XLOC_005239 (FO704673.1)


Basic Information

Item Value
gene id XLOC_005239
gene name FO704673.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 14545475 ~ 14551077 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00010089
CAGTTCTTCGTTGGTTACTTCCTGTTTGGTGGCCATATTAACCTGGCCACACCAAACACTCAATGCGAAGTATTGCCAGTATCTGCTGCCTTACCAAGCGTATTTTCTCGGTTTGATCTGCCTGTTGTTATGACCTTTGAGCCTGTTCTTTTTGACTACTGATTTTGGAAGACTGTTTTTGCCTTGTTTGCCTTGGTGGACACTCTGTTTGTTACTTTGAACCTGCCTGCTTTTTGACTACGATTTAGCCTAGtgttttggatttgtttactCTTTACTATTAAACTTCTTGCATTTGGATCCCATCTGTTTCCATGTCGTCACCACCGCCATTGTCACAGAATACTTCGCCTAACATGGATCCAGCAGAAGTTTCTCAGATGCAAGCTGCATTTGCTTATCAAAGTGATGTACTAAAGGGATATCAGGAACAACTGCAGCAATTATCGAACATCAACGATCATCTCACTCAATACATCCGTTCACTTCCTGTTCCTCAAAGCTCTCCGGTAAGACTGGCTTTACCTGACAAATTTGATGGCTTGCCTGAGCAATGTCGTGGGTTTGTTCGCCAATGTAAGATATTCTTTACTAGCCAACCGGACACTTATGCACTAGACACCCAGAAGTGTGCAGTGTTAATGTCGTTGCTAACGGGACGGGCCCTAGATTGGGCCTCAGCGGTTTGGGAAAGCGATGCTGCAATACAAACGTCCTTTAACCATTTCATATCCCAACTGCAGGAAGTGTTTGCTTATCCTGAAGGGGGGCAGGATATTTCTGAACAACTCCTAAATTTAAAGCAAGGATCACGCACGGCAGCTGATTATGCTATTGAATTTAGAACGCTGGCTGCTCAGAGTGGATGGAATGATGTTGCACTCAAAGCAGCATTCAAACAAGGATTAAATACTAAAATTCAAACTGAACTAGCCTGCAAAGCAGTAGACTTAACATACAGTGAATTCATAACCCTGGCCATCAAGATAGATAACTTATTACGTAGCAACTCACGCAGTCATAAACAACGAACAACCCACCTGGAGCAAGCCCAGACAGGCCTGGACACTCCAGAACCCATGCAAATTGCTGCCACTCGTCTCTCTACGGAGGAAAGAGATCGACGTCAGCGTGAAAACCTGTGCTTCTACTGTGGAGAGGAGGATCATCGCACTGCTTCATGCCCTCACAAAGCCAAGAAATCTTCGAGAACCAAATACAGTGTGAGTACCATTGAATTTCCCACTTTTTCTAAGCACAGTTTTCTTCTGAATTGTGAGTTAAGTTATAATACAACCTCTCAATGTGTTTCAGCATTAGTGGATTCTGGGTCAGCAGTTAATATCATAAGTCAGGAACTCACAGACAAATTAAAGATCCCAACATCCCCCTGTGTTCCAGTCATCAATATAACCAGAATTGACAATGGTACCATCGGCTCAGGGATTAAAGCCATCACACAACCTGTATCCCTGAGCATTGGACTTTTCCATGAGGAAACCATCACATTCTATGTGATCCCCTCTTGTAAATATGAAGTTATTTTGGGTCACCCATGGCTTACCATCCATGACCCGACCATTTCCTGGAATCAAGGTGAACTCACACACTGGTCCACTCATTGTCAACAACGATGCTTTTCCAAAATATTGTCTCTACCATGTTTGTCCACCAGCATTGAAAGCCCAGAGGTCCACTCACAAGTGACGTTACCACAGCCCTATAGAGAATTTGCAGAGGTATTCAACAAATCTAAAGCAGCCCAACTACCACCTCATCGATCTTGGGATTGCGCTATTGAACTGCTACCCAATATGTCCCCACCTAAAAGCAAAATTTATCCACTGTCTCGTCCTGAAACTCAAGCCATGGAAACATACATCGAGGAGGCCCTATCTTCTGGTTACATTCGACCCTCTACTTCCCCCGCAGCAGCAGGATTTTTTTTCATAGAGAAAAAGGATGGAGGACTCCGTCCATGTATCGACTACCGAGGATTGAATAACATCACTGTCAAATATCGTTACCCTCTTCCCTTGGTGCCTCCTGCCCTTGAACAACTACGTGAAGCCCGTATCTATACTAAACTTGATCTCAGAAGTGCTTATAACCTTATCCGTATTCGAGAGGGAGACGAATGGAAAACCGCATTCctgaccactagggggcactatgaaTACCTCGTTATGCCTTATGGCCTTGCTAACTCCCCAGCAGTCTTCCAGTCATTCATAAATGAAGTTTTTAGAGATTTGCTGAACAAATGTGTCATTGCTTATATAGATGACATTTTGATTTATTCCCCTAACCTAGAACAACACATCAAAGACGTTAGGACTGTTTTGACACGATTACAAGAAAATCAACTCTATGCTAAGCTGGAGAAGTGTGAATTCCACATGTCCAAGACCTCCTTCCTAGGATACATTATCAGCCACCACGGAGTGGAAATGAATAACACCAAGGTTCAGGCAGTCACTGGTTGGCCTCTCCCCAAAACAGTGAAAGAACTACAAAGATTTCTAGGGTTTGCCAATTTTTATCGCCGATTCATAAGAAACTACAGCCTAATTTCGGCCCCCCTCACCTCACTGCTAAAGGGTAAGCCATCTAAGTTGAAATGGAATCCAGAAACAGTCAAATCGTTTGAGAAACTTAAGACCAGCTTCACCACCGCACCCATTCTGAAACACCCCAACCCAGAGCTACCCTTTGTTGTTGAAGTGGATGCATCCGACTATGGCATTGGGGCAGTCTTATCACAACGCCATGGTAACCCAGGTAAACTCCACCCCTGTGCTTATTTTTCTCGCAAATTGACGGCAGCTGAAAGAAACTATGACGTAGGTAACAAGGAACTACTTTCCATGAAGGCAGCACTGGAAGAATGGCGCCACTGGCTAGAAGGAGCTGTCCATCCCTTCCAGATTATCACAGACCACAAAAACCTTGAGTATATCAAAAGTGCCCGACGACTAAACCCTAGACAGGCTCGCTGGTCTTTATTTTTCACCCGTTTCAATTTTACAGTAACCTATCGCCCAGGCACCAAGAACCATAAGGCAGATGCCCTTTCTCGCAGATATGACCAAGGGCAATTGGATCAAACCCCAGTATCAATTCTTCCACCATCTGTAGTCATAGCCCAAATCAGCTGGGATATCATGGAAGAAATACAAAGAGGCCAACAAGATGATCCACCACCTCCTGAATGCCCCCCAAATCGCCAATATGTCCCACAAACACTCAGACTACGAATTATGCAGTGGGTACACAACTCTCTAAGTTCAGGACACCCAGGCATCTCTCGTACATTGAACTTGGTACGCAATGCATTCTGGTGGCCTAAGATGAACCAAGATATTACTACGTTTGTCAAGTCCTGTGCAGTCTGCGCCCAGTCAAAAACACCACGGGAGCTGCCATCCGGATTACTTCAACCACTCCCCATCCCTCATCGTCCATGGTCACACTTATCAATAGATTTCGTCACCGATCTACCAAACTCCAATAACTACACAACGATACTCGTTATCATAGACCGCTTTTCTAAAGCCTGCAGACTGATCCCACTTAAGGGACTACCCACAGCCATGGAAACTGCCCTAGAACTATTCCAACACGTATTCAGAGTGTATGGCATCCCAGAAGACATAGTATCTGACAGAGGCCCCCAATTCACTTCCAAAGTATGGAAAGCATTTTGCAAACAACTAGACATCAACGTCAGCCTCACTTCAGGTTATCATCCTGAATCTAATGGACAAGTGGAAAGATTAAACCAAGAAATTGGACGCTATCTCAGAACCTACTGCAGCAGAGAACAAGACAAATGGAGCAACTTTCTGCCATGGGCGGAATATGCTCAAAACTCTCTCACCCATTCATCCACGGGACTAACTCCGTTTCAATGCATCCTAGGCTACCAACCTCCCATGTTCCCCTGGTCTGGTGAACCTTCTATGGTACCATCAGTGGATGACTGGGTCCAACGCAGTGAAGAAGTATGGAACAGCGCTCATGTGAGACTTCAAAGAGCCATTCGAACCCAAAGGATTAATGCAGACCAAAGACGGCGTCCAAATCCTAACTATCAACCTGGCCAGAGAGTCTGGTTATCAACCCGAGACCTCAGACTACGACTACCTAGCAGGAAGCTATCACCAAGGTATGTAGGACCCTTCAAAATTCTGAAACGAATTAACAATGTCACATACCGTTTAGAGCTTCCTGCTGATTACCGCATCTCCCCTTCTTTTCATGTTTCCCTCCTAAAACCGGTCCACCCAACGTCTGACTCCGGCACATCAAACCCTGAACCCCCTCCACCTTTGGAAATTGAGGGAGCACCTGCATATGCAGTTAACGAGATTTTGGACTCTCGCCGCAGAAGGGGTCAGTTACaatacttggtggactgggaaggctaTGGACCAGAGGAGAGGTCTTGGGTTCCGTCGAAGGATATACTGGACCCATCTCTTACCCAGAACTTTCACCAACGGTACCCCAATCGCCCAGCACCACGACCCAGAGGTAGACCTAGAAGATGTACACCCGGAGGTGTTCCTAGAGGAGGGGAATCTGTAACAAACAGAACTGACAACCACTCATCCAACCTGCAGAGGGAGCCCTCACCGAAATTCTGACTGTCAGTTCTTCGTTGGTTACTTCCTGTTTGGTGGCCATATTAACCTGGCCACACCAAACACTCAATGCGAAGTATTGCCAGTATCTGCTGCCTTACCAAGCGTATTTTCTCGGTTTGATCTGCCTGTTGTTATGACCTTTGAGCCTGTTCTTTTTGACTACTGATTTTGGAAGACTGTTTTTGCCTTGTTTGCCTTGGTGGACACTCTGTTTGTTACTTTGAACCTGCCTGCTTTTTGACTACGATTTAGCCTAGtgttttggatttgtttactCTTTACTATTAAACTTCTTGCATTTGGATCCCATCTGTTTCCATGTCGTCACCACCGCCATTGTcacaaatatgtttattataaGCATAAAATGTGTTCTAATTTTTCAGATTAGccaggggggtttgggtggttcagAAGACTCACCCCTCACcaacaaaggtccagaatttgtcctatacatgagctcatttgtaatactttgactgctatgccatcataaataataaaaacaatccattgaaaaaggctttaagactgAACAGAATCAATTGTCAGCTGTTGCTTCGGTGGGACTGtaatctgatgtaagagaagtcttctttcactactgtattgttgttaaacaTGGAAAACTTTTCAcaggtaacttttattctaaatcttggaccttatttctgaaataaaaataagcaataaaAAGGCATGAAGTACCAGAAACggaccatattaaattaatttgaatatattttgtctattgttgatatccaggaattttcaaaagtactttttttttattaaagaggctaaaaaaattctgaagaattcattattattgtattattattattattattattatgttttaattatttttttttatggaaattgccaaattgtgactgaggacagttgaagGCGAGTTTGTTTTTTGTCCAATAAATAATAGTAGGctac

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000112601

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00010089 True 5603 mRNA 0.44 1 14545475 14551077

Neighbor

gene id symbol gene type direction distance location
XLOC_005238 avl9 coding downstream 334182 14166036 ~ 14211293 (-)
XLOC_005237 NA coding downstream 401316 14138286 ~ 14144159 (-)
XLOC_005236 aclyb coding downstream 467405 13973058 ~ 14078070 (-)
XLOC_005235 klhl11 coding downstream 579291 13961268 ~ 13966184 (-)
XLOC_005234 dbf4b coding downstream 640168 13888670 ~ 13905307 (-)
XLOC_005240 NA coding upstream 288710 14839787 ~ 14840559 (-)
XLOC_005241 neurod2 coding upstream 369011 14920088 ~ 14922955 (-)
XLOC_005242 pkmyt1 coding upstream 414510 14965587 ~ 15002619 (-)
XLOC_005243 NA coding upstream 566810 15117887 ~ 15120113 (-)
XLOC_005244 NA coding upstream 574332 15125409 ~ 15126049 (-)
XLOC_005224 NA non-coding downstream 1439252 13102866 ~ 13106223 (-)
XLOC_005222 BX572641.1 non-coding downstream 2210144 12335216 ~ 12335331 (-)
XLOC_005214 NA non-coding downstream 3772529 10769131 ~ 10772946 (-)
XLOC_005200 NA non-coding downstream 4415573 10124660 ~ 10129902 (-)
XLOC_005246 NA non-coding upstream 691490 15242567 ~ 15244000 (-)
XLOC_005247 NA non-coding upstream 894497 15445574 ~ 15450258 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G463566 NA unknown CI01000325 null 2563155 ~ 2563735 (+)