Gene
RNA
| Item | Value |
|---|---|
| gene id | zgc:172145 |
| gene name | LOC108275003 |
| gene type | misc |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047603.1 |
| NCBI id | CM018549.1 |
| chromosome length | 29458963 |
| location | 13349323 ~ 13353262 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| description |
|---|
| ferritin, heavy subunit-like |
| id | name | namespace |
|---|---|---|
| GO:0006879 | cellular iron ion homeostasis | biological_process |
| GO:0006826 | iron ion transport | biological_process |
| GO:0008199 | ferric iron binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU175114 | False | 1079 | TUCP | 0.45 | 3 | 13349326 | 13353253 |
| XM_026918818.2 | True | 1134 | mRNA | 0.45 | 3 | 13349323 | 13353262 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mob2a | mob2,LOC108274974,LOC108411394 | coding | upstream | 133332 | 13170695 ~ 13215991 (+) |
| dusp8a | dusp8a,LOC108274976,LOC107675452,LOC107675267,LOC107553852,LOC107744185,LOC107549289,LOC107758748 | coding | upstream | 187394 | 13123143 ~ 13161929 (+) |
| phlda2 | phlda2,phla2 | coding | upstream | 485768 | 12862501 ~ 12863555 (+) |
| nap1l4a | nap1l4a,LOC108275311,LOC108439256,LOC107675283 | coding | upstream | 498930 | 12837011 ~ 12850393 (+) |
| si:ch211-236l14.4 | LOC108274486,LOC108439252 | coding | upstream | 542870 | 12781288 ~ 12806453 (+) |
| myod1 | myod1,LOC107758742 | coding | downstream | 2971 | 13356233 ~ 13358154 (+) |
| pdcd2l | pdcd2l | coding | downstream | 112011 | 13465273 ~ 13470743 (+) |
| banp | banp,LOC107742045 | coding | downstream | 119922 | 13473184 ~ 13522795 (+) |
| LOC113529436 | znf469 | coding | downstream | 170360 | 13523622 ~ 13712474 (+) |
| LOC113529751 | rassf8,LOC108428816 | coding | downstream | 388698 | 13741960 ~ 13757527 (+) |
| LOC117597924 | NA | non-coding | upstream | 16279 | 13329642 ~ 13333044 (+) |
| G147641 | NA | non-coding | upstream | 161039 | 13187691 ~ 13188284 (+) |
| G147630 | NA | non-coding | upstream | 184533 | 13164576 ~ 13164790 (+) |
| G147557 | ptprj,LOC108274725 | non-coding | upstream | 250909 | 12994188 ~ 13098414 (+) |
| G147602 | NA | non-coding | upstream | 258818 | 13070255 ~ 13090505 (+) |
| G147784 | NA | non-coding | downstream | 6773 | 13360035 ~ 13371776 (+) |
| G147787 | LOC108274999 | non-coding | downstream | 37055 | 13390317 ~ 13390708 (+) |
| G147792 | NA | non-coding | downstream | 38836 | 13392098 ~ 13392749 (+) |
| G147814 | NA | non-coding | downstream | 45562 | 13398824 ~ 13399650 (+) |
| G147791 | NA | non-coding | downstream | 60230 | 13413492 ~ 13432584 (+) |
| G147542 | NA | other | upstream | 432069 | 12916919 ~ 12917254 (+) |
| atp6v0e1 | va0e1,atp6v0e1,LOC106612155 | other | upstream | 1751353 | 11595499 ~ 11597970 (+) |
| hrh2a | LOC108274475 | other | upstream | 2043005 | 11295128 ~ 11306318 (+) |
| LOC113529865 | LOC108275059,LOC107660898,LOC106604817 | other | upstream | 2753722 | 10554366 ~ 10595601 (+) |
| si:ch73-233f7.1 | si:ch73-233f7.1,LOC108274507,LOC107660897,LOC107588310,LOC107596359,LOC107754489,LOC108430952 | other | upstream | 2801394 | 10537251 ~ 10547929 (+) |
| prr33 | prr33,LOC108428828,LOC107595228,LOC107742059,LOC107675453 | other | downstream | 19610 | 13372872 ~ 13389196 (+) |
| ces2b | LOC108275184 | other | downstream | 408072 | 13761334 ~ 13776871 (+) |
| fanci | fanci,LOC107673243,LOC107670230,LOC107564606 | other | downstream | 437711 | 13790973 ~ 13829331 (+) |
| slc5a12 | slc5a12 | other | downstream | 2210044 | 15563306 ~ 15652684 (+) |
| svip | svip | other | downstream | 2368016 | 15721278 ~ 15725091 (+) |
