trnac-gca_21


Basic Information

Item Value
gene id trnac-gca_21
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15619073 ~ 15619144 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_261
GGGGGTatagctcagtggtagagcatttGACTGCAGATCAAGAGGTCTCCAGTTCAACTCTGGATGCCCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_261 True 72 tRNA 0.53 1 15619073 15619144

Neighbor

gene id symbol gene type direction distance location
trnac-gca_20 NA coding upstream 258 15618744 ~ 15618815 (+)
trnac-gca_19 NA coding upstream 1117 15617885 ~ 15617956 (+)
LOC120561471 NA coding upstream 6491 15604966 ~ 15612582 (+)
LOC120560850 LOC104965067,LOC101155523 coding upstream 56079 15558504 ~ 15562994 (+)
LOC120560525 NA coding upstream 98668 15508922 ~ 15520405 (+)
kiaa0825 kiaa0825 coding downstream 192541 15811685 ~ 15938853 (+)
LOC120561380 NA coding downstream 842094 16461238 ~ 16467976 (+)
LOC120561386 NA coding downstream 858354 16477498 ~ 16484029 (+)
LOC120561387 NA coding downstream 868250 16487394 ~ 16492635 (+)
LOC120561368 LOC104951926 coding downstream 876091 16495235 ~ 16504736 (+)
G61867 NA non-coding upstream 46100 15532867 ~ 15572973 (+)
LOC120560848 NA non-coding upstream 73596 15540869 ~ 15545477 (+)
LOC120560847 NA non-coding upstream 79229 15539355 ~ 15539844 (+)
G61782 LOC106527778 non-coding upstream 243071 15374777 ~ 15376002 (+)
G61770 LOC103398011,LOC102234551,LOC103373450,LOC107386141,LOC106527788 non-coding upstream 304495 15306447 ~ 15314578 (+)
G61966 NA non-coding downstream 342457 15961601 ~ 16045838 (+)
G61968 NA non-coding downstream 416307 16035451 ~ 16056705 (+)
G61970 NA non-coding downstream 429239 16048383 ~ 16050693 (+)
G61975 NA non-coding downstream 504056 16123200 ~ 16198871 (+)
LOC120560394 NA non-coding downstream 515450 16134594 ~ 16142799 (+)
LOC120560526 NA other upstream 86277 15518780 ~ 15532796 (+)
zgc:101664 NA other upstream 184138 15431708 ~ 15434935 (+)
spinb spin1,LOC103373448,LOC108245887,LOC101477468,LOC100698355,LOC106527790 other upstream 266448 15249744 ~ 15352625 (+)
nudt18 nudt18,LOC104957221 other upstream 395058 15219137 ~ 15224015 (+)
G61535 LOC103368073 other upstream 535625 15078874 ~ 15083448 (+)
mctp1a mctp1,LOC102782783 other downstream 17654 15636798 ~ 15777141 (+)
fam172a fam172a,LOC102785942 other downstream 324554 15943698 ~ 16099484 (+)
LOC120560890 NA other downstream 849166 16468310 ~ 16475905 (+)
LOC120560897 LOC105925468 other downstream 913772 16532916 ~ 16534175 (+)
LOC120560947 edil3 other downstream 1666504 17285648 ~ 17414595 (+)

Expression


Co-expression Network