si:ch73-233f7.1 (si:ch73-233f7.1,LOC108274507,LOC107660897,LOC107588310,LOC107596359,LOC107754489,LOC108430952)


Basic Information

Item Value
gene id si:ch73-233f7.1
gene name si:ch73-233f7.1,LOC108274507,LOC107660897,LOC107588310,LOC107596359,LOC107754489,LOC108430952
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 10537251 ~ 10547929 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU173183
CTATCACGGGTTCAGAGGGAATTAACAGCGCGCGGAATCAGTCCGTTTTAACTCGGAACAAACACGAGCGGCTTTGCTCTCCCTCCCCGCTGCGCCTCGGCCCACGAAAACGGTACAAGACATGAGCGTGTGGACTTGAATTTAGTTCACTCTCAAAGAAATCCAATCATTCAAACATTTGGCCACAAGATGGCAGTCGTAAGTCGCACACCTGATAGTCAAACAAGGAAATGTTGGGTATTGGTTCAAATCAGTTAAATTTGCTTATTTGGGTGACGCTTTGAAACGATTTACAACTGAGACAGGACACAGCTGAAGAGATTAGCGTTAAAGGCCTTTAAGGACCCAAccgtggcagcttggtggtgcaaTTACAGTTTGTAATTTGCAATtacaaccttccgatcagtagccaaaagccttaaccactttagtttgttttctgaatttcttcATCCAGAAACGAATATGAATCTAAATATTTGTTATTGCTAGTAAATTGTATTTTGTGTTGCAGTTAAAACAAGACAATACTAACTGGGCTCTTACCAAGAACCAAACTTCAACTTTGAAAAgTTATAACTCAATTAATATGGATGGCACCCTCATGAGGAAGGTCATGCAGACTGATTCTGAAAACTATGTAAGTCCAGTGGCTGCAGGACAGTACTGGACGTGGGGAACACGAATGAGAGAGTGCAAGATGTCTTCCCCTGTGACGGGCCTCCCTGAGCGGGCATGGACACCCCGCTACACCCCAACAAAAACTCCCCAACAGCAGCAGCCTTCAGGTCAGTCACATGGTCATCCTCCACCTGACTACCAACATAATGTCTACATCCCTGGGACTCCATCTGCCCTCTGTACTCTCCGGCCCAGTAATCGCAGTGAGCTGGATGTCCACAACACTTTCTCCACCTTTGGCAAGAAGCGCAAGTTCATCTCTCCCAGCAGTTATGACCTAAGGGATGAAACAGGTACTGAGGTCATCAATAATGACCTGTATAATGAATAGTGAAGAAGATTGGAGAGAGACTGCAACAGCATGCCAGATGATGGACAGAACATGTGGAGGGGAAGCAAATGTGGTGAAAGGAAAAAGCAGTGAAGCAGAGAAGAACCTAGAAGACCAGACATATTAATTGCAACCAAAGCAGAGCCTATTTATCCAAACCATACTGCTCTAATTTTACAGCTCCATTATGTTCCTGAACAGGGTGGTATACTTCCCATGACCCAATGTGCCCTTAGAGACACTTTTGGTTTATGTCTGtcatgtttgtatgtttgtggcACATAAAGCATGAGCCAGAATAAGAAAGCTTTAACCTCCAGTAGGGATTGGAAGAACTGGCTTAGTGTCAGAGATTAACATCTAACAGTTAAGGCCATCTAGATGAACCTGAACATAGAATGATAAATTAAGGAAGGTGGGAGGTCTGGTTACCATTTGTGCAATGTTTCACATATCTATGTCAGTtctccagtttttttttgcaaaaacatgATGGTAGGTGAATTGCCTAGTCTAAGATTTAAAAATGCCTCTATAAATAttcctaggtgtaaatgagtgttcCAGTATAAAAGCTCTAGATCTaccatgatcctgaccagaGAAAAGTGGTTACCCTGAGTAAGGATGAATGAgcgaatgaataaatgaaattaagaaAGGAAAATTGaagttataattttttattatacaacATGTTGATAGTGAACAGACTAATGATTTGGTTTACACTGAttacactcttaggaaaaaaaaaacctaaaggattctttgtttatttatgaaagGTTCTATGCAGACCCTTACAACCTCATTGTTCCAATCAGAAAGGGCTCCAAGCAGAACTAATGGAAGCTAAGAAACTTTGAAGAGCTCAACAAAGTATCCTTAATGAACTTATGAGGGggtctttttttctaagagtgtagttTATTCTTCTGTGTGAATAATGGGCTGAGGAATCACTTACTACTGTTTTGTTAGGACAACTTGGTGCATAGTTCAAAGATATGAAGGTCAATGGTAACAAACAGCAACAGTGAATCACATTGACTCcatgccattattattattattattattattattattatgctacaATTTTTGACAATCATATTAGGTAAACTGTGAGCATTACATATCCTTTGGCCACAGTGTGAATTTTCTGTCTTAGCAGAATCATCAGGCCATAGCCTTGCATTGATTGGTTGCTCAGTTAAAGAGGTGAATCAGTCTAACATGGTTATTGTTCAGTG
>XM_026919795.2
CTTACGACGCCCCCCTCCCCCCTTCTCCATTCTTCCAGACCCTCTTCTCACCCATTCCTCAAAAACCTCCAATACGCTGTAAAATCAAAGTGCGAGCCTCCCCCTGCTCACACACAAcgcacccacccacccacacacacacacacgcgcgcgcgcgcgggGAGCACAGCGCTGAGAGACACCTCGCGCCTCTCTGAAGGATCTTGCcacttttttctgaaattatttattcagaGGTTCCACGTAGACATGATGCCATAATGCCAACTATTaaacatcttatttatttttaaactatttttcacttttcacaaCTTATGCGTCTGGCCACCTAGGATTTTGGGCATAAACGAGATGGATCAAGGGCTCGAGAGGAGGCAATGGACATCAGCGTGGTCAGCTTTTCGCCTGCTTATGTGTATGTGCGCGCTGGACCGGGTGCTCGCCCAGATTCGCTACTCTGTTCTCGAGGAGCGCGAGCACGGCGCATTTGTCGGTAACATTGCGGAGGACTTAGGCTTGGATGTCGCCAGGTTATCCGCCAGGCGATTCCGCATAGTGTCCGGAGCTAGGAAACAGTATTTAGAGGTCAATTTGGAAAACGGGATTTTGTTTGTGAACGAGAAAATCGACCGAGAGGAGTTATGCGAACAGAGTCCGGTTTGTTTCTTGCACTTGCAGGTGGTCATTGAAAACCCACTGGAACTGTACCGAATGGAAGTTGAGATCATAGACGTTAACGACAACGCTCCAAGCTTTCCGTGGAGCGAGTTCAATCTAGAGATAACCGAGTCTGCCGCGCCGGGCTCACGGTTCCCGCTCGAGAGCGCGCAAGATCTAGACGCGGGATCCAACTCGCTCCGCTCCTACCTGCTGAGTGCTAACCAACACTTTGTGCTGGACGTGCAGACACGCAACGACGGGAGCAAGTTCGCAGAACTCGTGCTGGAGTCTCTCTTAGACCGGGAGAAGCAGAAAATGCACGAAATGGTCCTAACCGCTGTGGACGGCGGCTCTCCTCTGCGCTCGGGCACTGCTCAGATCATGGTTACAGTACTGGATGCGAACGATAATGTCCCTGTATTCGACAGATCCGTTTACCGGGTGAGCCTGGTGGAGAACGCACCGAGAGGAACGCTTGTGCTCAAGCTCAACGCCACGGATCTGGACGAAGGCTCTAACGGCGAGATCGTCTATTCATTCAGCGGCCATGCGCCCTTGAAAGTGCGCGAGCTGTTCAGTGTAGATTCTTTTTCGGGCGAAATTCGGGTGAAAGGGATTGTAGACTACGAAAAAGCCAGCGTCTACGAGCTCTATGTGCAGGCTAAAGACAAGGGTCCCTCTGCTGTGGCCGTGCACTGTAAAGTGCTTGTCGATATACTGGACGTGAACGACAACGCGCCAGAGGTCATCCTGACCTCTGTCTCCACACCTGTTCAGGAAGACGCGCCTCCGGGGACCGTGATAGCTGTGATCAGTGTCATGGATCGTGACTCCGGGGAAAACGGAGCAGTGGACTGTCAGATCCCCAGCCACGTCCCCTTTAGGCTTCACTCGTCCTTTAAAAACTACTACACTCTGGCGACTAGCGAATTTCTGGACAGAGAGTCGGTAGCCGAATACAACATCACTCTCACGGCGCGCGATTTAGGCTCACCACCGCTCTCCACCGGGAAAACTATTCATGTTCTTGTGTCGGATGTTAATGACAATCCTCCGCGCTTCCTTCAGCCGTCCTACACCGTCTATGTGACCGAGAATAACGCACCGGGCGCTTCCATTTGTTCTGTGAGCGCAGTTGATCCGGACTCTAACCAGAACGCTTATCTATCCTACTCTATTCTGGAGGGTCAGATAAGGGGCATGCCTGTGTCCACGTATGTTTCTATTAACTCGGACAATGGCAACATTTACGCTCTTCGCTCCTTCGACTACGAGCAGCTCCGCAACTTTCAGATCCGAGTTCAGGCGCGGGACGCCGGTTTCCCGCCGCTGAGCGGAAACGTGACTGTCAGCGTGTTTGTGTTGGACCAGAACGACAACGCACCACTAGTCGTTTCCCCGCTGCCGAAGAACGGCACGGCGGCTACTGAGACGGTGCCGAGGTCGGCGGACGCAGGCTACCTCGTAGCAAAAATTACAGCACTGGACGCGGACGCCGGACAAAACTCTCGCCTCTCGTACCAAGTGCTGCACGCCACTGACCCGGGGCTTTTCAGCATCGCGCTTTACACGGGTGAAATTCGGACCATCCGCCGCTTTGTAGACAAAGACGCCACAAGGCACAGACTCGTTATACTGGTCAAGGACAATGGGCAACCCTCTCTATCGGCCACCGTATCCCTCATTCTGACGCTAGTGGACGGCGTGCCGGAGTCGCTGTCAGACCTGGATGACCATGCTCTCAGCCGCCGAGCGCCTTCTAACCTCGCCCTCTATCTGATCGTCTCGCTGAGTGTGGTATCGCTCATCTTCCTAGTAGCCATCATCGTACTGGCGGCACTGAAGTGCTACAAAGACCGGGACTGTCCTGGAGGTTTCGGTCTGTCCTCTATTGGTGCTGCGTGCTGCACTCTCGAATCCGAGCCGCCCGCCGAAGCATGCAAAAAGTCCAACTTGAATCTGCAGATTTCAACCGGGACGAAGGTGCCCACGAACTGTGTGGAGAGCAGTACCGGAACCACGGCTCAGAACTACTGCTACAAGGTGTGCCTAACACCCGAATCAGCCAAGAGTGACTTCATGTTCATGAAGTCGTACAGTCCGAGCACGCCGAGAAATAACGCGGCTAAAGAGGCTGAAAATCTGGCGTGGAGCTCACAGAGCCGCGGCCCTTCAGCGAATAACGGAGCGACAACTCCTAACGAGTTAAAACAAGACAATACTAACTGGGCTCTTACCAAGAACCAAACTTCAACTTTGAAAAgTTATAACTCAATTAATATGGATGGCACCCTCATGAGGAAGGTCATGCAGACTGATTCTGAAAACTATGTAAGTCCAGTGGCTGCAGGACAGTACTGGACGTGGGGAACACGAATGAGAGAGTGCAAGATGTCTTCCCCTGTGACGGGCCTCCCTGAGCGGGCATGGACACCCCGCTACACCCCAACAAAAACTCCCCAACAGCAGCAGCCTTCAGGTCAGTCACATGGTCATCCTCCACCTGACTACCAACATAATGTCTACATCCCTGGGACTCCATCTGCCCTCTGTACTCTCCGGCCCAGTAATCGCAGTGAGCTGGATGTCCACAACACTTTCTCCACCTTTGGCAAGAAGCGCAAGTTCATCTCTCCCAGCAGTTATGACCTAAGGGATGAAACAGGTACTGAGGTCATCAATAATGACCTGTATAATGAATAGTGAAGAAGATTGGAGAGAGACTGCAACAGCATGCCAGATGATGGACAGAACATGTGGAGGGGAAGCAAATGTGGTGAAAGGAAAAAGCAGTGAAGCAGAGAAGAACCTAGAAGACCAGACATATTAATTGCAACCAAAGCAGAGCCTATTTATCCAAACCATACTGCTCTAATTTTACAGCTCCATTATGTTCCTGAACAGGGTGGTATACTTCCCATGACCCAATGTGCCCTTAGAGACACTTTTGGTTTATGTCTGtcatgtttgtatgtttgtggcACATAAAGCATGAGCCAGAATAAGAAAGCTTTAACCTCCAGTAGGGATTGGAAGAACTGGCTTAGTGTCAGAGATTAACATCTAACAGTTAAGGCCATCTAGATGAACCTGAACATAGAATGATAAATTAAGGAAGGTGGGAGGTCTGGTTACCATTTGTGCAATGTTTCACATATCTATGTCAGTtctccagtttttttttgcaaaaacatgATGGTAGGTGAATTGCCTAGTCTAAGATTTAAAAATGCCTCTATAAATAttcctaggtgtaaatgagtgttcCAGTATAAAAGCTCTAGATCTaccatgatcctgaccagaGAAAAGTGGTTACCCTGAGTAAGGATGAATGAgcgaatgaataaatgaaattaagaaAGGAAAATTGaagttataattttttattatacaacATGTTGATAGTGAACAGACTAATGATTTGGTTTACACTGAttacactcttaggaaaaaaaaaacctaaaggattctttgtttatttatgaaagGTTCTATGCAGACCCTTACAACCTCATTGTTCCAATCAGAAAGGGCTCCAAGCAGAACTAATGGAAGCTAAGAAACTTTGAAGAGCTCAACAAAGTATCCTTAATGAACTTATGAGGGggtctttttttctaagagtgtagttTATTCTTCTGTGTGAATAATGGGCTGAGGAATCACTTACTACTGTTTTGTTAGGACAACTTGGTGCATAGTTCAAAGATATGAAGGTCAATGGTAACAAACAGCAACAGTGAATCACATTGACTCcatgccattattattattattattattattattattatgctacaATTTTTGACAATCATATTAGGTAAACTGTGAGCATTACATATCCTTTGGCCACAGTGTGAATTTTCTGTCTTAGCAGAATCATCAGGCCATAGCCTTGCATTGATTGGTTGCTCAGTTAAAGAGGTGAATCAGTCTAACATGGTTATTGTTCAGTGAACAACATGTACAATACTAATATGTATGCAAACTGTGTAACTGACTCACGGCGTCTAGCGCAGTATATCACTGTATAAATTctgaaaataaagtatttttttctgagtATAATAGACTATGtctattataaattata
>XM_026919796.2
CTTACGACGCCCCCCTCCCCCCTTCTCCATTCTTCCAGACCCTCTTCTCACCCATTCCTCAAAAACCTCCAATACGCTGTAAAATCAAAGTGCGAGCCTCCCCCTGCTCACACACAAcgcacccacccacccacacacacacacacgcgcgcgcgcgcgggGAGCACAGCGCTGAGAGACACCTCGCGCCTCTCTGAAGGATCTTGCcacttttttctgaaattatttattcagaGGTTCCACGTAGACATGATGCCATAATGCCAACTATTaaacatcttatttatttttaaactatttttcacttttcacaaCTTATGCGTCTGGCCACCTAGGATTTTGGGCATAAACGAGATGGATCAAGGGCTCGAGAGGAGGCAATGGACATCAGCGTGGTCAGCTTTTCGCCTGCTTATGTGTATGTGCGCGCTGGACCGGGTGCTCGCCCAGATTCGCTACTCTGTTCTCGAGGAGCGCGAGCACGGCGCATTTGTCGGTAACATTGCGGAGGACTTAGGCTTGGATGTCGCCAGGTTATCCGCCAGGCGATTCCGCATAGTGTCCGGAGCTAGGAAACAGTATTTAGAGGTCAATTTGGAAAACGGGATTTTGTTTGTGAACGAGAAAATCGACCGAGAGGAGTTATGCGAACAGAGTCCGGTTTGTTTCTTGCACTTGCAGGTGGTCATTGAAAACCCACTGGAACTGTACCGAATGGAAGTTGAGATCATAGACGTTAACGACAACGCTCCAAGCTTTCCGTGGAGCGAGTTCAATCTAGAGATAACCGAGTCTGCCGCGCCGGGCTCACGGTTCCCGCTCGAGAGCGCGCAAGATCTAGACGCGGGATCCAACTCGCTCCGCTCCTACCTGCTGAGTGCTAACCAACACTTTGTGCTGGACGTGCAGACACGCAACGACGGGAGCAAGTTCGCAGAACTCGTGCTGGAGTCTCTCTTAGACCGGGAGAAGCAGAAAATGCACGAAATGGTCCTAACCGCTGTGGACGGCGGCTCTCCTCTGCGCTCGGGCACTGCTCAGATCATGGTTACAGTACTGGATGCGAACGATAATGTCCCTGTATTCGACAGATCCGTTTACCGGGTGAGCCTGGTGGAGAACGCACCGAGAGGAACGCTTGTGCTCAAGCTCAACGCCACGGATCTGGACGAAGGCTCTAACGGCGAGATCGTCTATTCATTCAGCGGCCATGCGCCCTTGAAAGTGCGCGAGCTGTTCAGTGTAGATTCTTTTTCGGGCGAAATTCGGGTGAAAGGGATTGTAGACTACGAAAAAGCCAGCGTCTACGAGCTCTATGTGCAGGCTAAAGACAAGGGTCCCTCTGCTGTGGCCGTGCACTGTAAAGTGCTTGTCGATATACTGGACGTGAACGACAACGCGCCAGAGGTCATCCTGACCTCTGTCTCCACACCTGTTCAGGAAGACGCGCCTCCGGGGACCGTGATAGCTGTGATCAGTGTCATGGATCGTGACTCCGGGGAAAACGGAGCAGTGGACTGTCAGATCCCCAGCCACGTCCCCTTTAGGCTTCACTCGTCCTTTAAAAACTACTACACTCTGGCGACTAGCGAATTTCTGGACAGAGAGTCGGTAGCCGAATACAACATCACTCTCACGGCGCGCGATTTAGGCTCACCACCGCTCTCCACCGGGAAAACTATTCATGTTCTTGTGTCGGATGTTAATGACAATCCTCCGCGCTTCCTTCAGCCGTCCTACACCGTCTATGTGACCGAGAATAACGCACCGGGCGCTTCCATTTGTTCTGTGAGCGCAGTTGATCCGGACTCTAACCAGAACGCTTATCTATCCTACTCTATTCTGGAGGGTCAGATAAGGGGCATGCCTGTGTCCACGTATGTTTCTATTAACTCGGACAATGGCAACATTTACGCTCTTCGCTCCTTCGACTACGAGCAGCTCCGCAACTTTCAGATCCGAGTTCAGGCGCGGGACGCCGGTTTCCCGCCGCTGAGCGGAAACGTGACTGTCAGCGTGTTTGTGTTGGACCAGAACGACAACGCACCACTAGTCGTTTCCCCGCTGCCGAAGAACGGCACGGCGGCTACTGAGACGGTGCCGAGGTCGGCGGACGCAGGCTACCTCGTAGCAAAAATTACAGCACTGGACGCGGACGCCGGACAAAACTCTCGCCTCTCGTACCAAGTGCTGCACGCCACTGACCCGGGGCTTTTCAGCATCGCGCTTTACACGGGTGAAATTCGGACCATCCGCCGCTTTGTAGACAAAGACGCCACAAGGCACAGACTCGTTATACTGGTCAAGGACAATGGGCAACCCTCTCTATCGGCCACCGTATCCCTCATTCTGACGCTAGTGGACGGCGTGCCGGAGTCGCTGTCAGACCTGGATGACCATGCTCTCAGCCGCCGAGCGCCTTCTAACCTCGCCCTCTATCTGATCGTCTCGCTGAGTGTGGTATCGCTCATCTTCCTAGTAGCCATCATCGTACTGGCGGCACTGAAGTGCTACAAAGACCGGGACTGTCCTGGAGGTTTCGGTCTGTCCTCTATTGGTGCTGCGTGCTGCACTCTCGAATCCGAGCCGCCCGCCGAAGCATGCAAAAAGTCCAACTTGAATCTGCAGATTTCAACCGGGACGAAGGTGCCCACGAACTGTGTGGAGAGCAGTACCGGAACCACGGCTCAGAACTACTGCTACAAGGTGTGCCTAACACCCGAATCAGCCAAGAGTGACTTCATGTTCATGAAGTCGTACAGTCCGAGCACGCCGAGAAATAACGCGGCTAAAGAGGCTGAAAATCTGGCGTGGAGCTCACAGAGCCGCGGCCCTTCAGCGAATAACGGAGCGACAACTCCTAACGAGTTAAAACAAGACAATACTAACTGGGCTCTTACCAAGAACCAAACTTCAACTTTGAAAAgGATGATCTCTGTGATGGATTTTCAGTTATAACTCAATTAATATGGATGGCACCCTCATGAGGAAGGTCATGCAGACTGATTCTGAAAACTATGTAAGTCCAGTGGCTGCAGGACAGTA
>XM_034307263.1
TTCACCACATCTGGGGTAAGTTGAGCCAAAACGATTTGATCTGAATGCAGAATTATTGCAGAAGATCTACTACATTTTAAGGATTTTGGGCATAAACGAGATGGATCAAGGGCTCGAGAGGAGGCAATGGACATCAGCGTGGTCAGCTTTTCGCCTGCTTATGTGTATGTGCGCGCTGGACCGGGTGCTCGCCCAGATTCGCTACTCTGTTCTCGAGGAGCGCGAGCACGGCGCATTTGTCGGTAACATTGCGGAGGACTTAGGCTTGGATGTCGCCAGGTTATCCGCCAGGCGATTCCGCATAGTGTCCGGAGCTAGGAAACAGTATTTAGAGGTCAATTTGGAAAACGGGATTTTGTTTGTGAACGAGAAAATCGACCGAGAGGAGTTATGCGAACAGAGTCCGGTTTGTTTCTTGCACTTGCAGGTGGTCATTGAAAACCCACTGGAACTGTACCGAATGGAAGTTGAGATCATAGACGTTAACGACAACGCTCCAAGCTTTCCGTGGAGCGAGTTCAATCTAGAGATAACCGAGTCTGCCGCGCCGGGCTCACGGTTCCCGCTCGAGAGCGCGCAAGATCTAGACGCGGGATCCAACTCGCTCCGCTCCTACCTGCTGAGTGCTAACCAACACTTTGTGCTGGACGTGCAGACACGCAACGACGGGAGCAAGTTCGCAGAACTCGTGCTGGAGTCTCTCTTAGACCGGGAGAAGCAGAAAATGCACGAAATGGTCCTAACCGCTGTGGACGGCGGCTCTCCTCTGCGCTCGGGCACTGCTCAGATCATGGTTACAGTACTGGATGCGAACGATAATGTCCCTGTATTCGACAGATCCGTTTACCGGGTGAGCCTGGTGGAGAACGCACCGAGAGGAACGCTTGTGCTCAAGCTCAACGCCACGGATCTGGACGAAGGCTCTAACGGCGAGATCGTCTATTCATTCAGCGGCCATGCGCCCTTGAAAGTGCGCGAGCTGTTCAGTGTAGATTCTTTTTCGGGCGAAATTCGGGTGAAAGGGATTGTAGACTACGAAAAAGCCAGCGTCTACGAGCTCTATGTGCAGGCTAAAGACAAGGGTCCCTCTGCTGTGGCCGTGCACTGTAAAGTGCTTGTCGATATACTGGACGTGAACGACAACGCGCCAGAGGTCATCCTGACCTCTGTCTCCACACCTGTTCAGGAAGACGCGCCTCCGGGGACCGTGATAGCTGTGATCAGTGTCATGGATCGTGACTCCGGGGAAAACGGAGCAGTGGACTGTCAGATCCCCAGCCACGTCCCCTTTAGGCTTCACTCGTCCTTTAAAAACTACTACACTCTGGCGACTAGCGAATTTCTGGACAGAGAGTCGGTAGCCGAATACAACATCACTCTCACGGCGCGCGATTTAGGCTCACCACCGCTCTCCACCGGGAAAACTATTCATGTTCTTGTGTCGGATGTTAATGACAATCCTCCGCGCTTCCTTCAGCCGTCCTACACCGTCTATGTGACCGAGAATAACGCACCGGGCGCTTCCATTTGTTCTGTGAGCGCAGTTGATCCGGACTCTAACCAGAACGCTTATCTATCCTACTCTATTCTGGAGGGTCAGATAAGGGGCATGCCTGTGTCCACGTATGTTTCTATTAACTCGGACAATGGCAACATTTACGCTCTTCGCTCCTTCGACTACGAGCAGCTCCGCAACTTTCAGATCCGAGTTCAGGCGCGGGACGCCGGTTTCCCGCCGCTGAGCGGAAACGTGACTGTCAGCGTGTTTGTGTTGGACCAGAACGACAACGCACCACTAGTCGTTTCCCCGCTGCCGAAGAACGGCACGGCGGCTACTGAGACGGTGCCGAGGTCGGCGGACGCAGGCTACCTCGTAGCAAAAATTACAGCACTGGACGCGGACGCCGGACAAAACTCTCGCCTCTCGTACCAAGTGCTGCACGCCACTGACCCGGGGCTTTTCAGCATCGCGCTTTACACGGGTGAAATTCGGACCATCCGCCGCTTTGTAGACAAAGACGCCACAAGGCACAGACTCGTTATACTGGTCAAGGACAATGGGCAACCCTCTCTATCGGCCACCGTATCCCTCATTCTGACGCTAGTGGACGGCGTGCCGGAGTCGCTGTCAGACCTGGATGACCATGCTCTCAGCCGCCGAGCGCCTTCTAACCTCGCCCTCTATCTGATCGTCTCGCTGAGTGTGGTATCGCTCATCTTCCTAGTAGCCATCATCGTACTGGCGGCACTGAAGTGCTACAAAGACCGGGACTGTCCTGGAGGTTTCGGTCTGTCCTCTATTGGTGCTGCGTGCTGCACTCTCGAATCCGAGCCGCCCGCCGAAGCATGCAAAAAGTCCAACTTGAATCTGCAGATTTCAACCGGGACGAAGGTGCCCACGAACTGTGTGGAGAGCAGTACCGGAACCACGGCTCAGAACTACTGCTACAAGGTGTGCCTAACACCCGAATCAGCCAAGAGTGACTTCATGTTCATGAAGTCGTACAGTCCGAGCACGCCGAGAAATAACGCGGCTAAAGAGGCTGAAAATCTGGCGTGGAGCTCACAGAGCCGCGGCCCTTCAGCGAATAACGGAGCGACAACTCCTAACGAGTTAAAACAAGACAATACTAACTGGGCTCTTACCAAGAACCAAACTTCAACTTTGAAAAgTTATAACTCAATTAATATGGATGGCACCCTCATGAGGAAGGTCATGCAGACTGATTCTGAAAACTATGTAAGTCCAGTGGCTGCAGGACAGTACTGGACGTGGGGAACACGAATGAGAGAGTGCAAGATGTCTTCCCCTGTGACGGGCCTCCCTGAGCGGGCATGGACACCCCGCTACACCCCAACAAAAACTCCCCAACAGCAGCAGCCTTCAGGTCAGTCACATGGTCATCCTCCACCTGACTACCAACATAATGTCTACATCCCTGGGACTCCATCTGCCCTCTGTACTCTCCGGCCCAGTAATCGCAGTGAGCTGGATGTCCACAACACTTTCTCCACCTTTGGCAAGAAGCGCAAGTTCATCTCTCCCAGCAGTTATGACCTAAGGGATGAAACAGGTACTGAGGTCATCAATAATGACCTGTATAATGAATAGTGAAGAAGATTGGAGAGAGACTGCAACAGCATGCCAGATGATGGACAGAACATGTGGAGGGGAAGCAAATGTGGTGAAAGGAAAAAGCAGTGAAGCAGAGAAGAACCTAGAAGACCAGACATATTAATTGCAACCAAAGCAGAGCCTATTTATCCAAACCATACTGCTCTAATTTTACAGCTCCATTATGTTCCTGAACAGGGTGGTATACTTCCCATGACCCAATGTGCCCTTAGAGACACTTTTGGTTTATGTCTGtcatgtttgtatgtttgtggcACATAAAGCATGAGCCAGAATAAGAAAGCTTTAACCTCCAGTAGGGATTGGAAGAACTGGCTTAGTGTCAGAGATTAACATCTAACAGTTAAGGCCATCTAGATGAACCTGAACATAGAATGATAAATTAAGGAAGGTGGGAGGTCTGGTTACCATTTGTGCAATGTTTCACATATCTATGTCAGTtctccagtttttttttgcaaaaacatgATGGTAGGTGAATTGCCTAGTCTAAGATTTAAAAATGCCTCTATAAATAttcctaggtgtaaatgagtgttcCAGTATAAAAGCTCTAGATCTaccatgatcctgaccagaGAAAAGTGGTTACCCTGAGTAAGGATGAATGAgcgaatgaataaatgaaattaagaaAGGAAAATTGaagttataattttttattatacaacATGTTGATAGTGAACAGACTAATGATTTGGTTTACACTGAttacactcttaggaaaaaaaaaacctaaaggattctttgtttatttatgaaagGTTCTATGCAGACCCTTACAACCTCATTGTTCCAATCAGAAAGGGCTCCAAGCAGAACTAATGGAAGCTAAGAAACTTTGAAGAGCTCAACAAAGTATCCTTAATGAACTTATGAGGGggtctttttttctaagagtgtagttTATTCTTCTGTGTGAATAATGGGCTGAGGAATCACTTACTACTGTTTTGTTAGGACAACTTGGTGCATAGTTCAAAGATATGAAGGTCAATGGTAACAAACAGCAACAGTGAATCACATTGACTCcatgccattattattattattattattattattattatgctacaATTTTTGACAATCATATTAGGTAAACTGTGAGCATTACATATCCTTTGGCCACAGTGTGAATTTTCTGTCTTAGCAGAATCATCAGGCCATAGCCTTGCATTGATTGGTTGCTCAGTTAAAGAGGTGAATCAGTCTAACATGGTTATTGTTCAGTGAACAACATGTACAATACTAATATGTATGCAAACTGTGTAACTGACTCACGGCGTCTAGCGCAGTATATCACTGTATAAATTctgaaaataaagtatttttttctgagtATAATAGACTATGtctattataaattata

Function

symbol description
si:ch73-233f7.1 Predicted to enable calcium ion binding activity. Predicted to act upstream of or within homophilic cell adhesion via plasma membrane adhesion molecules and nervous system development. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to several human genes including PCDHGA1 (protocadherin gamma subfamily A, 1).

NR:

description
protocadherin beta-16-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173183 False 2271 TUCP 0.40 3 10543875 10547792
XM_026919795.2 True 4759 mRNA 0.48 4 10539277 10547929
XM_026919796.2 False 3045 mRNA 0.53 3 10539277 10545201
XM_034307263.1 False 4505 mRNA 0.48 5 10537251 10547929

Neighbor

gene id symbol gene type direction distance location
fgf18a fgf18a,LOC108274431,LOC103029481,LOC108430953,LOC105893086,LOC107747128,LOC107660900 coding upstream 11341 10508813 ~ 10525910 (+)
fbxw11a fbxw11a,fbxw11,LOC108275024,LOC108430955,LOC105893085,LOC107655672,LOC107588312,LOC107660901,LOC107754486,LOC107747095 coding upstream 65972 10452347 ~ 10471279 (+)
etf1a etf1,LOC108275025,LOC108430956 coding upstream 89039 10434947 ~ 10448212 (+)
bicc2 LOC108274692 coding upstream 518318 9997288 ~ 10018933 (+)
ndst1a ndst1,LOC108274691,LOC108430959,LOC102795901 coding upstream 550836 9918102 ~ 9986415 (+)
pcdhb LOC108275060,LOC108430951,LOC107754491,LOC107747094,LOC107596358 coding downstream 7371 10555300 ~ 10557826 (+)
LOC117598004 LOC107596395,LOC108274580 coding downstream 10401 10558330 ~ 10560166 (+)
LOC117598040 LOC107596395,LOC107660898,LOC108275059,LOC106596699 coding downstream 14134 10562063 ~ 10567099 (+)
LOC117598002 LOC108275059,LOC107660898 coding downstream 19624 10567553 ~ 10573096 (+)
LOC117598003 LOC108275059,LOC107754490,LOC107660898 coding downstream 25690 10573619 ~ 10576056 (+)
G146168 NA non-coding upstream 10393 10526543 ~ 10526858 (+)
G146141 NA non-coding upstream 86228 10450676 ~ 10451023 (+)
G145966 NA non-coding upstream 325756 10208004 ~ 10211495 (+)
LOC113530164 NA non-coding upstream 347058 10170715 ~ 10190193 (+)
G145950 NA non-coding upstream 433063 10103985 ~ 10104188 (+)
LOC113529600 NA non-coding downstream 207980 10755909 ~ 10758807 (+)
G146322 diaph1,LOC107754500,LOC107660904,LOC107588363,LOC107747105 non-coding downstream 347812 10895741 ~ 10896384 (+)
G146308 NA non-coding downstream 468166 11016095 ~ 11017354 (+)
G146377 NA non-coding downstream 503287 11051216 ~ 11051420 (+)
G146380 NA non-coding downstream 505238 11053167 ~ 11053425 (+)
G145233 LOC107676291 other upstream 1694985 8841476 ~ 8842266 (+)
gabra6a gabra6,LOC108275227,LOC107554706,LOC107684829 other upstream 3070699 7447870 ~ 7466552 (+)
trnaw-cca_12 NA other upstream 3580735 6956445 ~ 6956516 (+)
trnaw-cca_11 NA other upstream 3584378 6952802 ~ 6952873 (+)
trnaw-cca_10 NA other upstream 3585829 6951072 ~ 6951422 (+)
LOC113529865 LOC108275059,LOC107660898,LOC106604817 other downstream 6437 10554366 ~ 10595601 (+)
hrh2a LOC108274475 other downstream 747199 11295128 ~ 11306318 (+)
atp6v0e1 va0e1,atp6v0e1,LOC106612155 other downstream 1047570 11595499 ~ 11597970 (+)
G147542 NA other downstream 2368990 12916919 ~ 12917254 (+)
zgc:172145 LOC108275003 other downstream 2801394 13349323 ~ 13353262 (+)

Expression


Co-expression Network