XLOC_005247



Basic Information


Item Value
gene id XLOC_005247
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 15445574 ~ 15450258 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00011110
TCATGGGTGATCACTCCTGTGGGTAGCCCCAGTCCTGAGATGGGGGCCCATGGGTGAAGGTGAAGGAACCTTTTTGGTGTTGGTGCTGTTTTGTCAGAGGGCTGTGGGACACTTCTGATTCAAAATCCGAGCCGACGAGCCATCGGGATCTAGTTTAGTGTTTGTCTTTTTAAGAgaattattttgaataattttttgtgTTTACTTGTGTCTCCTTTCTGCTCCTTAAACTGTAAAAAGAGACAATTCTGGGtgacattttatatttttcctgggttt

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00011110 True 279 lncRNA 0.43 2 15445574 15450258

Neighbor


gene id symbol gene type direction distance location
XLOC_005246 NA coding downstream 201574 15242567 ~ 15244000 (-)
XLOC_005245 sult1st6 coding downstream 240487 15197857 ~ 15205087 (-)
XLOC_005244 NA coding downstream 319525 15125409 ~ 15126049 (-)
XLOC_005243 NA coding downstream 325461 15117887 ~ 15120113 (-)
XLOC_005242 pkmyt1 coding downstream 442955 14965587 ~ 15002619 (-)
XLOC_005248 hexim1 coding upstream 115086 15565344 ~ 15567104 (-)
XLOC_005249 acbd4 coding upstream 118503 15568761 ~ 15620090 (-)
XLOC_005250 NA coding upstream 407474 15857732 ~ 15859869 (-)
XLOC_005251 kcnj19b coding upstream 612302 16062560 ~ 16084835 (-)
XLOC_005252 hectd2 coding upstream 882158 16332416 ~ 16380961 (-)
XLOC_005240 NA non-coding downstream 605015 14839787 ~ 14840559 (-)
XLOC_005237 NA non-coding downstream 1301415 14138286 ~ 14144159 (-)
XLOC_005255 CABZ01044816.1 non-coding upstream 1043094 16493352 ~ 16493468 (-)
XLOC_005258 FO704724.2 non-coding upstream 1121937 16572195 ~ 16572309 (-)
XLOC_005260 BX465840.1 non-coding upstream 1148485 16598743 ~ 16598857 (-)
XLOC_005263 BX465840.2 non-coding upstream 1204423 16654681 ~ 16654795 (-)

Expression



Co-expression Network