Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120561177 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053117.1 |
| NCBI id | CM020914.1 |
| chromosome length | 43979800 |
| location | 3837307 ~ 3837679 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005639569.1 | True | 264 | lncRNA | 0.49 | 2 | 3837307 | 3837679 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120561175 | ube2l3,LOC106562742,LOC104961333,LOC107396654,LOC102226353,LOC107088009,LOC108248341 | coding | upstream | 9880 | 3818322 ~ 3827427 (+) |
| arid3c | LOC103046366,LOC105901092,LOC107676636,LOC107552548,LOC108438346 | coding | upstream | 61634 | 3688045 ~ 3775673 (+) |
| mamdc2a | mamdc2 | coding | upstream | 162082 | 3630736 ~ 3675225 (+) |
| fam189a2 | LOC104953220 | coding | upstream | 289974 | 3525307 ~ 3547333 (+) |
| fxn | fxn | coding | upstream | 453727 | 3375881 ~ 3383580 (+) |
| rad17 | rad17,LOC102794325 | coding | downstream | 10800 | 3848479 ~ 3868576 (+) |
| ccdc125 | NA | coding | downstream | 31354 | 3869033 ~ 3889655 (+) |
| si:dkey-3h3.3 | NA | coding | downstream | 361844 | 4199523 ~ 4208499 (+) |
| LOC120560812 | thg1l,LOC106912903,LOC103154062 | coding | downstream | 388357 | 4226036 ~ 4227032 (+) |
| pdzd2 | LOC102293871 | coding | downstream | 433825 | 4271504 ~ 4343670 (+) |
| G58986 | NA | non-coding | upstream | 34210 | 3799038 ~ 3803097 (+) |
| G58948 | NA | non-coding | upstream | 230998 | 3606062 ~ 3606309 (+) |
| G58944 | NA | non-coding | upstream | 281128 | 3547808 ~ 3556179 (+) |
| G58941 | NA | non-coding | upstream | 313686 | 3522846 ~ 3523621 (+) |
| G58900 | NA | non-coding | upstream | 332558 | 3504451 ~ 3504749 (+) |
| G59033 | NA | non-coding | downstream | 53366 | 3891045 ~ 3891853 (+) |
| G59032 | NA | non-coding | downstream | 57991 | 3895670 ~ 3896241 (+) |
| G59042 | NA | non-coding | downstream | 123381 | 3961060 ~ 3961319 (+) |
| G59093 | NA | non-coding | downstream | 295169 | 4132848 ~ 4133064 (+) |
| G59132 | NA | non-coding | downstream | 470240 | 4307919 ~ 4329460 (+) |
| LOC120560521 | tjp2 | other | upstream | 314551 | 3435165 ~ 3522756 (+) |
| lman2lb | NA | other | upstream | 953446 | 2878374 ~ 2883861 (+) |
| dock5 | dock5 | other | upstream | 1524642 | 2273678 ~ 2312665 (+) |
| lmx1bb | lmx1b,LOC102213269,LOC100696266 | other | upstream | 2999446 | 789405 ~ 837861 (+) |
| LOC120560799 | NA | other | upstream | 3624924 | 210742 ~ 212383 (+) |
| G59086 | NA | other | downstream | 279600 | 4117279 ~ 4117631 (+) |
| G59172 | sub1 | other | downstream | 586462 | 4424141 ~ 4429981 (+) |
| trnal-aag_1 | NA | other | downstream | 594492 | 4432171 ~ 4432253 (+) |
| trnaq-uug_2 | NA | other | downstream | 594989 | 4432668 ~ 4432739 (+) |
| mrpl41 | mrpl41 | other | downstream | 692375 | 4530054 ~ 4531165 (+) |
