G142134


Basic Information

Item Value
gene id G142134
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 1869549 ~ 1870509 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU168162
gtgtgtgtgtgtgtgtgtgtacctggtggttagtgtgtgttgtacaggCTGTAGAGGTTGtcgttagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacctggtggttagtgtgtgtgttgtacaggcCGTTGAGATTAGCCTCGTGGCAGTTCTTGTACCACCAGCCCCCTCTGTAAGACATGGAGCAGCGTGTGATGAAGGGCTGGGGGTCGCGGTCGAACGTGGAGAACGGCCGCTTATCGTGGTACTTCAGAGAGTCGCCTGTAAAACCACGTCATCATAACGACACGTTACACTCAGTGACACGTTacttacacacacctttatcAGACACACCACAAACTAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168162 True 352 lncRNA 0.51 2 1869549 1870509

Neighbor

gene id symbol gene type direction distance location
slc44a4 NA coding upstream 186756 1647724 ~ 1682793 (+)
ehmt2 ehmt2 coding upstream 223000 1622766 ~ 1646549 (+)
LOC113523867 tmem42,LOC108274871,LOC103045080,LOC107394544 coding upstream 271791 1590858 ~ 1597758 (+)
LOC113523893 mterf1 coding upstream 329082 1534867 ~ 1540467 (+)
LOC113523877 NA coding upstream 364545 1496473 ~ 1505004 (+)
LOC113524921 NA coding downstream 103023 1973532 ~ 1998149 (+)
LOC113524922 NA coding downstream 135557 2006066 ~ 2033649 (+)
LOC113524923 NA coding downstream 166366 2036875 ~ 2053264 (+)
LOC113545587 LOC108274833 coding downstream 314214 2184723 ~ 2195601 (+)
lgals17 LOC108274834 coding downstream 336414 2206923 ~ 2217442 (+)
G142122 NA non-coding upstream 13199 1851472 ~ 1856350 (+)
G142054 LOC108274837,LOC108274818,LOC108274817 non-coding upstream 37064 1819530 ~ 1832485 (+)
G142056 LOC108274837,LOC108274817,LOC108274818 non-coding upstream 49769 1784404 ~ 1819780 (+)
G142053 LOC108274818,LOC108274817,LOC108274837 non-coding upstream 73639 1762622 ~ 1795910 (+)
G142113 LOC108274837 non-coding upstream 81113 1784777 ~ 1788436 (+)
G142157 NA non-coding downstream 32654 1903163 ~ 1904434 (+)
G142164 atf6b non-coding downstream 77372 1947881 ~ 1950347 (+)
LOC117597929 LOC108274864,LOC108274865 non-coding downstream 128747 1999256 ~ 2003137 (+)
LOC117598183 NA non-coding downstream 148300 2018809 ~ 2022140 (+)
G142301 NA non-coding downstream 181949 2052458 ~ 2052691 (+)
LOC113523891 ehmt2 other upstream 246759 1615143 ~ 1622790 (+)
G142093 LOC108274838 other upstream 256213 1611511 ~ 1613336 (+)
dus3l dus3l other upstream 309639 1548257 ~ 1559910 (+)
G141825 LOC108274854,LOC108279645 other upstream 659676 938715 ~ 1209873 (+)
LOC113524920 NA other downstream 184522 2055031 ~ 2085878 (+)
LOC113545687 NA other downstream 198729 2069238 ~ 2183053 (+)
LOC117597926 NA other downstream 399541 2270050 ~ 2271586 (+)
LOC117598179 NA other downstream 408570 2279079 ~ 2279887 (+)
LOC117598174 NA other downstream 417589 2288098 ~ 2291206 (+)

Expression


Co-expression Network