LOC120560738


Basic Information

Item Value
gene id LOC120560738
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 26897902 ~ 26899558 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639508.1
TTGATCACAATGTAGTTACCGCTAAGTAGTTTTCAGTGACCAATCACCACGTCACAAGATCCTCAGACGATTCAACTGGATATTTGCTCCGGAGGAAACAAACACGCCGATGGCACATCCAGTATGCCGATGCGGATGTTAACTGGACCTGTTAACTGCAAGAATGAAGACAAATCCAAAGGATAACATTTTCTTTGCACGGACGGGGAGTTAAAACACCATAACAGCAGAAACTTGGGAATCTCCAAAACTGGAAGGAACGACGGAATTTCCACTGCAGACGACTGATGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639508.1 True 292 lncRNA 0.45 3 26897902 26899558

Neighbor

gene id symbol gene type direction distance location
osmr NA coding upstream 10076 26877033 ~ 26887826 (+)
LOC120560731 arhgef28,LOC104956788,LOC103359538 coding upstream 20951 26837272 ~ 26876951 (+)
utp15 utp15 coding upstream 60730 26830051 ~ 26837172 (+)
LOC120561461 LOC106926604,LOC102220481,LOC108166557,LOC108233617 coding upstream 98661 26797823 ~ 26799241 (+)
LOC120561053 NA coding upstream 103330 26793691 ~ 26794572 (+)
gck gck coding downstream 2241 26901799 ~ 26907519 (+)
myl7 myl7,LOC101480470 coding downstream 8645 26908203 ~ 26910428 (+)
adamts12 adamts12 coding downstream 24970 26924528 ~ 26945467 (+)
fgf10b fgf10,LOC104956796 coding downstream 52662 26952220 ~ 26961992 (+)
paip1 paip1,LOC104941454 coding downstream 65926 26965484 ~ 26974939 (+)
G64967 ykt6 non-coding upstream 1759 26893701 ~ 26896143 (+)
G64949 btf3,LOC103470010,LOC107089645,LOC106958054,LOC106926613 non-coding upstream 68717 26761391 ~ 26829185 (+)
G64944 NA non-coding upstream 213647 26682518 ~ 26684255 (+)
G64930 NA non-coding upstream 234376 26662767 ~ 26663526 (+)
G64893 NA non-coding upstream 317089 26572244 ~ 26580813 (+)
G65083 NA non-coding downstream 300391 27199949 ~ 27200190 (+)
G65106 NA non-coding downstream 479440 27378998 ~ 27379215 (+)
G65108 NA non-coding downstream 489899 27389457 ~ 27389862 (+)
G65171 NA non-coding downstream 577190 27476748 ~ 27476966 (+)
G65272 NA non-coding downstream 1003517 27903075 ~ 27904933 (+)
si:dkey-178e17.1 slc25a1,LOC100697273,LOC101470788,LOC103359526,LOC102784907,LOC107394264,LOC103145904 other upstream 236007 26644661 ~ 26661895 (+)
cltcl1 LOC100691387,LOC103359525 other upstream 253735 26614237 ~ 26644167 (+)
c6h22orf39 clg12h22orf39 other upstream 400915 26494284 ~ 26496987 (+)
G64814 cldn5,LOC103357131 other upstream 483305 26412869 ~ 26414597 (+)
nsd3 whsc1l1 other upstream 514059 26359120 ~ 26383843 (+)
ndufs4 ndufs4 other downstream 112652 27012210 ~ 27039599 (+)
G65084 lipg other downstream 305676 27205234 ~ 27370959 (+)
mboat4 NA other downstream 1946068 28845626 ~ 28849471 (+)
ubac1 ubac1 other downstream 2445022 29344580 ~ 29351756 (+)
fbxo21 fbxo21 other downstream 3287290 30186848 ~ 30212108 (+)

Expression


Co-expression Network