trnas-gcu_1


Basic Information

Item Value
gene id trnas-gcu_1
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14967679 ~ 14967760 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_256
GACGaggtggccgagtggttaaggtgaTGGACTGCTAATCCATTGTTCTCTGCATGTGTGGGTTTGAATCCCATCCCCATCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_256 True 82 tRNA 0.52 1 14967679 14967760

Neighbor

gene id symbol gene type direction distance location
tsc1a tsc1 coding downstream 342482 14600261 ~ 14625197 (-)
ak8 NA coding downstream 368537 14582084 ~ 14599142 (-)
ddx31 ddx31,LOC102778005 coding downstream 387516 14566031 ~ 14580163 (-)
qsox2 qsox2,LOC102781541 coding downstream 419816 14535268 ~ 14547863 (-)
LOC120559985 nacc2,LOC102304562,LOC102778489,LOC103397964,LOC101483941 coding downstream 434920 14515799 ~ 14532759 (-)
LOC120560533 NA coding upstream 21387 14989147 ~ 14991145 (-)
LOC120560022 slc18a1,LOC100703472,LOC106527823 coding upstream 78122 15045882 ~ 15064841 (-)
ppiaa LOC107103142,LOC106904245,LOC103470758,LOC106953379,LOC103129635 coding upstream 102507 15070267 ~ 15076395 (-)
LOC120560949 LOC103368073,LOC103397982 coding upstream 111125 15078885 ~ 15104108 (-)
ogdha LOC103368074,LOC101476977,LOC103397981 coding upstream 141256 15109016 ~ 15152609 (-)
G61695 NA non-coding downstream 1894 14965307 ~ 14965785 (-)
G61631 NA non-coding downstream 100022 14802564 ~ 14867657 (-)
G61647 NA non-coding downstream 168530 14798920 ~ 14799149 (-)
G61601 NA non-coding downstream 336706 14629611 ~ 14630973 (-)
LOC120560921 NA non-coding downstream 407950 14559086 ~ 14559729 (-)
LOC120560531 NA non-coding upstream 15707 14983467 ~ 14985185 (-)
G61699 NA non-coding upstream 25717 14993477 ~ 14993780 (-)
G61706 NA non-coding upstream 58759 15026519 ~ 15027395 (-)
G61711 NA non-coding upstream 100782 15068542 ~ 15068893 (-)
G61740 NA non-coding upstream 138505 15106265 ~ 15129963 (-)
trnas-gcu NA other downstream 16096 14951502 ~ 14951583 (-)
trnae-cuc_15 NA other downstream 18849 14948759 ~ 14948830 (-)
trnaa-agc_15 NA other downstream 23111 14944496 ~ 14944568 (-)
trnaa-agc_14 NA other downstream 28632 14938975 ~ 14939047 (-)
si:ch73-138n13.1 LOC102794857,LOC107084631 other downstream 603353 14328151 ~ 14364326 (-)
trnas-gcu_2 NA other upstream 319 14968079 ~ 14968160 (-)
trnas-gcu_3 NA other upstream 736 14968496 ~ 14968577 (-)
LOC120559984 NA other upstream 45773 15013533 ~ 15017816 (-)
tti2 tti2 other upstream 62116 15029876 ~ 15041380 (-)
sdhaf1 sdhaf1,LOC102800057 other upstream 248790 15216550 ~ 15218422 (-)

Expression


Co-expression Network