+)
LOC120561142 NA other upstream 1126539 10726438 ~ 10746953 (+)
LOC120560959 golga7,LOC104937560,LOC106585131 other upstream 1892438 9926950 ~ 9981054 (+)
ppp3cca LOC104934810,LOC100705072,LOC105915415,LOC101486266,LOC102777092,LOC103366803,LOC102200614,LOC101072650,LOC106932221 other upstream 2817727 9017891 ~ 9055765 (+)
vps37ba vps37b,vps37c,LOC102776795 other upstream 2858589 8991441 ~ 9014903 (+)
G60897 NA other downstream 49224 11926183 ~ 11926601 (+)
G61139 tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 other downstream 1044188 12921147 ~ 12923836 (+)
LOC120560904 crb2,LOC103353841,LOC106959700,LOC106929552 other downstream 1255139 13132098 ~ 13180491 (+)
G61337 LOC100705941,LOC102292089,LOC108234925,LOC106529513,LOC104934772,LOC103365846 other downstream 2230524 14107483 ~ 14109546 (+)
G61338 htr7,LOC104934772,LOC101065316 other downstream 2264483 14141442 ~ 14142050 (+)

Expression


Co-expression Network