trnaf-gaa_6


Basic Information

Item Value
gene id trnaf-gaa_6
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 38431592 ~ 38431664 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_271
gccgaaatagctcagttgggagagcgttagactgaagatctgaaggtccctggttcgatcccgggtttcggca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_271 True 73 tRNA 0.55 1 38431592 38431664

Neighbor

gene id symbol gene type direction distance location
gda gda coding upstream 127626 38263367 ~ 38303966 (+)
c6h9orf85 csgr18h9orf85,clg9h9orf85,LOC105926787,LOC101078288,LOC103145608,LOC106963215,LOC102236857 coding upstream 173476 38248027 ~ 38258116 (+)
nkx3-1 NA coding upstream 353692 38075066 ~ 38077900 (+)
nkx2.7 NA coding upstream 377620 38050339 ~ 38053972 (+)
stc1 LOC103362328,LOC104965051 coding upstream 404545 38015375 ~ 38027047 (+)
LOC120560325 phyhip,LOC102233080,LOC104946538,LOC100707279 coding downstream 96076 38527740 ~ 38545362 (+)
si:dkey-31c13.1 NA coding downstream 147749 38579413 ~ 38586296 (+)
tcf7l1b tcf7l1,LOC107082304 coding downstream 280621 38712285 ~ 38801716 (+)
tgoln2 NA coding downstream 385065 38816729 ~ 38827785 (+)
LOC120561457 NA coding downstream 400423 38832087 ~ 38837575 (+)
G67765 NA non-coding upstream 512 38417527 ~ 38431080 (+)
G67758 NA non-coding upstream 46968 38377064 ~ 38384624 (+)
G67740 NA non-coding upstream 78756 38245719 ~ 38352836 (+)
G67753 NA non-coding upstream 94554 38336149 ~ 38337038 (+)
G67745 NA non-coding upstream 142856 38288209 ~ 38288736 (+)
G67775 NA non-coding downstream 25929 38457593 ~ 38459811 (+)
G67793 NA non-coding downstream 68186 38499850 ~ 38500671 (+)
G67830 NA non-coding downstream 202107 38633771 ~ 38656197 (+)
G67836 dbnl non-coding downstream 209611 38641275 ~ 38657519 (+)
G67838 LOC104946535,LOC103470542,LOC101482088,LOC107393720,LOC101172587,LOC106915872 non-coding downstream 226940 38658604 ~ 38670657 (+)
nkx6.3 nkx6-3,LOC102787307,LOC104940825,LOC102218504 other upstream 24069 38355603 ~ 38407523 (+)
si:ch211-214j8.12 NA other upstream 108096 38309603 ~ 38323496 (+)
LOC120560165 LOC104964460,LOC103362321 other upstream 702887 37717903 ~ 37728705 (+)
trpm3 trpm3,LOC103470491,LOC103145554,LOC106928040,LOC101476865,LOC100708457 other upstream 1938897 36241579 ~ 36492695 (+)
LOC120560081 NA other upstream 1950281 36477798 ~ 36481311 (+)
G67824 NA other downstream 164147 38595811 ~ 38601821 (+)
G68023 NA other downstream 978558 39410222 ~ 39461478 (+)
LOC120560010 sds other downstream 1430799 39862463 ~ 39878496 (+)
vps33a vps33a other downstream 1702102 40133766 ~ 40164425 (+)
G68173 NA other downstream 1801809 40233473 ~ 40234591 (+)

Expression


Co-expression Network