G147542


Basic Information

Item Value
gene id G147542
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047603.1
NCBI id CM018549.1
chromosome length 29458963
location 12916919 ~ 12917254 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU174750
tggagttgatatcaggtattgagttggcatttggcagctgttcgactggagctaccaatatgaagtccaaggagatctcaatgcaagtgaaggaggccatcattaggctgaaaaaacaacataaatctatgagAGAGATAgtaaaaaccttaggtgtggccaaatcaacagttgggtacattcttaaaaagaaagaaagcactggtgagctcaacaacattgaaaggcctggaagaccatggaagacaactaaagtggatgatcgcagaatcctttccttggtgaagaaaaaccgcttcacaacatcaacagaagtcaagaatactctggagaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174750 True 336 TUCP 0.42 1 12916919 12917254

Neighbor

gene id symbol gene type direction distance location
phlda2 phlda2,phla2 coding upstream 53364 12862501 ~ 12863555 (+)
nap1l4a nap1l4a,LOC108275311,LOC108439256,LOC107675283 coding upstream 66526 12837011 ~ 12850393 (+)
si:ch211-236l14.4 LOC108274486,LOC108439252 coding upstream 110466 12781288 ~ 12806453 (+)
igf2b LOC100304637,LOC108439251 coding upstream 232098 12680740 ~ 12684821 (+)
th th,LOC108274586 coding upstream 242338 12666989 ~ 12674581 (+)
dusp8a dusp8a,LOC108274976,LOC107675452,LOC107675267,LOC107553852,LOC107744185,LOC107549289,LOC107758748 coding downstream 205889 13123143 ~ 13161929 (+)
mob2a mob2,LOC108274974,LOC108411394 coding downstream 253441 13170695 ~ 13215991 (+)
myod1 myod1,LOC107758742 coding downstream 438979 13356233 ~ 13358154 (+)
pdcd2l pdcd2l coding downstream 548019 13465273 ~ 13470743 (+)
banp banp,LOC107742045 coding downstream 555930 13473184 ~ 13522795 (+)
G147479 NA non-coding upstream 84853 12831828 ~ 12832066 (+)
G147472 NA non-coding upstream 105590 12810522 ~ 12811329 (+)
G147438 NA non-coding upstream 225497 12690927 ~ 12691422 (+)
G147436 NA non-coding upstream 226440 12690201 ~ 12690479 (+)
G146883 NA non-coding upstream 816353 12092180 ~ 12100566 (+)
G147554 NA non-coding downstream 15627 12932881 ~ 12937704 (+)
G147560 ptprj,LOC108274725 non-coding downstream 21343 12938597 ~ 12995058 (+)
G147558 ptprj,LOC108274725 non-coding downstream 22152 12939406 ~ 12943061 (+)
G147582 NA non-coding downstream 51893 12969147 ~ 13073808 (+)
G147557 ptprj,LOC108274725 non-coding downstream 76934 12994188 ~ 13098414 (+)
atp6v0e1 va0e1,atp6v0e1,LOC106612155 other upstream 1318949 11595499 ~ 11597970 (+)
hrh2a LOC108274475 other upstream 1610601 11295128 ~ 11306318 (+)
LOC113529865 LOC108275059,LOC107660898,LOC106604817 other upstream 2321318 10554366 ~ 10595601 (+)
si:ch73-233f7.1 si:ch73-233f7.1,LOC108274507,LOC107660897,LOC107588310,LOC107596359,LOC107754489,LOC108430952 other upstream 2368990 10537251 ~ 10547929 (+)
G145233 LOC107676291 other upstream 4074653 8841476 ~ 8842266 (+)
zgc:172145 LOC108275003 other downstream 432069 13349323 ~ 13353262 (+)
prr33 prr33,LOC108428828,LOC107595228,LOC107742059,LOC107675453 other downstream 455618 13372872 ~ 13389196 (+)
ces2b LOC108275184 other downstream 844080 13761334 ~ 13776871 (+)
fanci fanci,LOC107673243,LOC107670230,LOC107564606 other downstream 873719 13790973 ~ 13829331 (+)
slc5a12 slc5a12 other downstream 2646052 15563306 ~ 15652684 (+)

Expression


Co-expression Network