XLOC_005244



Basic Information


Item Value
gene id XLOC_005244
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 15125409 ~ 15126049 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00011108
TTCGCCAAGCACTGCAACAAGTCTCACAGATGTAGAATCACACAACTATGCAACAAGTCTCACAGATGTAGAATGACACGACTACAGACAGGGTTCTTATGGTTGTGAAAAACCTGGAAAGactttgacatggcattttccagaccTGGGACACATTGTGTGGATTTTAATGCTAAGCTGGTTGGCAagggggtgtttcccagtaatgggttgcacctggaagggcatccgctgcataaaacacatgatGATAAGTTGACAAGTTCAttcaacccctgattaataaagggactgagccgaaaagaaaagaataaatggTTGACAAGGTAGCCTTGACTTACATTGTCTAGTTCACTGGCGTTATGCTGGTTGGAAATGTAGCCAAGCCTCAAGCATATACTTCACTTGTGTTGAGGCATTCAGCAAGGTAGCCCAGGCATACAGTCTAGTTTACAATAGTGTTATACCCATTGGTAAGGAGGTGCACAAAGATAGAAGAACATGTAGTCAAACATATCCTGGT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00011108 True 523 lncRNA 0.43 2 15125409 15126049

Neighbor


gene id symbol gene type direction distance location
XLOC_005243 NA coding downstream 5296 15117887 ~ 15120113 (-)
XLOC_005242 pkmyt1 coding downstream 122790 14965587 ~ 15002619 (-)
XLOC_005241 neurod2 coding downstream 202454 14920088 ~ 14922955 (-)
XLOC_005240 NA coding downstream 284850 14839787 ~ 14840559 (-)
XLOC_005239 FO704673.1 coding downstream 574332 14545475 ~ 14551077 (-)
XLOC_005245 sult1st6 coding upstream 71808 15197857 ~ 15205087 (-)
XLOC_005246 NA coding upstream 116518 15242567 ~ 15244000 (-)
XLOC_005247 NA coding upstream 319525 15445574 ~ 15450258 (-)
XLOC_005248 hexim1 coding upstream 439295 15565344 ~ 15567104 (-)
XLOC_005249 acbd4 coding upstream 442712 15568761 ~ 15620090 (-)
XLOC_005237 NA non-coding downstream 981250 14138286 ~ 14144159 (-)
XLOC_005224 NA non-coding downstream 2019186 13102866 ~ 13106223 (-)
XLOC_005222 BX572641.1 non-coding downstream 2790078 12335216 ~ 12335331 (-)
XLOC_005250 NA non-coding upstream 731683 15857732 ~ 15859869 (-)
XLOC_005255 CABZ01044816.1 non-coding upstream 1367303 16493352 ~ 16493468 (-)
XLOC_005258 FO704724.2 non-coding upstream 1446146 16572195 ~ 16572309 (-)

Expression



Co-expression Network