LOC120561239



Basic Information


Item Value
gene id LOC120561239
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 16563470 ~ 16564460 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005639577.1
TATGCgtggtggaggagctgcagcagcaagAGGACAAAATCGAGCTCAAGTTTCAAATGAAATTCAGGCAACAATTATTGACCATGTCATCAATAATGGCTTGTGCTTTAGAGAGGCTGGACAAAGGGTCCAGCCCATTCTGACTCGGAGCACTGTGGCATCTATTGTCAGGCTTTTTTGGAATGAGAACAGGATCCACACATTGCCACACACTGGTGGCAGAGGAAAGATATTTAGTATTGAACAGGAGTCTGCCATTGTAGATATGGTAGTGGCAAACAATGCAATCAGACTGCGTGAAATCCAGGCAGCAGTAATTTAAGATCAGGGAGCATTTAGAAATATAAACCGTGTGAGTTTGGCAACTATAGATCGAGACCTTAAACGACACCATGTCGGAATGAAGCAGCTCTACCGAGTTCCATTTCAAAGAAACTCTGACATCGTAAAGGAGGCACGATTCCAGTATGTGCAGAGAATAATGGAGCTTGAAGCTGAAGGGGCACATCACAAATTCATTTTTGTGGATGAAGCCGGCTTCAACCTCTGTAAAGTGAGGAGATGCGGGAGGAACATCATTGGGCAGAGGGCCACTGTCACAGTGCCAGGTCAGAGGGGTGCCAATAACCCCATGTGTGCCCCCATCTCCAATGATTGGGTCCTTTGCCACATACCAACCATTGGCCCATACAATACAGAACGCCTCATCACATTTCTTGATTCATTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005639577.1 True 727 lncRNA 0.46 3 16563470 16564460

Neighbor


gene id symbol gene type direction distance location
LOC120561320 NA coding downstream 14903 16547281 ~ 16548567 (-)
nol6 nol6 coding downstream 16998 16531652 ~ 16546472 (-)
aqp3a LOC103362379,LOC108242818 coding downstream 44154 16512377 ~ 16519316 (-)
nr2f1a nr2f1,nr2f1a,LOC107671052 coding downstream 430524 16124488 ~ 16132946 (-)
slf1 slf1 coding downstream 752050 15777243 ~ 15811420 (-)
LOC120560423 rasa1 coding upstream 458078 17022538 ~ 17055682 (-)
LOC120560528 vcan,LOC102793126 coding upstream 918180 17482640 ~ 17535168 (-)
LOC120561237 NA coding upstream 1050681 17615141 ~ 17618859 (-)
f2r f2r,LOC100706519,LOC102798097 coding upstream 1150076 17714536 ~ 17718413 (-)
iqgap2 iqgap2 coding upstream 1154168 17718628 ~ 17755600 (-)
LOC120561369 NA non-coding downstream 55219 16507046 ~ 16508251 (-)
G62065 NA non-coding downstream 57348 16505270 ~ 16506122 (-)
G62001 NA non-coding downstream 421789 16117227 ~ 16141681 (-)
G61998 NA non-coding downstream 463087 16096421 ~ 16100383 (-)
G61996 NA non-coding downstream 580059 15982876 ~ 15983411 (-)
G62103 NA non-coding upstream 45113 16609573 ~ 16663861 (-)
G62104 NA non-coding upstream 46017 16610477 ~ 16620203 (-)
G62114 NA non-coding upstream 111232 16675692 ~ 16686359 (-)
LOC120560958 NA non-coding upstream 179825 16744285 ~ 16745598 (-)
G62127 NA non-coding upstream 250933 16815393 ~ 16818043 (-)
LOC120561322 NA other downstream 12295 16548617 ~ 16551175 (-)
G62064 NA other downstream 58403 16504626 ~ 16505067 (-)
LOC120560105 LOC103362503 other downstream 110982 16152420 ~ 16452488 (-)
LOC120560838 NA other downstream 1161146 15369026 ~ 15402324 (-)
mfsd14bb LOC103398013,LOC102210719 other downstream 1285286 15252615 ~ 15278184 (-)
LOC120560425 NA other upstream 519019 17083479 ~ 17085821 (-)
G62194 NA other upstream 559536 17123996 ~ 17124477 (-)
G62209 hapln1,LOC103373858,LOC106939955 other upstream 913846 17478306 ~ 17480814 (-)
LOC120560614 NA other upstream 970023 17534483 ~ 17568014 (-)
LOC120561236 LOC102290490,LOC106517513 other upstream 1033628 17598088 ~ 17605120 (-)

Expression



Co-expression Network