LOC120561196


Basic Information

Item Value
gene id LOC120561196
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2491267 ~ 2491794 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639571.1
CGTCAAATGCTCCTGCTGAAGCCATGGTGATGGATGAAGATGAAGAGCTGGAGAGAGTGATGCTGAGCATTTCTCCTACCAAGCAACATGAGCAAAGCTCTGTTTCTGCACCAGCATCATCAACTGCCAGACCACCACAGGCTTCTGGAACAGATAGAGGTTCTTAACCAAAACGTCCTGCATCAGCAGACAACTCTGGGACCATGAATTCTTATCCCAATATGAAGCATGACTTAAAGCTTTCCGTCTCATGTTGACCATGTTCTGgtcatgtttgtgttttggtgttCTACCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639571.1 True 296 lncRNA 0.46 3 2491267 2491794

Neighbor

gene id symbol gene type direction distance location
lrrtm4l2 LOC104959582,LOC103353626 coding downstream 134997 2353073 ~ 2356270 (-)
vsig8b NA coding downstream 160444 2324986 ~ 2330823 (-)
LOC120560449 NA coding downstream 171991 2318287 ~ 2319276 (-)
cabin1 cabin1 coding downstream 228453 2217592 ~ 2262814 (-)
tbx16 LOC104928806,LOC103353632 coding downstream 274556 2207405 ~ 2216711 (-)
LOC120560021 NA coding upstream 12678 2504472 ~ 2508814 (-)
LOC120560452 LOC104959125 coding upstream 45424 2537218 ~ 2537559 (-)
LOC120560454 NA coding upstream 59634 2551428 ~ 2552694 (-)
ggt5a ggt5 coding upstream 127421 2619215 ~ 2627761 (-)
si:ch211-170d8.2 NA coding upstream 175468 2667262 ~ 2671095 (-)
G58588 NA non-coding downstream 11659 2476272 ~ 2479608 (-)
G58560 NA non-coding downstream 156245 2334746 ~ 2335022 (-)
G58559 NA non-coding downstream 157078 2333979 ~ 2334189 (-)
LOC120561446 NA non-coding downstream 308539 2179896 ~ 2182728 (-)
G58529 NA non-coding downstream 317947 2172439 ~ 2173320 (-)
G58596 NA non-coding upstream 26161 2517955 ~ 2518201 (-)
G58625 NA non-coding upstream 64851 2556645 ~ 2556863 (-)
G58678 NA non-coding upstream 224107 2715901 ~ 2716316 (-)
G58716 NA non-coding upstream 309948 2801742 ~ 2801971 (-)
G58725 NA non-coding upstream 321577 2813371 ~ 2813695 (-)
ankrd39 LOC103353637,LOC100700369 other downstream 351624 2137796 ~ 2139643 (-)
rimbp2 rimbp2,LOC107081823,LOC108247306,LOC103353655 other downstream 833219 1532053 ~ 1658048 (-)
LOC120560045 NA other downstream 2466318 17589 ~ 24949 (-)
LOC120560995 NA other upstream 58252 2550046 ~ 2551366 (-)
ggt1a ggt1,LOC102775580,LOC108234964 other upstream 86081 2577875 ~ 2592746 (-)
si:ch211-107p11.3 LOC103353652,LOC102075650,LOC108234931,LOC104950460 other upstream 194097 2685891 ~ 2689087 (-)
LOC120561394 LOC107097799,LOC103353613,LOC101077666 other upstream 198816 2690610 ~ 2692543 (-)
LOC120561349 donson,LOC102310661 other upstream 342394 2834188 ~ 2846607 (-)

Expression


Co-expression Network