trnaq-cug_4


Basic Information

Item Value
gene id trnaq-cug_4
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 9213242 ~ 9213313 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_251
GGTTCCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCAGCAATCCGAGTTCAAATCTCAGTGGAACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_251 True 72 tRNA 0.47 1 9213242 9213313

Neighbor

gene id symbol gene type direction distance location
tcima LOC104938922,LOC102777577,LOC103152810,LOC103353800,LOC101487124,LOC102217691 coding upstream 78662 9133547 ~ 9134580 (+)
LOC120560490 abcb9 coding upstream 223879 8972286 ~ 8989363 (+)
LOC120560802 abcb9,LOC106965289 coding upstream 248136 8939829 ~ 8965106 (+)
zgc:113436 LOC102776507 coding upstream 279989 8922283 ~ 8933253 (+)
slc4a5a slc4a5,LOC100703988,LOC101470466,LOC102293566,LOC102195261 coding upstream 305518 8861970 ~ 8907724 (+)
LOC120560494 NA coding downstream 154886 9368199 ~ 9375746 (+)
marveld2b LOC104926564,LOC103371582,LOC102788930,LOC102293847,LOC101466532 coding downstream 1959706 11173019 ~ 11188211 (+)
oclnb LOC104926565,LOC103397562 coding downstream 1980174 11193487 ~ 11206112 (+)
gtf2h2 LOC100696048,LOC102788170,LOC101466805,LOC102292669,LOC102204724 coding downstream 2005638 11218951 ~ 11231887 (+)
ankrd34bb NA coding downstream 2061705 11275018 ~ 11277484 (+)
G60273 NA non-coding upstream 222238 8989818 ~ 8991004 (+)
G60275 NA non-coding upstream 223529 8965505 ~ 8989713 (+)
G60232 NA non-coding upstream 283414 8854273 ~ 8929828 (+)
G60229 NA non-coding upstream 356812 8833627 ~ 8856430 (+)
G60223 NA non-coding upstream 428322 8784653 ~ 8784920 (+)
G60363 NA non-coding downstream 69499 9282812 ~ 9283636 (+)
G60378 NA non-coding downstream 250615 9463928 ~ 9464187 (+)
G60387 NA non-coding downstream 277697 9491010 ~ 9491626 (+)
G60410 NA non-coding downstream 558445 9771758 ~ 9772052 (+)
G60414 NA non-coding downstream 574124 9787437 ~ 9787707 (+)
ppp3cca LOC104934810,LOC100705072,LOC105915415,LOC101486266,LOC102777092,LOC103366803,LOC102200614,LOC101072650,LOC106932221 other upstream 157477 9017891 ~ 9055765 (+)
vps37ba vps37b,vps37c,LOC102776795 other upstream 198339 8991441 ~ 9014903 (+)
LOC120560007 NA other upstream 778570 8431537 ~ 8434672 (+)
LOC120560006 NA other upstream 785497 8423189 ~ 8427745 (+)
cux2b cux2,LOC102795992 other upstream 1161902 7947252 ~ 8051340 (+)
LOC120560959 golga7,LOC104937560,LOC106585131 other downstream 713637 9926950 ~ 9981054 (+)
LOC120561142 NA other downstream 1513125 10726438 ~ 10746953 (+)
LOC120561144 NA other downstream 1534803 10748116 ~ 10752440 (+)
G60897 NA other downstream 2712870 11926183 ~ 11926601 (+)
G61139 tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 other downstream 3707834 12921147 ~ 12923836 (+)

Expression


Co-expression Network