LOC120561203


Basic Information

Item Value
gene id LOC120561203
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 35255661 ~ 35258072 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639572.1
GgataccaggtgagctacaagCCACCagaagcagcagctgcaggacAGAATAATTCAAAATGTCACAGACGTGACGGCGCTCCTGGTGGTGGAAGAGGGAACTGCAGTGTCACAGTTACTGCCTTCAATACGGCCGGCTGTGGACCTGCTGCACATCTCCGcattgacacacaaacacagaacaCTCTCCCGTCAGTCAGAAGCTTATGGGTGTCCAGTTCTTTCCCGGCTATGAAGGGCCTTCTGGTCCAATGGGAGAGCCCCACAGCCTTGCCCTCTGTCCCGCCGTCATTTTGCTGTTCAGTGGCGCTCCAAGACCCGTCCATCCACCAGCCGCTGGACCACAGTGGACTACAACACCACCTCCACTGTCATACGAGCACTGATGGAGCCGGTCCAACTGAAGGTGGGGGTCGTGACCAAAACCACAGTGACAGTGGTGTGGGTGTTGCAAAGGAAGGCTGGACCAATCAGAGTGAACAGATAAAGAGTCATGCTGACAAAAGAATTGGAGAGCAAAACACTGTATTTGTGGCCGGACCAATGGCAGCTCACCTTCAACAACCTGAAACCCAACACTGAGTATTCTCTTCTCCTATTGGCTGATGATGTTTCCAGAAACATTATCCCTGTGAGGACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639572.1 True 641 lncRNA 0.53 4 35255661 35258072

Neighbor

gene id symbol gene type direction distance location
LOC120561082 NA coding upstream 45946 35200417 ~ 35209715 (+)
LOC120560891 LOC104934778,LOC100695474,LOC103374565,LOC101464334,LOC102198690 coding upstream 73665 35161583 ~ 35181996 (+)
slc2a8 slc2a8,slc2a6 coding upstream 95007 35145750 ~ 35160654 (+)
mymk tmem8c,LOC107720238 coding upstream 123914 35125559 ~ 35131747 (+)
LOC120561072 NA coding upstream 303184 34951502 ~ 34952477 (+)
LOC120560914 NA coding downstream 122653 35380725 ~ 35394499 (+)
znf608 znf608,LOC102795784 coding downstream 205219 35463291 ~ 35522112 (+)
LOC120560628 NA coding downstream 338734 35596806 ~ 35603337 (+)
LOC120560627 NA coding downstream 349396 35607468 ~ 35611982 (+)
LOC120560626 NA coding downstream 355778 35613850 ~ 35619866 (+)
G66907 NA non-coding upstream 253465 35000278 ~ 35002196 (+)
G66834 NA non-coding upstream 426007 34828892 ~ 34829654 (+)
G66830 NA non-coding upstream 439334 34815589 ~ 34816327 (+)
G66769 NA non-coding upstream 746048 34508142 ~ 34509613 (+)
G66695 NA non-coding upstream 768910 34486538 ~ 34486751 (+)
G66997 NA non-coding downstream 130704 35388776 ~ 35417807 (+)
LOC120560688 NA non-coding downstream 637079 35895151 ~ 35898183 (+)
G67202 NA non-coding downstream 797612 36055684 ~ 36059486 (+)
G67216 NA non-coding downstream 836743 36094815 ~ 36096123 (+)
G67219 NA non-coding downstream 862823 36120895 ~ 36128995 (+)
LOC120561428 fam163b,LOC103374717,LOC102797860,LOC101061299,LOC102298266,LOC101485828,LOC104964271,LOC102215914 other upstream 196030 35046844 ~ 35059631 (+)
G66832 NA other upstream 390971 34861499 ~ 34864690 (+)
LOC120561070 NA other upstream 481855 34765930 ~ 34773806 (+)
cfap157 NA other upstream 728256 34514010 ~ 34527405 (+)
G66578 NA other upstream 1479263 33775925 ~ 33776398 (+)
LOC120560625 cep120 other downstream 264593 35522665 ~ 35549231 (+)
G67146 NA other downstream 582802 35840874 ~ 35852056 (+)
G67145 NA other downstream 583462 35841534 ~ 35854161 (+)
G67152 NA other downstream 613351 35871423 ~ 36023264 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other downstream 983507 36241579 ~ 36492695 (+)

Expression


Co-expression Network