trnac-gca_20


Basic Information

Item Value
gene id trnac-gca_20
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15618744 ~ 15618815 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_260
GGGGGTatagctcagtggtagagcatttGACTGCAGATCAAGAGGTCTCTGGTTCAAATCCAGATGCCCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_260 True 72 tRNA 0.51 1 15618744 15618815

Neighbor

gene id symbol gene type direction distance location
trnac-gca_19 NA coding upstream 788 15617885 ~ 15617956 (+)
LOC120561471 NA coding upstream 6162 15604966 ~ 15612582 (+)
LOC120560850 LOC104965067,LOC101155523 coding upstream 55750 15558504 ~ 15562994 (+)
LOC120560525 NA coding upstream 98339 15508922 ~ 15520405 (+)
LOC120560844 LOC104935222,LOC101481450,LOC102294942,LOC106534038,LOC108245882,LOC100710015,LOC107386134 coding upstream 151336 15435741 ~ 15467408 (+)
trnac-gca_21 NA coding downstream 258 15619073 ~ 15619144 (+)
kiaa0825 kiaa0825 coding downstream 192870 15811685 ~ 15938853 (+)
LOC120561380 NA coding downstream 842423 16461238 ~ 16467976 (+)
LOC120561386 NA coding downstream 858683 16477498 ~ 16484029 (+)
LOC120561387 NA coding downstream 868579 16487394 ~ 16492635 (+)
G61867 NA non-coding upstream 45771 15532867 ~ 15572973 (+)
LOC120560848 NA non-coding upstream 73267 15540869 ~ 15545477 (+)
LOC120560847 NA non-coding upstream 78900 15539355 ~ 15539844 (+)
G61782 LOC106527778 non-coding upstream 242742 15374777 ~ 15376002 (+)
G61770 LOC103398011,LOC102234551,LOC103373450,LOC107386141,LOC106527788 non-coding upstream 304166 15306447 ~ 15314578 (+)
G61966 NA non-coding downstream 342786 15961601 ~ 16045838 (+)
G61968 NA non-coding downstream 416636 16035451 ~ 16056705 (+)
G61970 NA non-coding downstream 429568 16048383 ~ 16050693 (+)
G61975 NA non-coding downstream 504385 16123200 ~ 16198871 (+)
LOC120560394 NA non-coding downstream 515779 16134594 ~ 16142799 (+)
LOC120560526 NA other upstream 85948 15518780 ~ 15532796 (+)
zgc:101664 NA other upstream 183809 15431708 ~ 15434935 (+)
spinb spin1,LOC103373448,LOC108245887,LOC101477468,LOC100698355,LOC106527790 other upstream 266119 15249744 ~ 15352625 (+)
nudt18 nudt18,LOC104957221 other upstream 394729 15219137 ~ 15224015 (+)
G61535 LOC103368073 other upstream 535296 15078874 ~ 15083448 (+)
mctp1a mctp1,LOC102782783 other downstream 17983 15636798 ~ 15777141 (+)
fam172a fam172a,LOC102785942 other downstream 324883 15943698 ~ 16099484 (+)
LOC120560890 NA other downstream 849495 16468310 ~ 16475905 (+)
LOC120560897 LOC105925468 other downstream 914101 16532916 ~ 16534175 (+)
LOC120560947 edil3 other downstream 1666833 17285648 ~ 17414595 (+)

Expression


Co-expression Network